Class picard.analysis.AdapterUtilityTest

all > picard.analysis > AdapterUtilityTest
82

tests
0

failures
0

ignored
0.014s

duration
100%

successful

Tests

Test Duration Result
testAdapterReadsRevComp[0](AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAAGAGGTTGTGGGTATGGGGGGGGGGGGGGGGGGGGTGGGGAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG, true) 0s passed
testAdapterReadsRevComp[10](agatcggaagagctcgtatgccgtcttctgcttggggggggggggtgggtcca, true) 0s passed
testAdapterReadsRevComp[11](AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCT, true) 0s passed
testAdapterReadsRevComp[12](AGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTG, true) 0s passed
testAdapterReadsRevComp[13](AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCT, true) 0s passed
testAdapterReadsRevComp[14](AGATCGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGATCTCGTATGCCGTCTTCTGCTTG, true) 0s passed
testAdapterReadsRevComp[15](AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCT, true) 0.001s passed
testAdapterReadsRevComp[16](AGATCGGAAGAGCACACGTCTGAACTCCAGTCACNNNNNNNNATCTCGTATGCCGTCTTCTGCTTG, true) 0s passed
testAdapterReadsRevComp[17](GAGGCCAAATATCATTCTGAGGGGCCACAGTAATTACAAACTTACTATCC, false) 0s passed
testAdapterReadsRevComp[18](GCCATCCCATACATTGGGACAGACCTAGTTCAATGAATCTGAGGAGGCTA, false) 0s passed
testAdapterReadsRevComp[19](CTCAGTAGACAGTCCCACCCTCACACGATTCTTTACCTTTCACTTCATCT, false) 0.001s passed
testAdapterReadsRevComp[1](GATCGGAAGAGCACACGTCTGAACTCCAGTAACGCACATCTATCTCGTATTCCGTCTTCTTCTTGAACAGGGGTGGGTGGGGGGGGGGGGTGGGGGGGGGGGGGG, true) 0s passed
testAdapterReadsRevComp[20](TACCCTTCATTATTGCAGCCCTAGCAGCACTCCACCTCCTATTCTTGCAC, false) 0s passed
testAdapterReadsRevComp[21](GAAACGGGATCAAACAACCCCCTAGGAATCACCTCCCATTCCGATAAAAT, false) 0s passed
testAdapterReadsRevComp[22](CACCTTCCACCCTTACTACACAATCAAAGACGCCCTCGGCTTACTTCTCT, false) 0.001s passed
testAdapterReadsRevComp[23](TCCTTCTCTCCTTAATGACATTAACACTATTCTCACCAGACCTCCTAGGC, false) 0s passed
testAdapterReadsRevComp[24](GACCCAGACAATTATACCCTAGCCAACCCCTTAAACACCCCTCCCCACAT, false) 0s passed
testAdapterReadsRevComp[25](CAAGCCCGAATGATATTTCCTATTCGCCTACACAATTCTCCGATCCGTCC, false) 0s passed
testAdapterReadsRevComp[26](CTAACAAACTAGGAGGCGTCCTTGCCCTATTACTATCCATCCTCATCCTA, false) 0.001s passed
testAdapterReadsRevComp[27](GCAATAATCCCCATCCTCCATATATCCAAACAACAAAGCATAATATTTCG, false) 0s passed
testAdapterReadsRevComp[28](CCCACTAAGCCAATCACTTTATTGACTCCTAGCCGCAGACCTCCTCATTC, false) 0s passed
testAdapterReadsRevComp[29](TAACCTGAATCGGAGGACAACCAGTAAGCTACCCTTTTACCATCATTGGA, false) 0s passed
testAdapterReadsRevComp[2](CTGAACTCCAGTCACGCACATCTATCGCGTATGCCGTCTTCTGCTTGAAAAGGGGGGGGGGGTGGGGGGGGGGG, true) 0s passed
testAdapterReadsRevComp[30](CAAGTAGCATCCGTACTATACTTCACAACAATCCTAATCCTAATACCAAC, false) 0s passed
testAdapterReadsRevComp[31](TATCTCCCTAATTGAAAACAAAATACTCAAATGGGCCTGTCCTTGTAGTA, false) 0s passed
testAdapterReadsRevComp[32](TAAACTAATACACCAGTCTTGTAAACCGGAGACGAAAACCTTTTTCCAAG, false) 0s passed
testAdapterReadsRevComp[33](GACAAATCAGAGAAAAAGTCTTTAACTCCACCATTAGCACCCAAAGCTAA, false) 0s passed
testAdapterReadsRevComp[34](GATTCTAATTTAAACTATTCTCTGTTCTTTCATGGGGAAGCAGATTTGGG, false) 0s passed
testAdapterReadsRevComp[35](TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC, false) 0s passed
testAdapterReadsRevComp[36](ATTACTGCCAGCCACCATGAATATTGTACGGTACCATAAATACTTGACCA, false) 0.001s passed
testAdapterReadsRevComp[37](CCTGTAGTACATAAAAACCCAACCCACATCAAACCCCCCCCCCCCATGCT, false) 0s passed
testAdapterReadsRevComp[38](TACAAGCAAGTACAGCAATCAACCTTCAACTATCACACATCAACTGCAAC, false) 0s passed
testAdapterReadsRevComp[39](TCCAAAGCCACCCCTCACCCACTAGGATACCAACAAACCTACCCACCCTT, false) 0s passed
testAdapterReadsRevComp[3](GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAAGAGGTTGTGGGGGTGAAGGGGGGGGGGGGGGG, true) 0s passed
testAdapterReadsRevComp[40](AACAGTACATAGTACATAAAGTCATTTACCGTACATAGCACATTACAGTC, false) 0s passed
testAdapterReadsRevComp[4](AGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGGGGGGGGGGGGTGGGTCCA, true) 0s passed
testAdapterReadsRevComp[5](AGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGGGGGGGGGGGGTGGGTCCA, true) 0s passed
testAdapterReadsRevComp[6](CTCGTATGCCGTCTTCTGCTTGGGGGGGGGGGGTGGGTCCA, true) 0s passed
testAdapterReadsRevComp[7](GAGCTCGTATGCCGTCTTCTGCTTGGGGGGGGGGGGTGGGTCCA, true) 0.001s passed
testAdapterReadsRevComp[8](AGATCGGAAGAGCGTCGTGTAGGGaaaGAGTGTAAGAGGTTGTGGGTATGGGGGGGGGGGGGGGGGGGGTGGGGAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG, true) 0s passed
testAdapterReadsRevComp[9](GATCggaAGAGCACACGTCTGAACTCCAGTAACGCACATCTATCTCGTATTCCGTCTTCTTCTTGAACAGGGGTGGGTGGGGGGGGGGGGTGGGGGGGGGGGGGG, true) 0s passed
testAdapterReads[0](AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAAGAGGTTGTGGGTATGGGGGGGGGGGGGGGGGGGGTGGGGAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG, true) 0s passed
testAdapterReads[10](agatcggaagagctcgtatgccgtcttctgcttggggggggggggtgggtcca, true) 0s passed
testAdapterReads[11](AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCT, true) 0s passed
testAdapterReads[12](AGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTG, true) 0.001s passed
testAdapterReads[13](AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCT, true) 0s passed
testAdapterReads[14](AGATCGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGATCTCGTATGCCGTCTTCTGCTTG, true) 0s passed
testAdapterReads[15](AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCT, true) 0.001s passed
testAdapterReads[16](AGATCGGAAGAGCACACGTCTGAACTCCAGTCACNNNNNNNNATCTCGTATGCCGTCTTCTGCTTG, true) 0s passed
testAdapterReads[17](GAGGCCAAATATCATTCTGAGGGGCCACAGTAATTACAAACTTACTATCC, false) 0.001s passed
testAdapterReads[18](GCCATCCCATACATTGGGACAGACCTAGTTCAATGAATCTGAGGAGGCTA, false) 0s passed
testAdapterReads[19](CTCAGTAGACAGTCCCACCCTCACACGATTCTTTACCTTTCACTTCATCT, false) 0s passed
testAdapterReads[1](GATCGGAAGAGCACACGTCTGAACTCCAGTAACGCACATCTATCTCGTATTCCGTCTTCTTCTTGAACAGGGGTGGGTGGGGGGGGGGGGTGGGGGGGGGGGGGG, true) 0s passed
testAdapterReads[20](TACCCTTCATTATTGCAGCCCTAGCAGCACTCCACCTCCTATTCTTGCAC, false) 0.001s passed
testAdapterReads[21](GAAACGGGATCAAACAACCCCCTAGGAATCACCTCCCATTCCGATAAAAT, false) 0s passed
testAdapterReads[22](CACCTTCCACCCTTACTACACAATCAAAGACGCCCTCGGCTTACTTCTCT, false) 0s passed
testAdapterReads[23](TCCTTCTCTCCTTAATGACATTAACACTATTCTCACCAGACCTCCTAGGC, false) 0s passed
testAdapterReads[24](GACCCAGACAATTATACCCTAGCCAACCCCTTAAACACCCCTCCCCACAT, false) 0.001s passed
testAdapterReads[25](CAAGCCCGAATGATATTTCCTATTCGCCTACACAATTCTCCGATCCGTCC, false) 0s passed
testAdapterReads[26](CTAACAAACTAGGAGGCGTCCTTGCCCTATTACTATCCATCCTCATCCTA, false) 0s passed
testAdapterReads[27](GCAATAATCCCCATCCTCCATATATCCAAACAACAAAGCATAATATTTCG, false) 0s passed
testAdapterReads[28](CCCACTAAGCCAATCACTTTATTGACTCCTAGCCGCAGACCTCCTCATTC, false) 0.001s passed
testAdapterReads[29](TAACCTGAATCGGAGGACAACCAGTAAGCTACCCTTTTACCATCATTGGA, false) 0s passed
testAdapterReads[2](CTGAACTCCAGTCACGCACATCTATCGCGTATGCCGTCTTCTGCTTGAAAAGGGGGGGGGGGTGGGGGGGGGGG, true) 0s passed
testAdapterReads[30](CAAGTAGCATCCGTACTATACTTCACAACAATCCTAATCCTAATACCAAC, false) 0s passed
testAdapterReads[31](TATCTCCCTAATTGAAAACAAAATACTCAAATGGGCCTGTCCTTGTAGTA, false) 0s passed
testAdapterReads[32](TAAACTAATACACCAGTCTTGTAAACCGGAGACGAAAACCTTTTTCCAAG, false) 0.001s passed
testAdapterReads[33](GACAAATCAGAGAAAAAGTCTTTAACTCCACCATTAGCACCCAAAGCTAA, false) 0s passed
testAdapterReads[34](GATTCTAATTTAAACTATTCTCTGTTCTTTCATGGGGAAGCAGATTTGGG, false) 0s passed
testAdapterReads[35](TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC, false) 0s passed
testAdapterReads[36](ATTACTGCCAGCCACCATGAATATTGTACGGTACCATAAATACTTGACCA, false) 0s passed
testAdapterReads[37](CCTGTAGTACATAAAAACCCAACCCACATCAAACCCCCCCCCCCCATGCT, false) 0.001s passed
testAdapterReads[38](TACAAGCAAGTACAGCAATCAACCTTCAACTATCACACATCAACTGCAAC, false) 0s passed
testAdapterReads[39](TCCAAAGCCACCCCTCACCCACTAGGATACCAACAAACCTACCCACCCTT, false) 0s passed
testAdapterReads[3](GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAAGAGGTTGTGGGGGTGAAGGGGGGGGGGGGGGG, true) 0s passed
testAdapterReads[40](AACAGTACATAGTACATAAAGTCATTTACCGTACATAGCACATTACAGTC, false) 0s passed
testAdapterReads[4](AGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGGGGGGGGGGGGTGGGTCCA, true) 0s passed
testAdapterReads[5](AGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGGGGGGGGGGGGTGGGTCCA, true) 0s passed
testAdapterReads[6](CTCGTATGCCGTCTTCTGCTTGGGGGGGGGGGGTGGGTCCA, true) 0s passed
testAdapterReads[7](GAGCTCGTATGCCGTCTTCTGCTTGGGGGGGGGGGGTGGGTCCA, true) 0s passed
testAdapterReads[8](AGATCGGAAGAGCGTCGTGTAGGGaaaGAGTGTAAGAGGTTGTGGGTATGGGGGGGGGGGGGGGGGGGGTGGGGAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG, true) 0s passed
testAdapterReads[9](GATCggaAGAGCACACGTCTGAACTCCAGTAACGCACATCTATCTCGTATTCCGTCTTCTTCTTGAACAGGGGTGGGTGGGGGGGGGGGGTGGGGGGGGGGGGGG, true) 0s passed