Class picard.vcf.MakeVcfSampleNameMapTest
Tests
| Test |
Duration |
Result |
| testFailMultiSampleVcf |
0.001s |
passed |
| testMakeMap |
0.003s |
passed |
Standard error
[Thu Apr 24 13:18:10 EDT 2025] MakeVcfSampleNameMap --INPUT testdata/picard/vcf/mini.vcf --OUTPUT testdata/picard/vcf/MakeVcfSampleNameMap/not-used --VERBOSITY INFO --QUIET false --VALIDATION_STRINGENCY STRICT --COMPRESSION_LEVEL 5 --MAX_RECORDS_IN_RAM 2279706 --CREATE_INDEX false --CREATE_MD5_FILE false --help false --version false --showHidden false --USE_JDK_DEFLATER false --USE_JDK_INFLATER false
[Thu Apr 24 13:18:10 EDT 2025] Executing as root@lovelace on Linux 6.1.0-28-amd64 amd64; OpenJDK 64-Bit Server VM 17.0.13+11-Debian-2deb12u1; Deflater: Intel; Inflater: Intel; Provider GCS is available; Picard version: Version:null
[Thu Apr 24 13:18:10 EDT 2025] picard.vcf.MakeVcfSampleNameMap done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1073741824
To get help, see http://broadinstitute.github.io/picard/index.html#GettingHelp
[Thu Apr 24 13:18:10 EDT 2025] MakeVcfSampleNameMap --INPUT testdata/picard/vcf/MakeVcfSampleNameMap/NA12878.vcf --INPUT testdata/picard/vcf/MakeVcfSampleNameMap/NA12891.vcf --INPUT testdata/picard/vcf/MakeVcfSampleNameMap/NA12892.vcf --OUTPUT /tmp/MakeMap4882644406633749725test.sample_map --VERBOSITY INFO --QUIET false --VALIDATION_STRINGENCY STRICT --COMPRESSION_LEVEL 5 --MAX_RECORDS_IN_RAM 2279706 --CREATE_INDEX false --CREATE_MD5_FILE false --help false --version false --showHidden false --USE_JDK_DEFLATER false --USE_JDK_INFLATER false
[Thu Apr 24 13:18:10 EDT 2025] Executing as root@lovelace on Linux 6.1.0-28-amd64 amd64; OpenJDK 64-Bit Server VM 17.0.13+11-Debian-2deb12u1; Deflater: Intel; Inflater: Intel; Provider GCS is available; Picard version: Version:null
[Thu Apr 24 13:18:10 EDT 2025] picard.vcf.MakeVcfSampleNameMap done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1073741824