Standard error
[Thu Apr 24 13:18:08 EDT 2025] MergeVcfs --INPUT testdata/picard/vcf/CEUTrio-indels-dissimilar-contigs.vcf --INPUT testdata/picard/vcf/CEUTrio-snps.vcf --OUTPUT /dev/null/blah --CREATE_INDEX false --VERBOSITY INFO --QUIET false --VALIDATION_STRINGENCY STRICT --COMPRESSION_LEVEL 5 --MAX_RECORDS_IN_RAM 2279706 --CREATE_MD5_FILE false --help false --version false --showHidden false --USE_JDK_DEFLATER false --USE_JDK_INFLATER false
[Thu Apr 24 13:18:08 EDT 2025] Executing as root@lovelace on Linux 6.1.0-28-amd64 amd64; OpenJDK 64-Bit Server VM 17.0.13+11-Debian-2deb12u1; Deflater: Intel; Inflater: Intel; Provider GCS is available; Picard version: Version:null
[Thu Apr 24 13:18:08 EDT 2025] picard.vcf.MergeVcfs done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1073741824
To get help, see http://broadinstitute.github.io/picard/index.html#GettingHelp
[Thu Apr 24 13:18:08 EDT 2025] MergeVcfs --INPUT testdata/picard/vcf/CEUTrio-indels-bad-samples.vcf --INPUT testdata/picard/vcf/CEUTrio-snps.vcf --OUTPUT /dev/null --VERBOSITY INFO --QUIET false --VALIDATION_STRINGENCY STRICT --COMPRESSION_LEVEL 5 --MAX_RECORDS_IN_RAM 2279706 --CREATE_INDEX true --CREATE_MD5_FILE false --help false --version false --showHidden false --USE_JDK_DEFLATER false --USE_JDK_INFLATER false
[Thu Apr 24 13:18:08 EDT 2025] Executing as root@lovelace on Linux 6.1.0-28-amd64 amd64; OpenJDK 64-Bit Server VM 17.0.13+11-Debian-2deb12u1; Deflater: Intel; Inflater: Intel; Provider GCS is available; Picard version: Version:null
[Thu Apr 24 13:18:08 EDT 2025] picard.vcf.MergeVcfs done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1073741824
To get help, see http://broadinstitute.github.io/picard/index.html#GettingHelp
[Thu Apr 24 13:18:08 EDT 2025] MergeVcfs --INPUT testdata/picard/vcf/CEUTrio-indels-no-contigs.vcf --INPUT testdata/picard/vcf/CEUTrio-snps.vcf --OUTPUT /dev/null --VERBOSITY INFO --QUIET false --VALIDATION_STRINGENCY STRICT --COMPRESSION_LEVEL 5 --MAX_RECORDS_IN_RAM 2279706 --CREATE_INDEX true --CREATE_MD5_FILE false --help false --version false --showHidden false --USE_JDK_DEFLATER false --USE_JDK_INFLATER false
[Thu Apr 24 13:18:08 EDT 2025] Executing as root@lovelace on Linux 6.1.0-28-amd64 amd64; OpenJDK 64-Bit Server VM 17.0.13+11-Debian-2deb12u1; Deflater: Intel; Inflater: Intel; Provider GCS is available; Picard version: Version:null
[Thu Apr 24 13:18:08 EDT 2025] picard.vcf.MergeVcfs done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1073741824
To get help, see http://broadinstitute.github.io/picard/index.html#GettingHelp
[Thu Apr 24 13:18:08 EDT 2025] MergeVcfs --INPUT testdata/picard/vcf/CEUTrio-indels.vcf --INPUT testdata/picard/vcf/CEUTrio-snps.vcf --OUTPUT /tmp/merge-indels-snps-test-output.7904430846830519332.vcf --CREATE_INDEX false --VERBOSITY INFO --QUIET false --VALIDATION_STRINGENCY STRICT --COMPRESSION_LEVEL 5 --MAX_RECORDS_IN_RAM 2279706 --CREATE_MD5_FILE false --help false --version false --showHidden false --USE_JDK_DEFLATER false --USE_JDK_INFLATER false
[Thu Apr 24 13:18:08 EDT 2025] Executing as root@lovelace on Linux 6.1.0-28-amd64 amd64; OpenJDK 64-Bit Server VM 17.0.13+11-Debian-2deb12u1; Deflater: Intel; Inflater: Intel; Provider GCS is available; Picard version: Version:null
[Thu Apr 24 13:18:08 EDT 2025] picard.vcf.MergeVcfs done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1073741824
[Thu Apr 24 13:18:08 EDT 2025] MergeVcfs --INPUT testdata/picard/vcf/CEUTrio-random-scatter-0.vcf --INPUT testdata/picard/vcf/CEUTrio-random-scatter-1.vcf --INPUT testdata/picard/vcf/CEUTrio-random-scatter-2.vcf --INPUT testdata/picard/vcf/CEUTrio-random-scatter-3.vcf --INPUT testdata/picard/vcf/CEUTrio-random-scatter-4.vcf --INPUT testdata/picard/vcf/CEUTrio-random-scatter-5.vcf --OUTPUT /tmp/random-scatter-test-output.2520679813721716971.vcf --CREATE_INDEX false --VERBOSITY INFO --QUIET false --VALIDATION_STRINGENCY STRICT --COMPRESSION_LEVEL 5 --MAX_RECORDS_IN_RAM 2279706 --CREATE_MD5_FILE false --help false --version false --showHidden false --USE_JDK_DEFLATER false --USE_JDK_INFLATER false
[Thu Apr 24 13:18:08 EDT 2025] Executing as root@lovelace on Linux 6.1.0-28-amd64 amd64; OpenJDK 64-Bit Server VM 17.0.13+11-Debian-2deb12u1; Deflater: Intel; Inflater: Intel; Provider GCS is available; Picard version: Version:null
[Thu Apr 24 13:18:08 EDT 2025] picard.vcf.MergeVcfs done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1073741824
[Thu Apr 24 13:18:08 EDT 2025] MergeVcfs --INPUT testdata/picard/vcf/noSeqDict.vcf --OUTPUT /dev/null --SEQUENCE_DICTIONARY testdata/picard/reference/test.dict --CREATE_INDEX false --VERBOSITY INFO --QUIET false --VALIDATION_STRINGENCY STRICT --COMPRESSION_LEVEL 5 --MAX_RECORDS_IN_RAM 2279706 --CREATE_MD5_FILE false --help false --version false --showHidden false --USE_JDK_DEFLATER false --USE_JDK_INFLATER false
[Thu Apr 24 13:18:08 EDT 2025] Executing as root@lovelace on Linux 6.1.0-28-amd64 amd64; OpenJDK 64-Bit Server VM 17.0.13+11-Debian-2deb12u1; Deflater: Intel; Inflater: Intel; Provider GCS is available; Picard version: Version:null
[Thu Apr 24 13:18:08 EDT 2025] picard.vcf.MergeVcfs done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1073741824
[Thu Apr 24 13:18:08 EDT 2025] MergeVcfs --INPUT testdata/picard/vcf/mini.vcf --OUTPUT /tmp/result5034837009056179975.vcf --COMMENT This is a comment --VERBOSITY INFO --QUIET false --VALIDATION_STRINGENCY STRICT --COMPRESSION_LEVEL 5 --MAX_RECORDS_IN_RAM 2279706 --CREATE_INDEX true --CREATE_MD5_FILE false --help false --version false --showHidden false --USE_JDK_DEFLATER false --USE_JDK_INFLATER false
[Thu Apr 24 13:18:08 EDT 2025] Executing as root@lovelace on Linux 6.1.0-28-amd64 amd64; OpenJDK 64-Bit Server VM 17.0.13+11-Debian-2deb12u1; Deflater: Intel; Inflater: Intel; Provider GCS is available; Picard version: Version:null
[Thu Apr 24 13:18:08 EDT 2025] picard.vcf.MergeVcfs done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1073741824