Class picard.util.IntervalListToBedTest

all > picard.util > IntervalListToBedTest
3

tests
0

failures
0

ignored
0.018s

duration
100%

successful

Tests

Test Duration Result
testConvertToBed[0](testdata/picard/util/interval_list_to_bed_test.interval_list, testdata/picard/util/interval_list_to_bed_test.bed, true) 0.012s passed
testConvertToBed[1](testdata/picard/util/unsorted_interval_list_to_bed_test.interval_list, testdata/picard/util/interval_list_to_bed_test.bed, true) 0.004s passed
testConvertToBed[2](testdata/picard/util/interval_list_to_bed_test.interval_list, testdata/picard/util/no_sort_interval_list_to_bed_test.bed, false) 0.002s passed

Standard error

[Thu Apr 24 13:18:03 EDT 2025] IntervalListToBed --INPUT /mounts/lovelace/software/picard/picard/testdata/picard/util/interval_list_to_bed_test.interval_list --OUTPUT /tmp/interval_list_to_bed_test_output3232329451804184559.bed --SCORE 333 --SORT true --VERBOSITY INFO --QUIET false --VALIDATION_STRINGENCY STRICT --COMPRESSION_LEVEL 5 --MAX_RECORDS_IN_RAM 2279706 --CREATE_INDEX false --CREATE_MD5_FILE false --help false --version false --showHidden false --USE_JDK_DEFLATER false --USE_JDK_INFLATER false
[Thu Apr 24 13:18:03 EDT 2025] Executing as root@lovelace on Linux 6.1.0-28-amd64 amd64; OpenJDK 64-Bit Server VM 17.0.13+11-Debian-2deb12u1; Deflater: Intel; Inflater: Intel; Provider GCS is available; Picard version: Version:null
[Thu Apr 24 13:18:03 EDT 2025] picard.util.IntervalListToBed done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1073741824
[Thu Apr 24 13:18:03 EDT 2025] IntervalListToBed --INPUT /mounts/lovelace/software/picard/picard/testdata/picard/util/unsorted_interval_list_to_bed_test.interval_list --OUTPUT /tmp/interval_list_to_bed_test_output7422238177595345056.bed --SCORE 333 --SORT true --VERBOSITY INFO --QUIET false --VALIDATION_STRINGENCY STRICT --COMPRESSION_LEVEL 5 --MAX_RECORDS_IN_RAM 2279706 --CREATE_INDEX false --CREATE_MD5_FILE false --help false --version false --showHidden false --USE_JDK_DEFLATER false --USE_JDK_INFLATER false
[Thu Apr 24 13:18:03 EDT 2025] Executing as root@lovelace on Linux 6.1.0-28-amd64 amd64; OpenJDK 64-Bit Server VM 17.0.13+11-Debian-2deb12u1; Deflater: Intel; Inflater: Intel; Provider GCS is available; Picard version: Version:null
[Thu Apr 24 13:18:03 EDT 2025] picard.util.IntervalListToBed done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1073741824
[Thu Apr 24 13:18:03 EDT 2025] IntervalListToBed --INPUT /mounts/lovelace/software/picard/picard/testdata/picard/util/interval_list_to_bed_test.interval_list --OUTPUT /tmp/interval_list_to_bed_test_output14780368149439111355.bed --SCORE 333 --SORT false --VERBOSITY INFO --QUIET false --VALIDATION_STRINGENCY STRICT --COMPRESSION_LEVEL 5 --MAX_RECORDS_IN_RAM 2279706 --CREATE_INDEX false --CREATE_MD5_FILE false --help false --version false --showHidden false --USE_JDK_DEFLATER false --USE_JDK_INFLATER false
[Thu Apr 24 13:18:03 EDT 2025] Executing as root@lovelace on Linux 6.1.0-28-amd64 amd64; OpenJDK 64-Bit Server VM 17.0.13+11-Debian-2deb12u1; Deflater: Intel; Inflater: Intel; Provider GCS is available; Picard version: Version:null
[Thu Apr 24 13:18:03 EDT 2025] picard.util.IntervalListToBed done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1073741824