Package picard.sam
|
100%
successful |
Classes
| Class | Tests | Failures | Ignored | Duration | Success rate |
|---|---|---|---|---|---|
| AbstractAlignmentMergerTest | 184 | 0 | 0 | 0.160s | 100% |
| AddCommentsToBamTest | 3 | 0 | 0 | 0.035s | 100% |
| AddOATagTest | 4 | 0 | 0 | 0.023s | 100% |
| BuildBamIndexTest | 3 | 0 | 0 | 0.041s | 100% |
| CleanSamTest | 12 | 0 | 0 | 0.131s | 100% |
| CompareSAMsTest | 58 | 0 | 0 | 0.665s | 100% |
| CramCompatibilityTest | 48 | 0 | 0 | 4.898s | 100% |
| CreateSequenceDictionaryTest | 7 | 0 | 0 | 0.103s | 100% |
| DownsampleSamTest | 84 | 0 | 0 | 12.236s | 100% |
| DuplicationMetricsTest | 7 | 0 | 0 | 0.003s | 100% |
| FastqToSamTest | 63 | 0 | 0 | 1.628s | 100% |
| FilterSamReadsTest | 48 | 0 | 0 | 0.807s | 100% |
| FixMateInformationTest | 2 | 0 | 0 | 0.004s | 100% |
| GatherBamFilesTest | 2 | 0 | 0 | 0.025s | 100% |
| MergeBamAlignmentTest | 76 | 0 | 0 | 0.921s | 100% |
| MergeSamFilesTest | 1 | 0 | 0 | 0.016s | 100% |
| PipedDataTest | 3 | 0 | 0 | 3.686s | 100% |
| PositionBasedDownsampleSamTest | 20 | 0 | 0 | 1.622s | 100% |
| ReorderSamTest | 24 | 0 | 0 | 0.598s | 100% |
| RevertSamTest | 32 | 0 | 0 | 0.321s | 100% |
| SamFormatConverterTest | 6 | 0 | 0 | 0.062s | 100% |
| SamToFastqTest | 24 | 0 | 0 | 0.180s | 100% |
| SamToFastqWithTagsTest | 13 | 0 | 0 | 0.084s | 100% |
| SetNmMdAndUqTagsTest | 6 | 0 | 0 | 0.033s | 100% |
| SortSamTest | 1 | 0 | 0 | 0.013s | 100% |
| SplitSamByLibraryTest | 3 | 0 | 0 | 0.003s | 100% |
| SplitSamByNumberOfReadsTest | 8 | 0 | 0 | 0.124s | 100% |
| ValidateSamFileTest | 9 | 0 | 0 | 0.065s | 100% |
| ViewSamTest | 2 | 0 | 0 | 0.005s | 100% |