| Test |
Duration |
Result |
| testAllelesToString[0]([A*, G], [A, G]) |
0s |
passed |
| testAllelesToString[10]([TT*, .], [TT, .]) |
0s |
passed |
| testAllelesToString[1]([A, G], [A, G]) |
0s |
passed |
| testAllelesToString[2]([T*, T], [T, T]) |
0s |
passed |
| testAllelesToString[3]([*, G], [*, G]) |
0s |
passed |
| testAllelesToString[4]([ATG*, G], [ATG, G]) |
0s |
passed |
| testAllelesToString[5]([A*, GGGTGT], [A, GGGTGT]) |
0s |
passed |
| testAllelesToString[6]([A, A], [A, A]) |
0s |
passed |
| testAllelesToString[7]([., .], [., .]) |
0s |
passed |
| testAllelesToString[8]([*, A*], [*, A]) |
0s |
passed |
| testAllelesToString[9]([A*, .], [A, .]) |
0s |
passed |
| testSwapRefAlt[0]([VC test1 @ chr1:2 Q. of type=SNP alleles=[A*, C] attr={} GT=[] filters=, [VC test1 @ chr1:2 Q. of type=SNP alleles=[C*, A] attr={SwappedAlleles=true} GT=[] filters=) |
0s |
passed |
| testSwapRefAlt[1]([VC test2 @ chr1:2 Q. of type=SNP alleles=[A*, C] attr={AF=0.2} GT=[] filters=, [VC test2 @ chr1:2 Q. of type=SNP alleles=[C*, A] attr={AF=0.8, SwappedAlleles=true} GT=[] filters=) |
0.001s |
passed |
| testSwapRefAlt[2]([VC test3 @ chr1:2 Q. of type=SNP alleles=[A*, C] attr={AF=.} GT=[] filters=, [VC test3 @ chr1:2 Q. of type=SNP alleles=[C*, A] attr={AF=., SwappedAlleles=true} GT=[] filters=) |
0s |
passed |
| testSwapRefAlt[3]([VC test4 @ chr1:2 Q. of type=SNP alleles=[A*, C] attr={AF=1} GT=[] filters=, [VC test4 @ chr1:2 Q. of type=SNP alleles=[C*, A] attr={AF=0.0, SwappedAlleles=true} GT=[] filters=) |
0s |
passed |
| testSwapRefAlt[4]([VC test5 @ chr1:2 Q. of type=SNP alleles=[A*, C] attr={AF=1, MAX_AF=1} GT=[] filters=, [VC test5 @ chr1:2 Q. of type=SNP alleles=[C*, A] attr={AF=0.0, SwappedAlleles=true} GT=[] filters=) |
0s |
passed |
| testSwapRefAlt[5]([VC test5 @ chr1:2 Q. of type=SNP alleles=[A*, C] attr={AF=1, AF_MAX_shouldnt_be_dropped=1, MAX_AF=1} GT=[] filters=, [VC test5 @ chr1:2 Q. of type=SNP alleles=[C*, A] attr={AF=0.0, AF_MAX_shouldnt_be_dropped=1, SwappedAlleles=true} GT=[] filters=) |
0s |
passed |