Class picard.sam.util.ReadNameParserTests

19

tests

0

failures

0

ignored

0.006s

duration

100%

successful

Tests

Test Duration Result
testGetRapidDefaultReadNameRegexSplit 0s passed
testParseReadNameOK[0](RUNID:7:1203:2886:82292, 1203, 2886, 82292) 0s passed
testParseReadNameOK[1](RUNID:7:1203:2884:16834, 1203, 2884, 16834) 0s passed
testParseReadNameOverflow[0](RUNID:7:1203:2886:82292, 1203, 2886, 82292) 0s passed
testParseReadNameOverflow[1](RUNID:7:1203:2884:16834, 1203, 2884, 16834) 0s passed
testRapidParseInt 0.001s passed
testRapidParseIntFails 0.001s passed
testReadNameParsing[0]((?:.*:)?([0-9]+)[^:]*:([0-9]+)[^:]*:([0-9]+)[^:]*$, RUNID:123:000000000-ZZZZZ:1:1105:17981:23325, 1105, 17981, 23325, true) 0s passed
testReadNameParsing[10](<optimized capture of last three ':' separated fields as numeric values>, RUNID:7:1203:2884:16834, 1203, 2884, 16834, true) 0s passed
testReadNameParsing[1]((?:.*:)?([0-9]+)[^:]*:([0-9]+)[^:]*:([0-9]+)[^:]*$, RUNID:123:000000000-ZZZZZ:1:1109:22981:17995, 1109, 22981, 17995, true) 0s passed
testReadNameParsing[2]((?:.*:)?([0-9]+)[^:]*:([0-9]+)[^:]*:([0-9]+)[^:]*$, 1109:22981:17995, 1109, 22981, 17995, true) 0s passed
testReadNameParsing[3]((?:.*:)?([0-9]+)[^:]*:([0-9]+)[^:]*:([0-9]+)[^:]*$, RUNID:7:1203:2886:82292, 1203, 2886, 82292, true) 0s passed
testReadNameParsing[4]((?:.*:)?([0-9]+)[^:]*:([0-9]+)[^:]*:([0-9]+)[^:]*$, RUNID:7:1203:2884:16834, 1203, 2884, 16834, true) 0s passed
testReadNameParsing[5]((?:.*:)?([0-9]+)[^:]*:([0-9]+)[^:]*:([0-9]+)[^:]*$, 1109ABC:22981DEF:17995GHI, 1109, 22981, 17995, true) 0s passed
testReadNameParsing[6](<optimized capture of last three ':' separated fields as numeric values>, RUNID:123:000000000-ZZZZZ:1:1105:17981:23325, 1105, 17981, 23325, true) 0s passed
testReadNameParsing[7](<optimized capture of last three ':' separated fields as numeric values>, RUNID:123:000000000-ZZZZZ:1:1109:22981:17995, 1109, 22981, 17995, true) 0s passed
testReadNameParsing[8](<optimized capture of last three ':' separated fields as numeric values>, 1109:22981:17995, 1109, 22981, 17995, false) 0s passed
testReadNameParsing[9](<optimized capture of last three ':' separated fields as numeric values>, RUNID:7:1203:2886:82292, 1203, 2886, 82292, true) 0s passed
testSerializedReadNameParser 0.004s passed