FragmentIterator

All Superinterfaces:: Fragment

All Known Subinterfaces:: Read, ReadIterator

public interface FragmentIterator extends Fragment

Iterates across a list of Fragments

Method Summary

Modifier and Type

Method

Description

boolean

nextFragment()

Advance to next Fragment

Methods inherited from interface ngs.Fragment
getFragmentBases, getFragmentBases, getFragmentBases, getFragmentId, getFragmentQualities, getFragmentQualities, getFragmentQualities, isAligned, isPaired

Method Details
- nextFragment
  
  boolean nextFragment() throws ErrorMsg
  
  Advance to next Fragment
  
  Returns:
  
  false if no more Fragments are available.
  
  Throws:
  
  ErrorMsg - if more Fragments should be available, but could not be accessed.