Class picard.illumina.ReadStructureTest

93

tests

0

failures

0

ignored

0.004s

duration

100%

successful

Tests

Test Duration Result
testInvalidReadStructureFromList[0](, []) 0s passed
testInvalidReadStructureFromList[1](0T, [0T]) 0s passed
testInvalidReadStructureFromList[2](-1T, [-1T]) 0s passed
testInvalidReadStructureFromList[3](0S, [0S]) 0s passed
testInvalidReadStructureFromList[4](0M, [0M]) 0s passed
testInvalidReadStructureFromList[5](-1B, [-1B]) 0s passed
testInvalidReadStructureFromList[6](-1M, [-1M]) 0s passed
testInvalidReadStructureFromList[7](-66S1B, [-66S, 1B]) 0s passed
testInvalidReadStructureFromList[8](77T82B0S, [77T, 82B, 0S]) 0s passed
testInvalidReadStructureFromString[0](, []) 0s passed
testInvalidReadStructureFromString[10](SM, null) 0s passed
testInvalidReadStructureFromString[11](75TS, null) 0s passed
testInvalidReadStructureFromString[12](8*T, null) 0s passed
testInvalidReadStructureFromString[13](-66S1B, [-66S, 1B]) 0s passed
testInvalidReadStructureFromString[14](-0T5B8C, null) 0s passed
testInvalidReadStructureFromString[15](77T82B0S, [77T, 82B, 0S]) 0.001s passed
testInvalidReadStructureFromString[1](0T, [0T]) 0s passed
testInvalidReadStructureFromString[2](-1T, [-1T]) 0s passed
testInvalidReadStructureFromString[3](0S, [0S]) 0s passed
testInvalidReadStructureFromString[4](0M, [0M]) 0s passed
testInvalidReadStructureFromString[5](-1B, [-1B]) 0s passed
testInvalidReadStructureFromString[6](-1M, [-1M]) 0.001s passed
testInvalidReadStructureFromString[7](8C, null) 0s passed
testInvalidReadStructureFromString[8](B5, null) 0s passed
testInvalidReadStructureFromString[9](SS, null) 0s passed
testSubstructureToReadStructure[0](picard.illumina.parser.ReadStructure$Substructure@50036de4) 0s passed
testSubstructureToReadStructure[0](picard.illumina.parser.ReadStructure$Substructure@678b6fb7, 10T10T) 0s passed
testSubstructureToReadStructure[1](picard.illumina.parser.ReadStructure$Substructure@6ad950de, 10T10T) 0s passed
testSubstructureToReadStructure[1](picard.illumina.parser.ReadStructure$Substructure@6e3add92) 0s passed
testSubstructureToReadStructure[2](picard.illumina.parser.ReadStructure$Substructure@247e76b8, 10T8B10T) 0s passed
testSubstructureToReadStructure[2](picard.illumina.parser.ReadStructure$Substructure@3bcaff68) 0s passed
testSubstructureToReadStructure[3](picard.illumina.parser.ReadStructure$Substructure@3e8c8233, 10T8B5M10T) 0s passed
testSubstructureToReadStructure[3](picard.illumina.parser.ReadStructure$Substructure@3fd842df) 0s passed
testSubstructureToReadStructure[4](picard.illumina.parser.ReadStructure$Substructure@4d7014ba) 0s passed
testSubstructureToReadStructure[4](picard.illumina.parser.ReadStructure$Substructure@53b85e12, 10T8B10T) 0s passed
testSubstructureToReadStructure[5](picard.illumina.parser.ReadStructure$Substructure@10b6679) 0s passed
testSubstructureToReadStructure[5](picard.illumina.parser.ReadStructure$Substructure@c7da8ee, 8S8S) 0s passed
testSubstructureToReadStructure[6](picard.illumina.parser.ReadStructure$Substructure@1817f23) 0s passed
testSubstructureToReadStructure[6](picard.illumina.parser.ReadStructure$Substructure@3839717a, 8S8S) 0s passed
testSubstructureToReadStructure[7](picard.illumina.parser.ReadStructure$Substructure@5ef7b49b, 8B) 0s passed
testSubstructureToReadStructure[8](picard.illumina.parser.ReadStructure$Substructure@36cf433, 8M) 0s passed
testValidStructuresFromList[0](2T, [2T], 1, 0, 0, 0) 0s passed
testValidStructuresFromList[10](100T20T100T, [100T, 20T, 100T], 3, 0, 0, 0) 0s passed
testValidStructuresFromList[11](2S50S10S, [2S, 50S, 10S], 0, 0, 3, 0) 0s passed
testValidStructuresFromList[12](10T1B11T, [10T, 1B, 11T], 2, 1, 0, 0) 0s passed
testValidStructuresFromList[13](201T13T111B, [201T, 13T, 111B], 2, 1, 0, 0) 0s passed
testValidStructuresFromList[14](15B1T1T, [15B, 1T, 1T], 2, 1, 0, 0) 0s passed
testValidStructuresFromList[15](99B7T6B, [99B, 7T, 6B], 1, 2, 0, 0) 0.001s passed
testValidStructuresFromList[16](631B776S638T, [631B, 776S, 638T], 1, 1, 1, 0) 0s passed
testValidStructuresFromList[17](631M776S638T, [631M, 776S, 638T], 1, 0, 1, 1) 0s passed
testValidStructuresFromList[18](3T7B60S2T, [3T, 7B, 60S, 2T], 2, 1, 1, 0) 0s passed
testValidStructuresFromList[19](20B9S100T1T, [20B, 9S, 100T, 1T], 2, 1, 1, 0) 0s passed
testValidStructuresFromList[1](1234B, [1234B], 0, 1, 0, 0) 0s passed
testValidStructuresFromList[20](33T42B9T81B, [33T, 42B, 9T, 81B], 2, 2, 0, 0) 0s passed
testValidStructuresFromList[21](28B56B13T123S, [28B, 56B, 13T, 123S], 1, 2, 1, 0) 0s passed
testValidStructuresFromList[22](92S8B8B32B, [92S, 8B, 8B, 32B], 0, 3, 1, 0) 0s passed
testValidStructuresFromList[23](92S8M8M32M, [92S, 8M, 8M, 32M], 0, 0, 1, 3) 0s passed
testValidStructuresFromList[24](2S88B7T8S9T9T84B100S2S4B3B, [2S, 88B, 7T, 8S, 9T, 9T, 84B, 100S, 2S, 4B, 3B], 3, 4, 4, 0) 0s passed
testValidStructuresFromList[25](2S88B7T8S9T9T84B3M100S2S4B3M3B, [2S, 88B, 7T, 8S, 9T, 9T, 84B, 3M, 100S, 2S, 4B, 3M, 3B], 3, 4, 4, 2) 0s passed
testValidStructuresFromList[2](2147483647S, [2147483647S], 0, 0, 1, 0) 0s passed
testValidStructuresFromList[3](2147483647M, [2147483647M], 0, 0, 0, 1) 0s passed
testValidStructuresFromList[4](76T76T, [76T, 76T], 2, 0, 0, 0) 0s passed
testValidStructuresFromList[5](76T1B, [76T, 1B], 1, 1, 0, 0) 0s passed
testValidStructuresFromList[6](76B1T, [76B, 1T], 1, 1, 0, 0) 0s passed
testValidStructuresFromList[7](1S1B, [1S, 1B], 0, 1, 1, 0) 0s passed
testValidStructuresFromList[8](1S1B1M, [1S, 1B, 1M], 0, 1, 1, 1) 0s passed
testValidStructuresFromList[9](1T999S, [1T, 999S], 1, 0, 1, 0) 0s passed
testValidStructuresFromString[0](2T, [2T], 1, 0, 0, 0) 0s passed
testValidStructuresFromString[10](100T20T100T, [100T, 20T, 100T], 3, 0, 0, 0) 0s passed
testValidStructuresFromString[11](2S50S10S, [2S, 50S, 10S], 0, 0, 3, 0) 0s passed
testValidStructuresFromString[12](10T1B11T, [10T, 1B, 11T], 2, 1, 0, 0) 0s passed
testValidStructuresFromString[13](201T13T111B, [201T, 13T, 111B], 2, 1, 0, 0) 0s passed
testValidStructuresFromString[14](15B1T1T, [15B, 1T, 1T], 2, 1, 0, 0) 0s passed
testValidStructuresFromString[15](99B7T6B, [99B, 7T, 6B], 1, 2, 0, 0) 0s passed
testValidStructuresFromString[16](631B776S638T, [631B, 776S, 638T], 1, 1, 1, 0) 0s passed
testValidStructuresFromString[17](631M776S638T, [631M, 776S, 638T], 1, 0, 1, 1) 0s passed
testValidStructuresFromString[18](3T7B60S2T, [3T, 7B, 60S, 2T], 2, 1, 1, 0) 0s passed
testValidStructuresFromString[19](20B9S100T1T, [20B, 9S, 100T, 1T], 2, 1, 1, 0) 0s passed
testValidStructuresFromString[1](1234B, [1234B], 0, 1, 0, 0) 0s passed
testValidStructuresFromString[20](33T42B9T81B, [33T, 42B, 9T, 81B], 2, 2, 0, 0) 0s passed
testValidStructuresFromString[21](28B56B13T123S, [28B, 56B, 13T, 123S], 1, 2, 1, 0) 0s passed
testValidStructuresFromString[22](92S8B8B32B, [92S, 8B, 8B, 32B], 0, 3, 1, 0) 0s passed
testValidStructuresFromString[23](92S8M8M32M, [92S, 8M, 8M, 32M], 0, 0, 1, 3) 0s passed
testValidStructuresFromString[24](2S88B7T8S9T9T84B100S2S4B3B, [2S, 88B, 7T, 8S, 9T, 9T, 84B, 100S, 2S, 4B, 3B], 3, 4, 4, 0) 0s passed
testValidStructuresFromString[25](2S88B7T8S9T9T84B3M100S2S4B3M3B, [2S, 88B, 7T, 8S, 9T, 9T, 84B, 3M, 100S, 2S, 4B, 3M, 3B], 3, 4, 4, 2) 0s passed
testValidStructuresFromString[2](2147483647S, [2147483647S], 0, 0, 1, 0) 0s passed
testValidStructuresFromString[3](2147483647M, [2147483647M], 0, 0, 0, 1) 0s passed
testValidStructuresFromString[4](76T76T, [76T, 76T], 2, 0, 0, 0) 0s passed
testValidStructuresFromString[5](76T1B, [76T, 1B], 1, 1, 0, 0) 0s passed
testValidStructuresFromString[6](76B1T, [76B, 1T], 1, 1, 0, 0) 0s passed
testValidStructuresFromString[7](1S1B, [1S, 1B], 0, 1, 1, 0) 0s passed
testValidStructuresFromString[8](1S1B1M, [1S, 1B, 1M], 0, 1, 1, 1) 0.001s passed
testValidStructuresFromString[9](1T999S, [1T, 999S], 1, 0, 1, 0) 0s passed