| Test |
Duration |
Result |
| independentTestOfDataProviderTest |
0.332s |
passed |
| testDataProviderswithDP[0](public java.lang.Object[][] picard.vcf.filter.TestFilterVcf.goodInputVcfs(), class picard.vcf.filter.TestFilterVcf) |
0.001s |
passed |
| testDataProviderswithDP[100](public java.lang.Object[][] picard.sam.SamErrorMetric.CollectSamErrorMetricsTest.readCycleBinData(), class picard.sam.SamErrorMetric.CollectSamErrorMetricsTest) |
0.001s |
passed |
| testDataProviderswithDP[101](public java.lang.Object[][] picard.sam.SamErrorMetric.CollectSamErrorMetricsTest.provideForTestHasDeletionBeenProcessed(), class picard.sam.SamErrorMetric.CollectSamErrorMetricsTest) |
0s |
passed |
| testDataProviderswithDP[102](public java.lang.Object[][] picard.sam.SamErrorMetric.CollectSamErrorMetricsTest.parseDirectiveData(), class picard.sam.SamErrorMetric.CollectSamErrorMetricsTest) |
0s |
passed |
| testDataProviderswithDP[103](public java.lang.Object[][] picard.sam.SamErrorMetric.CollectSamErrorMetricsTest.readCycleBinDataError(), class picard.sam.SamErrorMetric.CollectSamErrorMetricsTest) |
0s |
passed |
| testDataProviderswithDP[104](public java.lang.Object[][] picard.sam.SamErrorMetric.CollectSamErrorMetricsTest.OneCovariateErrorMetricsDataProvider(), class picard.sam.SamErrorMetric.CollectSamErrorMetricsTest) |
0s |
passed |
| testDataProviderswithDP[105](public java.lang.Object[][] picard.sam.DownsampleSamTest.testCloudBamDataProvider(), class picard.sam.DownsampleSamTest) |
0.001s |
passed |
| testDataProviderswithDP[106](public java.lang.Object[][] picard.sam.DownsampleSamTest.testCloudCramDataProvider(), class picard.sam.DownsampleSamTest) |
0s |
passed |
| testDataProviderswithDP[107](public java.lang.Object[][] picard.sam.DownsampleSamTest.repeatedDownsamplingProvider(), class picard.sam.DownsampleSamTest) |
0.001s |
passed |
| testDataProviderswithDP[108](public java.lang.Object[][] picard.sam.DownsampleSamTest.ValidArgumentsTestProvider(), class picard.sam.DownsampleSamTest) |
0s |
passed |
| testDataProviderswithDP[109](java.lang.Object[][] picard.sam.SetNmMdAndUqTagsTest.testValidSortData(), class picard.sam.SetNmMdAndUqTagsTest) |
0s |
passed |
| testDataProviderswithDP[10](public java.lang.Object[][] picard.pedigree.SexTest.testSexDataProviderStr(), class picard.pedigree.SexTest) |
0.001s |
passed |
| testDataProviderswithDP[110](public java.lang.Object[][] picard.sam.CreateSequenceDictionaryTest.cloudTestData(), class picard.sam.CreateSequenceDictionaryTest) |
0s |
passed |
| testDataProviderswithDP[111](public java.lang.Object[][] picard.sam.util.PrimaryAlignmentKeyTest.negativeTestData(), class picard.sam.util.PrimaryAlignmentKeyTest) |
0.001s |
passed |
| testDataProviderswithDP[112](public java.lang.Object[][] picard.sam.util.PrimaryAlignmentKeyTest.positiveTestData(), class picard.sam.util.PrimaryAlignmentKeyTest) |
0.001s |
passed |
| testDataProviderswithDP[113](public java.lang.Object[][] picard.sam.util.ReadNameParserTests.testReadNameParsingDataProvider(), class picard.sam.util.ReadNameParserTests) |
0s |
passed |
| testDataProviderswithDP[114](public java.lang.Object[][] picard.sam.util.ReadNameParserTests.testParseReadNameDataProvider(), class picard.sam.util.ReadNameParserTests) |
0s |
passed |
| testDataProviderswithDP[115](public java.lang.Object[][] picard.sam.util.SamComparisonTest.samComparisonTestData(), class picard.sam.util.SamComparisonTest) |
0s |
passed |
| testDataProviderswithDP[116](public java.lang.Object[][] picard.sam.DuplicationMetricsTest.testMergeDataProvider(), class picard.sam.DuplicationMetricsTest) |
0s |
passed |
| testDataProviderswithDP[117](public java.util.Iterator picard.sam.ReorderSamTest.testDictionaryData() throws java.io.IOException, class picard.sam.ReorderSamTest) |
0.001s |
passed |
| testDataProviderswithDP[118](public java.lang.Object[][] picard.sam.PositionBasedDownsampleSamTest.InvalidArgumentsTestProvider(), class picard.sam.PositionBasedDownsampleSamTest) |
0s |
passed |
| testDataProviderswithDP[119](public java.lang.Object[][] picard.sam.PositionBasedDownsampleSamTest.allowTwiceData(), class picard.sam.PositionBasedDownsampleSamTest) |
0s |
passed |
| testDataProviderswithDP[11](public java.lang.Object[][] picard.pedigree.SexTest.testSexDataProviderInt(), class picard.pedigree.SexTest) |
0.001s |
passed |
| testDataProviderswithDP[120](public java.lang.Object[][] picard.sam.PositionBasedDownsampleSamTest.ValidArgumentsTestProvider(), class picard.sam.PositionBasedDownsampleSamTest) |
0s |
passed |
| testDataProviderswithDP[121](public java.lang.Object[][] picard.sam.markduplicates.AbstractMarkDuplicatesCommandLineProgramTest.extensions(), class picard.sam.markduplicates.MarkDuplicatesTagRepresentativeReadIndexTest) |
0s |
passed |
| testDataProviderswithDP[122](public java.lang.Object[][] picard.sam.markduplicates.MarkDuplicatesTagRepresentativeReadIndexTest.sortOrderDataProvider(), class picard.sam.markduplicates.MarkDuplicatesTagRepresentativeReadIndexTest) |
0.001s |
passed |
| testDataProviderswithDP[123](public java.lang.Object[][] picard.sam.markduplicates.AbstractMarkDuplicatesCommandLineProgramTest.secondarySupplementaryData(), class picard.sam.markduplicates.MarkDuplicatesTagRepresentativeReadIndexTest) |
0s |
passed |
| testDataProviderswithDP[124](public java.lang.Object[][] picard.sam.markduplicates.ElcHashBasedDuplicatesFinderTest.searchDuplicatesDataProvider(), class picard.sam.markduplicates.ElcHashBasedDuplicatesFinderTest) |
0.001s |
passed |
| testDataProviderswithDP[125](public java.lang.Object[][] picard.sam.markduplicates.ElcHashBasedDuplicatesFinderTest.fillHistogramDataProvider(), class picard.sam.markduplicates.ElcHashBasedDuplicatesFinderTest) |
0s |
passed |
| testDataProviderswithDP[126](public java.lang.Object[][] picard.sam.markduplicates.AsIsMarkDuplicatesTest.testSameUnclipped5PrimeOppositeStrandData(), class picard.sam.markduplicates.AsIsMarkDuplicatesTest) |
0.001s |
passed |
| testDataProviderswithDP[127](public java.lang.Object[][] picard.sam.markduplicates.AsIsMarkDuplicatesTest.queryGroupedInput(), class picard.sam.markduplicates.AsIsMarkDuplicatesTest) |
0s |
passed |
| testDataProviderswithDP[128](public java.lang.Object[][] picard.sam.markduplicates.MarkDuplicatesForFlowHelperTest.forFlowDataProvider(), class picard.sam.markduplicates.MarkDuplicatesForFlowHelperTest) |
0.001s |
passed |
| testDataProviderswithDP[129](public java.lang.Object[][] picard.sam.markduplicates.MarkDuplicatesForFlowHelperTest.getFlowEndBaseQualitiesDataProvider(), class picard.sam.markduplicates.MarkDuplicatesForFlowHelperTest) |
0s |
passed |
| testDataProviderswithDP[12](public java.lang.Object[][] picard.pedigree.PedFileTest.testFromSexMapDataProvider(), class picard.pedigree.PedFileTest) |
0s |
passed |
| testDataProviderswithDP[130](public java.lang.Object[][] picard.sam.markduplicates.MarkDuplicatesForFlowHelperTest.getFlowSumOfBaseQualitiesDataProvider(), class picard.sam.markduplicates.MarkDuplicatesForFlowHelperTest) |
0s |
passed |
| testDataProviderswithDP[131](public java.lang.Object[][] picard.sam.markduplicates.MarkDuplicatesTest.pgRecordChainingTestDataProvider(), class picard.sam.markduplicates.MarkDuplicateWithMissingSampleBarcodeTest) |
0.001s |
passed |
| testDataProviderswithDP[132](public java.lang.Object[][] picard.sam.markduplicates.AbstractMarkDuplicatesCommandLineProgramTest.extensions(), class picard.sam.markduplicates.MarkDuplicateWithMissingSampleBarcodeTest) |
0s |
passed |
| testDataProviderswithDP[133](public java.lang.Object[][] picard.sam.markduplicates.MarkDuplicatesTest.testDuplexUmiDataProvider(), class picard.sam.markduplicates.MarkDuplicateWithMissingSampleBarcodeTest) |
0s |
passed |
| testDataProviderswithDP[134](public java.lang.Object[][] picard.sam.markduplicates.AbstractMarkDuplicatesCommandLineProgramTest.secondarySupplementaryData(), class picard.sam.markduplicates.MarkDuplicateWithMissingSampleBarcodeTest) |
0s |
passed |
| testDataProviderswithDP[135](public java.lang.Object[][] picard.sam.markduplicates.MarkDuplicatesTest.testOpticalDuplicateDetectionDataProvider(), class picard.sam.markduplicates.MarkDuplicateWithMissingSampleBarcodeTest) |
0s |
passed |
| testDataProviderswithDP[136](public java.lang.Object[][] picard.sam.markduplicates.AbstractMarkDuplicatesCommandLineProgramTest.extensions(), class picard.sam.markduplicates.SimpleMarkDuplicatesWithMateCigarTest) |
0s |
passed |
| testDataProviderswithDP[137](public java.lang.Object[][] picard.sam.markduplicates.AbstractMarkDuplicatesCommandLineProgramTest.secondarySupplementaryData(), class picard.sam.markduplicates.SimpleMarkDuplicatesWithMateCigarTest) |
0s |
passed |
| testDataProviderswithDP[138](public java.lang.Object[][] picard.sam.markduplicates.MarkDuplicatesTest.pgRecordChainingTestDataProvider(), class picard.sam.markduplicates.MarkDuplicateWithMissingReadOneBarcodeTest) |
0s |
passed |
| testDataProviderswithDP[139](public java.lang.Object[][] picard.sam.markduplicates.AbstractMarkDuplicatesCommandLineProgramTest.extensions(), class picard.sam.markduplicates.MarkDuplicateWithMissingReadOneBarcodeTest) |
0s |
passed |
| testDataProviderswithDP[13](public java.lang.Object[][] picard.fingerprint.CrosscheckFingerprintsTest.cramsWithNoReference(), class picard.fingerprint.CrosscheckFingerprintsTest) |
1.069s |
passed |
| testDataProviderswithDP[140](public java.lang.Object[][] picard.sam.markduplicates.MarkDuplicatesTest.testDuplexUmiDataProvider(), class picard.sam.markduplicates.MarkDuplicateWithMissingReadOneBarcodeTest) |
0s |
passed |
| testDataProviderswithDP[141](public java.lang.Object[][] picard.sam.markduplicates.AbstractMarkDuplicatesCommandLineProgramTest.secondarySupplementaryData(), class picard.sam.markduplicates.MarkDuplicateWithMissingReadOneBarcodeTest) |
0s |
passed |
| testDataProviderswithDP[142](public java.lang.Object[][] picard.sam.markduplicates.MarkDuplicatesTest.testOpticalDuplicateDetectionDataProvider(), class picard.sam.markduplicates.MarkDuplicateWithMissingReadOneBarcodeTest) |
0s |
passed |
| testDataProviderswithDP[143](private java.lang.Object[][] picard.sam.markduplicates.UmiUtilTest.testBrokenUmiDataProvider(), class picard.sam.markduplicates.UmiUtilTest) |
0.001s |
passed |
| testDataProviderswithDP[144](private java.lang.Object[][] picard.sam.markduplicates.UmiUtilTest.testIsTopStrandDataProvider(), class picard.sam.markduplicates.UmiUtilTest) |
0s |
passed |
| testDataProviderswithDP[145](public java.lang.Object[][] picard.sam.markduplicates.MarkDuplicatesTest.pgRecordChainingTestDataProvider(), class picard.sam.markduplicates.MarkDuplicatesTest) |
0s |
passed |
| testDataProviderswithDP[146](public java.lang.Object[][] picard.sam.markduplicates.AbstractMarkDuplicatesCommandLineProgramTest.extensions(), class picard.sam.markduplicates.MarkDuplicatesTest) |
0.001s |
passed |
| testDataProviderswithDP[147](public java.lang.Object[][] picard.sam.markduplicates.MarkDuplicatesTest.testDuplexUmiDataProvider(), class picard.sam.markduplicates.MarkDuplicatesTest) |
0s |
passed |
| testDataProviderswithDP[148](public java.lang.Object[][] picard.sam.markduplicates.AbstractMarkDuplicatesCommandLineProgramTest.secondarySupplementaryData(), class picard.sam.markduplicates.MarkDuplicatesTest) |
0s |
passed |
| testDataProviderswithDP[149](public java.lang.Object[][] picard.sam.markduplicates.MarkDuplicatesTest.testOpticalDuplicateDetectionDataProvider(), class picard.sam.markduplicates.MarkDuplicatesTest) |
0.001s |
passed |
| testDataProviderswithDP[14](public java.util.Iterator picard.fingerprint.CrosscheckFingerprintsTest.checkSamplesCrosscheckAllWithMappingData(), class picard.fingerprint.CrosscheckFingerprintsTest) |
0.531s |
passed |
| testDataProviderswithDP[150](public java.lang.Object[][] picard.sam.markduplicates.EstimateLibraryComplexityTest.createDataTestSimpleDuplicateWithMaxReadLength(), class picard.sam.markduplicates.EstimateLibraryComplexityTest) |
0s |
passed |
| testDataProviderswithDP[151](public java.lang.Object[][] picard.sam.markduplicates.EstimateLibraryComplexityTest.createDataTestMaxDiffRate(), class picard.sam.markduplicates.EstimateLibraryComplexityTest) |
0s |
passed |
| testDataProviderswithDP[152](public java.lang.Object[][] picard.sam.markduplicates.EstimateLibraryComplexityTest.createDataTestDefaultMinGroupCount(), class picard.sam.markduplicates.EstimateLibraryComplexityTest) |
0.001s |
passed |
| testDataProviderswithDP[153](public java.lang.Object[][] picard.sam.markduplicates.EstimateLibraryComplexityTest.createDataTestSimpleDuplicatesWithSecondaryAndSupplementaryRecords(), class picard.sam.markduplicates.EstimateLibraryComplexityTest) |
0s |
passed |
| testDataProviderswithDP[154](public java.lang.Object[][] picard.sam.markduplicates.EstimateLibraryComplexityTest.createDataTestSimpleDuplicate(), class picard.sam.markduplicates.EstimateLibraryComplexityTest) |
0s |
passed |
| testDataProviderswithDP[155](public java.lang.Object[][] picard.sam.markduplicates.MarkDuplicatesTest.pgRecordChainingTestDataProvider(), class picard.sam.markduplicates.MarkDuplicateWithMissingReadTwoBarcodeTest) |
0s |
passed |
| testDataProviderswithDP[156](public java.lang.Object[][] picard.sam.markduplicates.AbstractMarkDuplicatesCommandLineProgramTest.extensions(), class picard.sam.markduplicates.MarkDuplicateWithMissingReadTwoBarcodeTest) |
0s |
passed |
| testDataProviderswithDP[157](public java.lang.Object[][] picard.sam.markduplicates.MarkDuplicatesTest.testDuplexUmiDataProvider(), class picard.sam.markduplicates.MarkDuplicateWithMissingReadTwoBarcodeTest) |
0s |
passed |
| testDataProviderswithDP[158](public java.lang.Object[][] picard.sam.markduplicates.AbstractMarkDuplicatesCommandLineProgramTest.secondarySupplementaryData(), class picard.sam.markduplicates.MarkDuplicateWithMissingReadTwoBarcodeTest) |
0s |
passed |
| testDataProviderswithDP[159](public java.lang.Object[][] picard.sam.markduplicates.MarkDuplicatesTest.testOpticalDuplicateDetectionDataProvider(), class picard.sam.markduplicates.MarkDuplicateWithMissingReadTwoBarcodeTest) |
0s |
passed |
| testDataProviderswithDP[15](public java.util.Iterator picard.fingerprint.CrosscheckFingerprintsTest.checkPathsData() throws java.io.IOException, class picard.fingerprint.CrosscheckFingerprintsTest) |
0.500s |
passed |
| testDataProviderswithDP[160](public java.lang.Object[][] picard.sam.markduplicates.ElcIdenticalBasesDuplicatesFinderTest.fillHistogramDataProvider(), class picard.sam.markduplicates.ElcIdenticalBasesDuplicatesFinderTest) |
0s |
passed |
| testDataProviderswithDP[161](public java.lang.Object[][] picard.sam.markduplicates.ElcIdenticalBasesDuplicatesFinderTest.searchDuplicatesDataProvider(), class picard.sam.markduplicates.ElcIdenticalBasesDuplicatesFinderTest) |
0s |
passed |
| testDataProviderswithDP[162](public java.lang.Object[][] picard.sam.markduplicates.CheckDuplicateMarkingTest.checkDuplicateMarkingDataProvider(), class picard.sam.markduplicates.CheckDuplicateMarkingTest) |
0.001s |
passed |
| testDataProviderswithDP[163](public java.lang.Object[][] picard.sam.markduplicates.AbstractMarkDuplicatesCommandLineProgramTest.extensions(), class picard.sam.markduplicates.MarkDuplicatesSetSizeHistogramTest) |
0s |
passed |
| testDataProviderswithDP[164](public java.lang.Object[][] picard.sam.markduplicates.AbstractMarkDuplicatesCommandLineProgramTest.secondarySupplementaryData(), class picard.sam.markduplicates.MarkDuplicatesSetSizeHistogramTest) |
0s |
passed |
| testDataProviderswithDP[165](public java.lang.Object[][] picard.sam.markduplicates.AsIsMarkDuplicatesTest.testSameUnclipped5PrimeOppositeStrandData(), class picard.sam.markduplicates.AsIsCollectDuplicateMetricsTest) |
0s |
passed |
| testDataProviderswithDP[166](public java.lang.Object[][] picard.sam.markduplicates.AsIsMarkDuplicatesTest.queryGroupedInput(), class picard.sam.markduplicates.AsIsCollectDuplicateMetricsTest) |
0s |
passed |
| testDataProviderswithDP[167](private java.lang.Object[][] picard.sam.markduplicates.UmiAwareMarkDuplicatesWithMateCigarTest.testDuplexUmiDataProvider(), class picard.sam.markduplicates.UmiAwareMarkDuplicatesWithMateCigarTest) |
0s |
passed |
| testDataProviderswithDP[168](public java.lang.Object[][] picard.sam.markduplicates.AbstractMarkDuplicatesCommandLineProgramTest.extensions(), class picard.sam.markduplicates.UmiAwareMarkDuplicatesWithMateCigarTest) |
0s |
passed |
| testDataProviderswithDP[169](private java.lang.Object[][] picard.sam.markduplicates.UmiAwareMarkDuplicatesWithMateCigarTest.testUmiSetsDataProvider(), class picard.sam.markduplicates.UmiAwareMarkDuplicatesWithMateCigarTest) |
0s |
passed |
| testDataProviderswithDP[16](public java.util.Iterator picard.fingerprint.CrosscheckFingerprintsTest.checkSamplesData(), class picard.fingerprint.CrosscheckFingerprintsTest) |
0.478s |
passed |
| testDataProviderswithDP[170](private java.lang.Object[][] picard.sam.markduplicates.UmiAwareMarkDuplicatesWithMateCigarTest.testBadUmiSetsDataProvider(), class picard.sam.markduplicates.UmiAwareMarkDuplicatesWithMateCigarTest) |
0s |
passed |
| testDataProviderswithDP[171](private java.lang.Object[][] picard.sam.markduplicates.UmiAwareMarkDuplicatesWithMateCigarTest.testEmptyUmiDataProvider(), class picard.sam.markduplicates.UmiAwareMarkDuplicatesWithMateCigarTest) |
0s |
passed |
| testDataProviderswithDP[172](private java.lang.Object[][] picard.sam.markduplicates.UmiAwareMarkDuplicatesWithMateCigarTest.testMultipleLibraryUmiMetricsDataProvider(), class picard.sam.markduplicates.UmiAwareMarkDuplicatesWithMateCigarTest) |
0.001s |
passed |
| testDataProviderswithDP[173](public java.lang.Object[][] picard.sam.markduplicates.AbstractMarkDuplicatesCommandLineProgramTest.secondarySupplementaryData(), class picard.sam.markduplicates.UmiAwareMarkDuplicatesWithMateCigarTest) |
0s |
passed |
| testDataProviderswithDP[174](private java.lang.Object[][] picard.sam.markduplicates.UmiAwareMarkDuplicatesWithMateCigarTest.testUmiMetricsDataProvider(), class picard.sam.markduplicates.UmiAwareMarkDuplicatesWithMateCigarTest) |
0s |
passed |
| testDataProviderswithDP[175](public java.lang.Object[][] picard.sam.markduplicates.AbstractMarkDuplicatesCommandLineProgramTest.extensions(), class picard.sam.markduplicates.CollectDuplicateMetricsTest) |
0.001s |
passed |
| testDataProviderswithDP[176](public java.lang.Object[][] picard.sam.markduplicates.AbstractMarkDuplicatesCommandLineProgramTest.secondarySupplementaryData(), class picard.sam.markduplicates.CollectDuplicateMetricsTest) |
0s |
passed |
| testDataProviderswithDP[177](public java.lang.Object[][] picard.sam.markduplicates.AbstractMarkDuplicatesCommandLineProgramTest.extensions(), class picard.sam.markduplicates.MarkDuplicatesWithMateCigarTest) |
0s |
passed |
| testDataProviderswithDP[178](public java.lang.Object[][] picard.sam.markduplicates.AbstractMarkDuplicatesCommandLineProgramTest.secondarySupplementaryData(), class picard.sam.markduplicates.MarkDuplicatesWithMateCigarTest) |
0s |
passed |
| testDataProviderswithDP[179](public java.lang.Object[][] picard.sam.markduplicates.MarkDuplicatesTest.pgRecordChainingTestDataProvider(), class picard.sam.markduplicates.MarkDuplicatesTestQueryNameSorted) |
0s |
passed |
| testDataProviderswithDP[17](public java.util.Iterator picard.fingerprint.CrosscheckFingerprintsTest.checkFilesData(), class picard.fingerprint.CrosscheckFingerprintsTest) |
0.470s |
passed |
| testDataProviderswithDP[180](public java.lang.Object[][] picard.sam.markduplicates.AbstractMarkDuplicatesCommandLineProgramTest.extensions(), class picard.sam.markduplicates.MarkDuplicatesTestQueryNameSorted) |
0s |
passed |
| testDataProviderswithDP[181](public java.lang.Object[][] picard.sam.markduplicates.MarkDuplicatesTest.testDuplexUmiDataProvider(), class picard.sam.markduplicates.MarkDuplicatesTestQueryNameSorted) |
0s |
passed |
| testDataProviderswithDP[182](public java.lang.Object[][] picard.sam.markduplicates.AbstractMarkDuplicatesCommandLineProgramTest.secondarySupplementaryData(), class picard.sam.markduplicates.MarkDuplicatesTestQueryNameSorted) |
0s |
passed |
| testDataProviderswithDP[183](public java.lang.Object[][] picard.sam.markduplicates.MarkDuplicatesTest.testOpticalDuplicateDetectionDataProvider(), class picard.sam.markduplicates.MarkDuplicatesTestQueryNameSorted) |
0s |
passed |
| testDataProviderswithDP[184](public java.lang.Object[][] picard.sam.CompareSAMsTest.compareSamsMQConcordanceTestData(), class picard.sam.CompareSAMsTest) |
0.001s |
passed |
| testDataProviderswithDP[185](public java.lang.Object[][] picard.sam.CompareSAMsTest.compareSamsTestData(), class picard.sam.CompareSAMsTest) |
0s |
passed |
| testDataProviderswithDP[186](public java.lang.Object[][] picard.sam.MergeBamAlignmentTest.testFragmentMultiHitWithFilteringTestCases(), class picard.sam.MergeBamAlignmentTest) |
0.001s |
passed |
| testDataProviderswithDP[187](java.lang.Object[][] picard.sam.MergeBamAlignmentTest.mappedReadInUnmappedBamDataProvider(), class picard.sam.MergeBamAlignmentTest) |
0s |
passed |
| testDataProviderswithDP[188](public java.lang.Object[][] picard.sam.MergeBamAlignmentTest.getDataForMergingTest(), class picard.sam.MergeBamAlignmentTest) |
0s |
passed |
| testDataProviderswithDP[189](public java.lang.Object[][] picard.sam.MergeBamAlignmentTest.getDataForSortingTest(), class picard.sam.MergeBamAlignmentTest) |
0.001s |
passed |
| testDataProviderswithDP[18](public java.util.Iterator picard.fingerprint.CrosscheckFingerprintsTest.missingIndexForced(), class picard.fingerprint.CrosscheckFingerprintsTest) |
0.463s |
passed |
| testDataProviderswithDP[190](public java.lang.Object[][] picard.sam.MergeBamAlignmentTest.testPairedMultiHitWithFilteringTestCases(), class picard.sam.MergeBamAlignmentTest) |
0s |
passed |
| testDataProviderswithDP[191](java.lang.Object[][] picard.sam.MergeBamAlignmentTest.brokenAlignedFiles(), class picard.sam.MergeBamAlignmentTest) |
0s |
passed |
| testDataProviderswithDP[192](public java.lang.Object[][] picard.sam.MergeBamAlignmentTest.UnmappedReadStrategiesProvider(), class picard.sam.MergeBamAlignmentTest) |
0s |
passed |
| testDataProviderswithDP[193](public java.lang.Object[][] picard.sam.MergeBamAlignmentTest.testShortFragmentWithIndelsClipping(), class picard.sam.MergeBamAlignmentTest) |
0s |
passed |
| testDataProviderswithDP[194](public java.lang.Object[][] picard.sam.MergeBamAlignmentTest.testEarliestFragmentStrategyDataProvider(), class picard.sam.MergeBamAlignmentTest) |
0s |
passed |
| testDataProviderswithDP[195](public java.lang.Object[][] picard.sam.MergeBamAlignmentTest.testBestFragmentMapqStrategyDataProvider(), class picard.sam.MergeBamAlignmentTest) |
0s |
passed |
| testDataProviderswithDP[196](public java.lang.Object[][] picard.sam.MergeBamAlignmentTest.testMostDistantStrategyDataProvider(), class picard.sam.MergeBamAlignmentTest) |
0s |
passed |
| testDataProviderswithDP[197](public java.lang.Object[][] picard.sam.RevertSamTest.getPostitiveTestData(), class picard.sam.RevertSamTest) |
0s |
passed |
| testDataProviderswithDP[198](public java.lang.Object[][] picard.sam.RevertSamTest.getCloudTestData(), class picard.sam.RevertSamTest) |
0.007s |
passed |
| testDataProviderswithDP[199](public java.lang.Object[][] picard.sam.RevertSamTest.getNegativeTestData(), class picard.sam.RevertSamTest) |
0s |
passed |
| testDataProviderswithDP[19](public java.lang.Object[][] picard.fingerprint.CrosscheckFingerprintsTest.bamFilesSMs(), class picard.fingerprint.CrosscheckFingerprintsTest) |
0.457s |
passed |
| testDataProviderswithDP[1](public java.lang.Object[][] picard.vcf.FixVcfHeaderTest.testFixVcfHeaderDataProvider(), class picard.vcf.FixVcfHeaderTest) |
0s |
passed |
| testDataProviderswithDP[200](public java.lang.Object[][] picard.sam.ValidateSamFileTest.indexFiles(), class picard.sam.ValidateSamFileTest) |
0s |
passed |
| testDataProviderswithDP[201](public java.lang.Object[][] picard.sam.ValidateSamFileTest.samFiles(), class picard.sam.ValidateSamFileTest) |
0s |
passed |
| testDataProviderswithDP[202](public java.lang.Object[][] picard.sam.CleanSamTest.testCleanSamDataProvider(), class picard.sam.CleanSamTest) |
0s |
passed |
| testDataProviderswithDP[203](public java.lang.Object[][] picard.sam.CleanSamTest.testCleanSamTesterDataProvider(), class picard.sam.CleanSamTest) |
0s |
passed |
| testDataProviderswithDP[204](public java.lang.Object[][] picard.sam.CramCompatibilityTest.getArgsForCRAMWithReference(), class picard.sam.CramCompatibilityTest) |
0s |
passed |
| testDataProviderswithDP[205](public java.lang.Object[][] picard.sam.CramCompatibilityTest.getArgsForCRAMWithoutReferenceToFail(), class picard.sam.CramCompatibilityTest) |
0.001s |
passed |
| testDataProviderswithDP[206](public java.lang.Object[][] picard.sam.CramCompatibilityTest.getArgsWithUnmappedCRAM(), class picard.sam.CramCompatibilityTest) |
0s |
passed |
| testDataProviderswithDP[207](public java.util.Iterator picard.illumina.DistanceMetricTest.distanceTestData(), class picard.illumina.DistanceMetricTest) |
0.001s |
passed |
| testDataProviderswithDP[208](public java.lang.Object[][] picard.illumina.parser.readers.LocsFileReaderTest.invalidFiles(), class picard.illumina.parser.readers.LocsFileReaderTest) |
0s |
passed |
| testDataProviderswithDP[209](public java.lang.Object[][] picard.illumina.parser.readers.ClocsFileReaderTest.multiBinPassingClocsFiles(), class picard.illumina.parser.readers.ClocsFileReaderTest) |
0s |
passed |
| testDataProviderswithDP[20](public java.util.Iterator picard.fingerprint.CrosscheckFingerprintsTest.checkSampleMapFailuresData(), class picard.fingerprint.CrosscheckFingerprintsTest) |
0.451s |
passed |
| testDataProviderswithDP[210](public java.lang.Object[][] picard.illumina.parser.readers.AbstractIlluminaPositionFileReaderTest.invalidPositions(), class picard.illumina.parser.readers.AbstractIlluminaPositionFileReaderTest) |
0.001s |
passed |
| testDataProviderswithDP[211](public java.lang.Object[][] picard.illumina.parser.readers.AbstractIlluminaPositionFileReaderTest.invalidFileNames(), class picard.illumina.parser.readers.AbstractIlluminaPositionFileReaderTest) |
0s |
passed |
| testDataProviderswithDP[212](public java.lang.Object[][] picard.illumina.parser.readers.BclReaderTest.failingFiles(), class picard.illumina.parser.readers.BclReaderTest) |
0s |
passed |
| testDataProviderswithDP[213](public java.lang.Object[][] picard.illumina.parser.readers.PosFileReaderTest.invalidDataFiles(), class picard.illumina.parser.readers.PosFileReaderTest) |
0s |
passed |
| testDataProviderswithDP[214](public java.lang.Object[][] picard.illumina.parser.readers.FilterFileReaderTest.failingFilesForPicardException(), class picard.illumina.parser.readers.FilterFileReaderTest) |
0.001s |
passed |
| testDataProviderswithDP[215](public java.lang.Object[][] picard.illumina.parser.readers.FilterFileReaderTest.failingFilesForSAMException(), class picard.illumina.parser.readers.FilterFileReaderTest) |
0s |
passed |
| testDataProviderswithDP[216](public java.lang.Object[][] picard.illumina.parser.readers.MMapBackedIteratorFactoryTest.validTestDefs(), class picard.illumina.parser.readers.MMapBackedIteratorFactoryTest) |
0.002s |
passed |
| testDataProviderswithDP[217](public java.lang.Object[][] picard.illumina.parser.readers.MMapBackedIteratorFactoryTest.invalidFileSizes(), class picard.illumina.parser.readers.MMapBackedIteratorFactoryTest) |
0s |
passed |
| testDataProviderswithDP[218](public java.lang.Object[][] picard.illumina.parser.IlluminaFileUtilTest.invalidLanes(), class picard.illumina.parser.IlluminaFileUtilTest) |
0s |
passed |
| testDataProviderswithDP[219](public java.lang.Object[][] picard.illumina.parser.IlluminaFileUtilTest.perTileFileUtils(), class picard.illumina.parser.IlluminaFileUtilTest) |
0s |
passed |
| testDataProviderswithDP[21](public java.lang.Object[][] picard.fingerprint.CrosscheckFingerprintsTest.bamFilesIndividuals(), class picard.fingerprint.CrosscheckFingerprintsTest) |
0.445s |
passed |
| testDataProviderswithDP[220](public java.lang.Object[][] picard.illumina.parser.IlluminaFileUtilTest.testHasCbclsDataProvider(), class picard.illumina.parser.IlluminaFileUtilTest) |
0s |
passed |
| testDataProviderswithDP[221](public java.lang.Object[][] picard.illumina.parser.IlluminaFileUtilTest.perTilePerCycleFileFormats(), class picard.illumina.parser.IlluminaFileUtilTest) |
0.001s |
passed |
| testDataProviderswithDP[222](public java.lang.Object[][] picard.illumina.parser.IlluminaFileUtilTest.missingCycleDataRanges(), class picard.illumina.parser.IlluminaFileUtilTest) |
0s |
passed |
| testDataProviderswithDP[223](public java.lang.Object[][] picard.illumina.parser.IlluminaFileUtilTest.validLanes(), class picard.illumina.parser.IlluminaFileUtilTest) |
0s |
passed |
| testDataProviderswithDP[224](public java.lang.Object[][] picard.illumina.parser.IlluminaFileUtilTest.missingTileFormats(), class picard.illumina.parser.IlluminaFileUtilTest) |
0.001s |
passed |
| testDataProviderswithDP[225](public java.lang.Object[][] picard.illumina.parser.IlluminaFileUtilTest.validLanesInvalidRegexes(), class picard.illumina.parser.IlluminaFileUtilTest) |
0s |
passed |
| testDataProviderswithDP[226](public java.lang.Object[][] picard.illumina.parser.PosParserTest.singleTileData(), class picard.illumina.parser.PosParserTest) |
0s |
passed |
| testDataProviderswithDP[227](public java.lang.Object[][] picard.illumina.parser.PosParserTest.multiTileData(), class picard.illumina.parser.PosParserTest) |
0s |
passed |
| testDataProviderswithDP[228](public java.lang.Object[][] picard.illumina.parser.IlluminaDataProviderTest.binaryData(), class picard.illumina.parser.IlluminaDataProviderTest) |
0s |
passed |
| testDataProviderswithDP[229](public java.lang.Object[][] picard.illumina.parser.IlluminaDataProviderTest.badData(), class picard.illumina.parser.IlluminaDataProviderTest) |
0s |
passed |
| testDataProviderswithDP[22](public java.util.Iterator picard.fingerprint.CrosscheckFingerprintsTest.checkSamplesCrosscheckAllData(), class picard.fingerprint.CrosscheckFingerprintsTest) |
0.447s |
passed |
| testDataProviderswithDP[230](public java.lang.Object[][] picard.illumina.parser.PerTilePerCycleParserTest.seekingTests(), class picard.illumina.parser.PerTilePerCycleParserTest) |
0s |
passed |
| testDataProviderswithDP[231](public java.lang.Object[][] picard.illumina.parser.TileMetricsUtilTest.testCases(), class picard.illumina.parser.TileMetricsUtilTest) |
0.001s |
passed |
| testDataProviderswithDP[232](public java.lang.Object[][] picard.illumina.parser.BclParserTest.getTileMaps(), class picard.illumina.parser.BclParserTest) |
0s |
passed |
| testDataProviderswithDP[233](public java.lang.Object[][] picard.illumina.parser.BclParserTest.eamssTestDat(), class picard.illumina.parser.BclParserTest) |
0s |
passed |
| testDataProviderswithDP[234](public java.lang.Object[][] picard.illumina.parser.BclParserTest.eamssDataNo10GSeries(), class picard.illumina.parser.BclParserTest) |
0.001s |
passed |
| testDataProviderswithDP[235](public java.lang.Object[][] picard.illumina.parser.BclParserTest.getMultiTileMaps(), class picard.illumina.parser.BclParserTest) |
0s |
passed |
| testDataProviderswithDP[236](public java.lang.Object[][] picard.illumina.parser.PerTileParserTest.seekingTests(), class picard.illumina.parser.PerTileParserTest) |
0s |
passed |
| testDataProviderswithDP[237](public java.lang.Object[][] picard.illumina.parser.PerTileParserTest.missingTiles(), class picard.illumina.parser.PerTileParserTest) |
0s |
passed |
| testDataProviderswithDP[238](public java.lang.Object[][] picard.illumina.parser.CycleIlluminaFileMapTest.iteratorTestData(), class picard.illumina.parser.CycleIlluminaFileMapTest) |
0.001s |
passed |
| testDataProviderswithDP[239](public java.lang.Object[][] picard.illumina.parser.FilterParserTest.failingVerifyTiles(), class picard.illumina.parser.FilterParserTest) |
0s |
passed |
| testDataProviderswithDP[23](public java.lang.Object[][] picard.fingerprint.CrosscheckFingerprintsTest.bamFilesLBs(), class picard.fingerprint.CrosscheckFingerprintsTest) |
0.433s |
passed |
| testDataProviderswithDP[240](public java.lang.Object[][] picard.illumina.parser.FilterParserTest.seekToTile(), class picard.illumina.parser.FilterParserTest) |
0s |
passed |
| testDataProviderswithDP[241](public java.lang.Object[][] picard.illumina.parser.FilterParserTest.passingTiles(), class picard.illumina.parser.FilterParserTest) |
0s |
passed |
| testDataProviderswithDP[242](public java.lang.Object[][] picard.illumina.ExtractIlluminaBarcodesTest.getQualityTestData(), class picard.illumina.ExtractIlluminaBarcodesTest) |
0s |
passed |
| testDataProviderswithDP[243](java.lang.Object[][] picard.illumina.ExtractIlluminaBarcodesTest.testDeltaData(), class picard.illumina.ExtractIlluminaBarcodesTest) |
0s |
passed |
| testDataProviderswithDP[244](public java.lang.Object[][] picard.illumina.IlluminaLaneMetricsCollectorTest.testLaneMetricsDataProvider(), class picard.illumina.IlluminaLaneMetricsCollectorTest) |
0s |
passed |
| testDataProviderswithDP[245](public java.lang.Object[][] picard.illumina.IlluminaLaneMetricsCollectorTest.testCollectIlluminaLaneMetricsDataProvider(), class picard.illumina.IlluminaLaneMetricsCollectorTest) |
0.001s |
passed |
| testDataProviderswithDP[246](public java.lang.Object[][] picard.illumina.ReadStructureTest.substructureToReadStructureData(), class picard.illumina.ReadStructureTest) |
0s |
passed |
| testDataProviderswithDP[247](public java.lang.Object[][] picard.illumina.ReadStructureTest.invalidReadStructuresFromList(), class picard.illumina.ReadStructureTest) |
0.001s |
passed |
| testDataProviderswithDP[248](public java.lang.Object[][] picard.illumina.ReadStructureTest.substructureToReadStructureNegativeData(), class picard.illumina.ReadStructureTest) |
0s |
passed |
| testDataProviderswithDP[249](public java.lang.Object[][] picard.illumina.ReadStructureTest.validReadStructures(), class picard.illumina.ReadStructureTest) |
0s |
passed |
| testDataProviderswithDP[24](public java.util.Iterator picard.fingerprint.CrosscheckFingerprintsTest.cramBamComparisonWithHapMap(), class picard.fingerprint.CrosscheckFingerprintsTest) |
0.444s |
passed |
| testDataProviderswithDP[250](public java.lang.Object[][] picard.illumina.ReadStructureTest.invalidReadStructures(), class picard.illumina.ReadStructureTest) |
0.001s |
passed |
| testDataProviderswithDP[251](private java.lang.Object[][] picard.illumina.IlluminaBasecallsToSamAdapterClippingTest.getIlluminaBasecallsToSamTestData(), class picard.illumina.IlluminaBasecallsToSamAdapterClippingTest) |
0s |
passed |
| testDataProviderswithDP[252](public java.lang.Object[][] picard.illumina.IlluminaBasecallsToSamTest.variousConfigurationsData(), class picard.illumina.IlluminaBasecallsToSamTest) |
0s |
passed |
| testDataProviderswithDP[253](public java.lang.Object[][] picard.illumina.IlluminaBasecallsToSamTest.molecularBarcodeData(), class picard.illumina.IlluminaBasecallsToSamTest) |
0s |
passed |
| testDataProviderswithDP[254](public java.lang.Object[][] picard.illumina.IlluminaBasecallsToSamTest.multiplexedData(), class picard.illumina.IlluminaBasecallsToSamTest) |
0s |
passed |
| testDataProviderswithDP[255](public java.lang.Object[][] picard.illumina.CheckIlluminaDirectoryTest.positiveTestData(), class picard.illumina.CheckIlluminaDirectoryTest) |
0s |
passed |
| testDataProviderswithDP[256](public java.lang.Object[][] picard.illumina.CheckIlluminaDirectoryTest.negativeTestData(), class picard.illumina.CheckIlluminaDirectoryTest) |
0s |
passed |
| testDataProviderswithDP[257](public java.lang.Object[][] picard.illumina.CollectIlluminaBasecallingMetricsTest.testIndexedRunLane1DataProvider(), class picard.illumina.CollectIlluminaBasecallingMetricsTest) |
0s |
passed |
| testDataProviderswithDP[258](java.lang.Object[][] picard.analysis.CollectMultipleMetricsTest.extraArgumentValue(), class picard.analysis.CollectMultipleMetricsTest) |
0s |
passed |
| testDataProviderswithDP[259](public java.util.Iterator picard.analysis.artifacts.TransitionTest.allTransitions(), class picard.analysis.artifacts.TransitionTest) |
0.001s |
passed |
| testDataProviderswithDP[25](public java.lang.Object[][] picard.fingerprint.CrosscheckFingerprintsTest.bamFilesSources(), class picard.fingerprint.CrosscheckFingerprintsTest) |
0.452s |
passed |
| testDataProviderswithDP[260](public java.lang.Object[][] picard.analysis.artifacts.TransitionTest.badBases(), class picard.analysis.artifacts.TransitionTest) |
0s |
passed |
| testDataProviderswithDP[261](public java.lang.Object[][] picard.analysis.artifacts.ConvertSequencingArtifactToOxoGTest.testEquivalenceProvider(), class picard.analysis.artifacts.ConvertSequencingArtifactToOxoGTest) |
0s |
passed |
| testDataProviderswithDP[262](public java.lang.Object[][] picard.analysis.TheoreticalSensitivityTest.trimDistributions(), class picard.analysis.TheoreticalSensitivityTest) |
0s |
passed |
| testDataProviderswithDP[263](public java.lang.Object[][] picard.analysis.TheoreticalSensitivityTest.fractionalAlleleSensDataProvider(), class picard.analysis.TheoreticalSensitivityTest) |
0s |
passed |
| testDataProviderswithDP[264](public java.lang.Object[][] picard.analysis.TheoreticalSensitivityTest.arbFracSensDataProvider(), class picard.analysis.TheoreticalSensitivityTest) |
0s |
passed |
| testDataProviderswithDP[265](public java.lang.Object[][] picard.analysis.TheoreticalSensitivityTest.equivalenceHetVsFull(), class picard.analysis.TheoreticalSensitivityTest) |
0.001s |
passed |
| testDataProviderswithDP[266](public java.lang.Object[][] picard.analysis.TheoreticalSensitivityTest.sumOfGaussians(), class picard.analysis.TheoreticalSensitivityTest) |
0s |
passed |
| testDataProviderswithDP[267](public java.lang.Object[][] picard.analysis.TheoreticalSensitivityTest.callingThreshold(), class picard.analysis.TheoreticalSensitivityTest) |
0s |
passed |
| testDataProviderswithDP[268](public java.lang.Object[][] picard.analysis.TheoreticalSensitivityTest.hetSensDataProvider(), class picard.analysis.TheoreticalSensitivityTest) |
0s |
passed |
| testDataProviderswithDP[269](public java.lang.Object[][] picard.analysis.CollectWgsMetricsTest.wgsDataProvider(), class picard.analysis.CollectWgsMetricsTest) |
0s |
passed |
| testDataProviderswithDP[26](public java.util.Iterator picard.fingerprint.CrosscheckFingerprintsTest.explicitIndexPathsInputs(), class picard.fingerprint.CrosscheckFingerprintsTest) |
0.446s |
passed |
| testDataProviderswithDP[270](public java.lang.Object[][] picard.analysis.CollectWgsMetricsTest.wgsAlgorithm(), class picard.analysis.CollectWgsMetricsTest) |
0s |
passed |
| testDataProviderswithDP[271](public java.lang.Object[][] picard.analysis.WgsMetricsTest.testWgsMetricsMergeDataProvider(), class picard.analysis.WgsMetricsTest) |
0.149s |
passed |
| testDataProviderswithDP[272](public java.lang.Object[][] picard.analysis.directed.CollectTargetedMetricsTest.theoreticalSensitivityDataProvider(), class picard.analysis.directed.CollectTargetedMetricsTest) |
0.001s |
passed |
| testDataProviderswithDP[273](public java.lang.Object[][] picard.analysis.directed.CollectTargetedMetricsTest.targetedIntervalDataProvider(), class picard.analysis.directed.CollectTargetedMetricsTest) |
0s |
passed |
| testDataProviderswithDP[274](public java.lang.Object[][] picard.analysis.directed.CollectHsMetricsTest.targetedIntervalDataProvider(), class picard.analysis.directed.CollectHsMetricsTest) |
0s |
passed |
| testDataProviderswithDP[275](public java.lang.Object[][] picard.analysis.CompareMetricsTest.testCompareMetricValuesDataProvider(), class picard.analysis.CompareMetricsTest) |
0.001s |
passed |
| testDataProviderswithDP[276](public java.lang.Object[][] picard.analysis.CompareMetricsTest.testCompareMetricsDataProvider(), class picard.analysis.CompareMetricsTest) |
0s |
passed |
| testDataProviderswithDP[277](java.lang.Object[][] picard.analysis.CollectAlignmentSummaryMetricsTest.TrueFalse(), class picard.analysis.CollectAlignmentSummaryMetricsTest) |
0s |
passed |
| testDataProviderswithDP[278](java.lang.Object[][] picard.analysis.CollectAlignmentSummaryMetricsTest.fileForTestReadLengthHistogram(), class picard.analysis.CollectAlignmentSummaryMetricsTest) |
0s |
passed |
| testDataProviderswithDP[279](public static java.lang.Object[][] picard.analysis.CollectRnaSeqMetricsTest.endBiasValues(), class picard.analysis.CollectRnaSeqMetricsTest) |
0s |
passed |
| testDataProviderswithDP[27](public java.lang.Object[][] picard.fingerprint.CrosscheckFingerprintsTest.missingOrNoFingerprintingSitesData(), class picard.fingerprint.CrosscheckFingerprintsTest) |
0.445s |
passed |
| testDataProviderswithDP[280](public static java.lang.Object[][] picard.analysis.CollectRnaSeqMetricsTest.rRnaIntervalsFiles() throws java.io.IOException, class picard.analysis.CollectRnaSeqMetricsTest) |
0s |
passed |
| testDataProviderswithDP[281](java.lang.Object[][] picard.analysis.AdapterUtilityTest.testAdapterReadsData(), class picard.analysis.AdapterUtilityTest) |
0s |
passed |
| testDataProviderswithDP[282](public java.lang.Object[][] picard.analysis.AlignmentSummaryMetricsCollectorTest.get3PrimeSoftClipData(), class picard.analysis.AlignmentSummaryMetricsCollectorTest) |
0.001s |
passed |
| testDataProviderswithDP[283](public java.util.Iterator picard.analysis.replicates.CollectIndependentReplicatesMetricTest.simpleTestsData(), class picard.analysis.replicates.CollectIndependentReplicatesMetricTest) |
0s |
passed |
| testDataProviderswithDP[284](public static java.lang.Object[][] picard.analysis.CollectOxoGMetricsTest.rightOptions(), class picard.analysis.CollectOxoGMetricsTest) |
0s |
passed |
| testDataProviderswithDP[285](public static java.lang.Object[][] picard.analysis.CollectOxoGMetricsTest.wrongOptions(), class picard.analysis.CollectOxoGMetricsTest) |
0s |
passed |
| testDataProviderswithDP[286](public java.lang.Object[][] picard.analysis.MultiLevelCollectorTest.variedAccumulationLevels(), class picard.analysis.MultiLevelCollectorTest) |
0s |
passed |
| testDataProviderswithDP[287](public java.lang.Object[][] picard.arrays.GtcToVcfTest.badData(), class picard.arrays.GtcToVcfTest) |
0s |
passed |
| testDataProviderswithDP[288](public java.lang.Object[][] picard.arrays.CollectArraysVariantCallingMetricsTest.testCollectArraysVariantCallingMetricsTestProvider(), class picard.arrays.CollectArraysVariantCallingMetricsTest) |
0s |
passed |
| testDataProviderswithDP[289](public java.lang.Object[][] picard.arrays.CollectArraysVariantCallingMetricsTest.testSexConcordanceTypesProvider(), class picard.arrays.CollectArraysVariantCallingMetricsTest) |
0s |
passed |
| testDataProviderswithDP[28](public java.util.Iterator picard.fingerprint.CrosscheckFingerprintsTest.bamFilesRGsAndHapMaps(), class picard.fingerprint.CrosscheckFingerprintsTest) |
0.448s |
passed |
| testDataProviderswithDP[290](public java.lang.Object[][] picard.arrays.illumina.Build37ExtendedIlluminaManifestRecordCreatorTest.illuminaLeftShiftDataProvider(), class picard.arrays.illumina.Build37ExtendedIlluminaManifestRecordCreatorTest) |
0s |
passed |
| testDataProviderswithDP[291](public java.lang.Object[][] picard.arrays.illumina.Build37ExtendedIlluminaManifestRecordCreatorTest.illuminaIndelDataProvider(), class picard.arrays.illumina.Build37ExtendedIlluminaManifestRecordCreatorTest) |
0.001s |
passed |
| testDataProviderswithDP[292](public java.lang.Object[][] picard.arrays.illumina.Build37ExtendedIlluminaManifestRecordCreatorTest.commonPrefixAndSuffixLengthDataProvider(), class picard.arrays.illumina.Build37ExtendedIlluminaManifestRecordCreatorTest) |
0s |
passed |
| testDataProviderswithDP[293](public java.lang.Object[][] picard.arrays.illumina.VcfToAdpcTest.vcfToAdpcBinCombinations(), class picard.arrays.illumina.VcfToAdpcTest) |
0s |
passed |
| testDataProviderswithDP[294](public java.lang.Object[][] picard.arrays.illumina.Build37ExtendedIlluminaManifestTest.testBuild37ExtendedIlluminaManifestDataProvider(), class picard.arrays.illumina.Build37ExtendedIlluminaManifestTest) |
0s |
passed |
| testDataProviderswithDP[295](public java.lang.Object[][] picard.arrays.illumina.InfiniumDataFileTest.byteArrayToIntDataProvider(), class picard.arrays.illumina.InfiniumDataFileTest) |
0s |
passed |
| testDataProviderswithDP[296](public java.lang.Object[][] picard.arrays.illumina.InfiniumDataFileTest.byteArrayToFloatDataProvider(), class picard.arrays.illumina.InfiniumDataFileTest) |
0.001s |
passed |
| testDataProviderswithDP[297](public java.lang.Object[][] picard.util.SequenceDictionaryUtilsTest.sequenceDictionaryNegativeProvider(), class picard.util.SequenceDictionaryUtilsTest) |
0s |
passed |
| testDataProviderswithDP[298](public java.lang.Object[][] picard.util.MathUtilTest.divideMethodTestCases(), class picard.util.MathUtilTest) |
0s |
passed |
| testDataProviderswithDP[299](public java.lang.Object[][] picard.util.MathUtilTest.testMinWithArrayData(), class picard.util.MathUtilTest) |
0s |
passed |
| testDataProviderswithDP[29](public java.lang.Object[][] picard.fingerprint.HaplotypeProbabilitiesTest.dataTestpEvidenceGivenPriorFromGLs(), class picard.fingerprint.HaplotypeProbabilitiesTest) |
0.001s |
passed |
| testDataProviderswithDP[2](public java.lang.Object[][] picard.vcf.VcfToIntervalListTest.getVcfToIntervalListData(), class picard.vcf.VcfToIntervalListTest) |
0s |
passed |
| testDataProviderswithDP[300](public java.lang.Object[][] picard.util.MathUtilTest.getProbabilityFromLogTestData(), class picard.util.MathUtilTest) |
0s |
passed |
| testDataProviderswithDP[301](public java.lang.Object[][] picard.util.MathUtilTest.divideMethodFailTestCases(), class picard.util.MathUtilTest) |
0.001s |
passed |
| testDataProviderswithDP[302](public java.lang.Object[][] picard.util.MathUtilTest.testSubtractMaxData(), class picard.util.MathUtilTest) |
0s |
passed |
| testDataProviderswithDP[303](public java.lang.Object[][] picard.util.MathUtilTest.testMaxWithArrayData(), class picard.util.MathUtilTest) |
0s |
passed |
| testDataProviderswithDP[304](public java.lang.Object[][] picard.util.MathUtilTest.testMinWithArrayShortData(), class picard.util.MathUtilTest) |
0s |
passed |
| testDataProviderswithDP[305](public java.lang.Object[][] picard.util.MathUtilTest.divideDoubleTestCases(), class picard.util.MathUtilTest) |
0s |
passed |
| testDataProviderswithDP[306](public java.lang.Object[][] picard.util.MathUtilTest.testMinWithArrayByteData(), class picard.util.MathUtilTest) |
0s |
passed |
| testDataProviderswithDP[307](public java.lang.Object[][] picard.util.MathUtilTest.testMinWithArrayIntData(), class picard.util.MathUtilTest) |
0s |
passed |
| testDataProviderswithDP[308](public java.lang.Object[][] picard.util.MathUtilTest.testMinWithArrayAndScalarData(), class picard.util.MathUtilTest) |
0s |
passed |
| testDataProviderswithDP[309](public java.lang.Object[][] picard.util.MathUtilTest.seqMethodTestCases(), class picard.util.MathUtilTest) |
0s |
passed |
| testDataProviderswithDP[30](public java.lang.Object[][] picard.fingerprint.HaplotypeProbabilitiesTest.symmetricLODdata(), class picard.fingerprint.HaplotypeProbabilitiesTest) |
0s |
passed |
| testDataProviderswithDP[310](public java.lang.Object[][] picard.util.MathUtilTest.testMaxWithArrayAndScalarData(), class picard.util.MathUtilTest) |
0s |
passed |
| testDataProviderswithDP[311](public java.lang.Object[][] picard.util.MathUtilTest.pNormalizeLogProbabilityTestData(), class picard.util.MathUtilTest) |
0s |
passed |
| testDataProviderswithDP[312](java.lang.Object[][] picard.util.IntervalListToBedTest.testConvertILToBedData(), class picard.util.IntervalListToBedTest) |
0s |
passed |
| testDataProviderswithDP[313](public static java.util.Iterator picard.util.IntervalListScattererTest.testScatterTestcases(), class picard.util.IntervalListScattererTest) |
0.025s |
passed |
| testDataProviderswithDP[314](public java.lang.Object[][] picard.util.BedToIntervalListTest.testBedToIntervalListDataProvider(), class picard.util.BedToIntervalListTest) |
0s |
passed |
| testDataProviderswithDP[315](public java.lang.Object[][] picard.util.BedToIntervalListTest.testBedToIntervalListSequenceDictionaryDataProvider(), class picard.util.BedToIntervalListTest) |
0s |
passed |
| testDataProviderswithDP[316](public java.lang.Object[][] picard.util.BedToIntervalListTest.testBedToIntervalListSequenceDictionaryBadDataProvider(), class picard.util.BedToIntervalListTest) |
0s |
passed |
| testDataProviderswithDP[317](public java.lang.Object[][] picard.util.BedToIntervalListTest.testBedToIntervalListOutOfBoundsDataProvider(), class picard.util.BedToIntervalListTest) |
0s |
passed |
| testDataProviderswithDP[318](public java.lang.Object[][] picard.util.BedToIntervalListTest.testLengthZeroIntervalsSkippedProvider(), class picard.util.BedToIntervalListTest) |
0s |
passed |
| testDataProviderswithDP[319](public java.util.Iterator picard.util.LiftoverVcfTest.indelFlipDataWithOriginalAllele(), class picard.util.LiftoverVcfTest) |
0.002s |
passed |
| testDataProviderswithDP[31](public java.lang.Object[][] picard.fingerprint.HaplotypeProbabilitiesTest.dataTestHaplotypeProbabilitiesFromSequenceAddToProbs(), class picard.fingerprint.HaplotypeProbabilitiesTest) |
0.001s |
passed |
| testDataProviderswithDP[320](public java.util.Iterator picard.util.LiftoverVcfTest.indelFlipData(), class picard.util.LiftoverVcfTest) |
0s |
passed |
| testDataProviderswithDP[321](public java.util.Iterator picard.util.LiftoverVcfTest.noCallAndSymbolicData(), class picard.util.LiftoverVcfTest) |
0.003s |
passed |
| testDataProviderswithDP[322](public java.lang.Object[][] picard.util.LiftoverVcfTest.dataTestHaplotypeProbabilitiesFromSequenceAddToProbs(), class picard.util.LiftoverVcfTest) |
0.001s |
passed |
| testDataProviderswithDP[323](public java.util.Iterator picard.util.LiftoverVcfTest.cleanIndelNoFlipData(), class picard.util.LiftoverVcfTest) |
0.001s |
passed |
| testDataProviderswithDP[324](public java.lang.Object[][] picard.util.LiftoverVcfTest.dataTestVcfSorted(), class picard.util.LiftoverVcfTest) |
0s |
passed |
| testDataProviderswithDP[325](public java.lang.Object[][] picard.util.LiftoverVcfTest.dataTestWriteOriginalPosition(), class picard.util.LiftoverVcfTest) |
0s |
passed |
| testDataProviderswithDP[326](public java.util.Iterator picard.util.LiftoverVcfTest.leftAlignAllelesData(), class picard.util.LiftoverVcfTest) |
0.002s |
passed |
| testDataProviderswithDP[327](public java.util.Iterator picard.util.LiftoverVcfTest.indelNoFlipData(), class picard.util.LiftoverVcfTest) |
0.001s |
passed |
| testDataProviderswithDP[328](public java.util.Iterator picard.util.LiftoverVcfTest.snpWithChangedRef(), class picard.util.LiftoverVcfTest) |
0s |
passed |
| testDataProviderswithDP[329](public java.lang.Object[][] picard.util.LiftoverVcfTest.liftoverReverseStrand(), class picard.util.LiftoverVcfTest) |
0.001s |
passed |
| testDataProviderswithDP[32](public java.lang.Object[][] picard.fingerprint.HaplotypeProbabilitiesTest.dataTestHaplotypeProbabilitiesFromContaminatorSequenceAddToProbs(), class picard.fingerprint.HaplotypeProbabilitiesTest) |
0.001s |
passed |
| testDataProviderswithDP[330](java.util.Iterator picard.util.LiftoverVcfTest.testWriteVcfData(), class picard.util.LiftoverVcfTest) |
0s |
passed |
| testDataProviderswithDP[331](public java.lang.Object[][] picard.util.ClippingUtilityTest.testAdapterInAllReadPositionsDataProvider(), class picard.util.ClippingUtilityTest) |
0s |
passed |
| testDataProviderswithDP[332](public java.lang.Object[][] picard.util.ClippingUtilityTest.getClipPairedTestData(), class picard.util.ClippingUtilityTest) |
0s |
passed |
| testDataProviderswithDP[333](public java.lang.Object[][] picard.util.ClippingUtilityTest.testAdapterListTruncationDataProvider(), class picard.util.ClippingUtilityTest) |
0.001s |
passed |
| testDataProviderswithDP[334](public java.lang.Object[][] picard.util.ClippingUtilityTest.getClipTestData(), class picard.util.ClippingUtilityTest) |
0s |
passed |
| testDataProviderswithDP[335](public java.lang.Object[][] picard.util.ScatterIntervalsByNsTest.testSegregate(), class picard.util.ScatterIntervalsByNsTest) |
0s |
passed |
| testDataProviderswithDP[336](public java.lang.Object[][] picard.util.EditDistanceQueriesTest.levensteinDistanceSymmetricData(), class picard.util.EditDistanceQueriesTest) |
0.001s |
passed |
| testDataProviderswithDP[337](private java.lang.Object[][] picard.util.EditDistanceQueriesTest.levensteinDistanceWithNoCallsData(), class picard.util.EditDistanceQueriesTest) |
0s |
passed |
| testDataProviderswithDP[338](private java.lang.Object[][] picard.util.TextFileParsersTest.getTabbedData(), class picard.util.TextFileParsersTest) |
0s |
passed |
| testDataProviderswithDP[339](private java.lang.Object[][] picard.util.TextFileParsersTest.getLeadingWhiteSpaceData(), class picard.util.TextFileParsersTest) |
0s |
passed |
| testDataProviderswithDP[33](public java.lang.Object[][] picard.fingerprint.HaplotypeMapTest.haplotypeMapForWriting(), class picard.fingerprint.HaplotypeMapTest) |
0.001s |
passed |
| testDataProviderswithDP[340](private java.lang.Object[][] picard.util.TextFileParsersTest.getMultiFileParsingData(), class picard.util.TextFileParsersTest) |
0s |
passed |
| testDataProviderswithDP[341](private java.lang.Object[][] picard.util.TextFileParsersTest.getTooManyWordsData(), class picard.util.TextFileParsersTest) |
0s |
passed |
| testDataProviderswithDP[342](private java.lang.Object[][] picard.util.TextFileParsersTest.getNoGroupingData(), class picard.util.TextFileParsersTest) |
0s |
passed |
| testDataProviderswithDP[343](private java.lang.Object[][] picard.util.TextFileParsersTest.getWordCountCalculationData(), class picard.util.TextFileParsersTest) |
0s |
passed |
| testDataProviderswithDP[344](private java.lang.Object[][] picard.util.TextFileParsersTest.getBasicInputParserData(), class picard.util.TextFileParsersTest) |
0s |
passed |
| testDataProviderswithDP[345](public java.lang.Object[][] picard.util.LiftoverUtilsTest.swapRefAltData(), class picard.util.LiftoverUtilsTest) |
0s |
passed |
| testDataProviderswithDP[346](public java.util.Iterator picard.util.LiftoverUtilsTest.allelesToStringData(), class picard.util.LiftoverUtilsTest) |
0s |
passed |
| testDataProviderswithDP[347](public java.lang.Object[][] picard.util.IntervalListToolsTest.actionAndTotalBasesWithUniqueData(), class picard.util.IntervalListToolsTest) |
0.001s |
passed |
| testDataProviderswithDP[348](public java.lang.Object[][] picard.util.IntervalListToolsTest.combineAbuttingIntervals(), class picard.util.IntervalListToolsTest) |
0s |
passed |
| testDataProviderswithDP[349](public java.lang.Object[][] picard.util.IntervalListToolsTest.actionAndTotalBasesData(), class picard.util.IntervalListToolsTest) |
0s |
passed |
| testDataProviderswithDP[34](public java.lang.Object[][] picard.fingerprint.HaplotypeMapTest.haplotypeMapReaderData(), class picard.fingerprint.HaplotypeMapTest) |
0s |
passed |
| testDataProviderswithDP[350](public java.lang.Object[][] picard.util.IntervalListToolsTest.actionAndTotalBasesWithDontMergeAbuttingData(), class picard.util.IntervalListToolsTest) |
0.001s |
passed |
| testDataProviderswithDP[351](public static java.util.Iterator picard.util.IntervalListToolsTest.testScatterTestcases(), class picard.util.IntervalListToolsTest) |
0.017s |
passed |
| testDataProviderswithDP[352](public java.util.Iterator picard.util.IntervalListToolsTest.ActionsTest(), class picard.util.IntervalListToolsTest) |
0.001s |
passed |
| testDataProviderswithDP[353](public java.lang.Object[][] picard.util.IntervalListToolsTest.actionAndTotalBasesWithInvertData(), class picard.util.IntervalListToolsTest) |
0.001s |
passed |
| testDataProviderswithDP[354](public java.lang.Object[][] picard.util.AlleleSubsettingUtilsTest.makeUpdatePLsAndADData(), class picard.util.AlleleSubsettingUtilsTest) |
0.004s |
passed |
| testDataProviderswithDP[355](java.util.Iterator picard.util.AlleleSubsettingUtilsTest.swapAlleleData(), class picard.util.AlleleSubsettingUtilsTest) |
0s |
passed |
| testDataProviderswithDP[356](public java.lang.Object[][] picard.util.IlluminaUtilTest.solexaQualStrToPhredsToPhreds(), class picard.util.IlluminaUtilTest) |
0s |
passed |
| testDataProviderswithDP[357](public java.lang.Object[][] picard.util.IlluminaUtilTest.readNames(), class picard.util.IlluminaUtilTest) |
0s |
passed |
| testDataProviderswithDP[358](public java.lang.Object[][] picard.util.UnsignedTypeUtilTest.uByteData(), class picard.util.UnsignedTypeUtilTest) |
0s |
passed |
| testDataProviderswithDP[359](public java.lang.Object[][] picard.util.UnsignedTypeUtilTest.uIntData(), class picard.util.UnsignedTypeUtilTest) |
0s |
passed |
| testDataProviderswithDP[35](java.lang.Object[][] picard.fingerprint.CheckFingerprintTest.vcfsToFingerprint(), class picard.fingerprint.CheckFingerprintTest) |
0.006s |
passed |
| testDataProviderswithDP[360](public java.lang.Object[][] picard.util.UnsignedTypeUtilTest.uShortData(), class picard.util.UnsignedTypeUtilTest) |
0s |
passed |
| testDataProviderswithDP[361](public final java.lang.Object[][] picard.cmdline.PicardCommandLineTest.getIsLegacyPicardStyle(), class picard.cmdline.PicardCommandLineTest) |
0.011s |
passed |
| testDataProviderswithDP[362](public java.lang.Object[][] picard.annotation.SortGffTest.testSortByDictDataProvider(), class picard.annotation.SortGffTest) |
0.001s |
passed |
| testDataProviderswithDP[363](public java.lang.Object[][] picard.annotation.SortGffTest.testSortGffDataProvider(), class picard.annotation.SortGffTest) |
0s |
passed |
| testDataProviderswithDP[364](public java.lang.Object[][] picard.nio.PicardHtsPathUnitTest.getReplaceExtensionTestInput(), class picard.nio.PicardHtsPathUnitTest) |
0s |
passed |
| testDataProviderswithDP[365](public java.lang.Object[][] picard.nio.PicardHtsPathUnitTest.getReplaceExtensionFailureTestInput(), class picard.nio.PicardHtsPathUnitTest) |
0s |
passed |
| testDataProviderswithDP[366](public java.lang.Object[][] picard.nio.PicardBucketUtilsTest.testGetTempFilePathDataProvider(), class picard.nio.PicardBucketUtilsTest) |
0.001s |
passed |
| testDataProviderswithDP[367](public java.lang.Object[][] picard.nio.PicardBucketUtilsTest.getVariousPathsForPrefetching(), class picard.nio.PicardBucketUtilsTest) |
0s |
passed |
| testDataProviderswithDP[368](public java.util.Iterator picard.metrics.MetricBaseTest.getMetricClasses(), class picard.metrics.MetricBaseTest) |
0.007s |
passed |
| testDataProviderswithDP[369](public java.util.Iterator picard.TestDataProviders.testAllDataProvidersData() throws java.lang.Exception, class picard.TestDataProviders) |
0.013s |
passed |
| testDataProviderswithDP[36](java.lang.Object[][] picard.fingerprint.CheckFingerprintTest.extractObservedSampleNameExceptionDataProvider(), class picard.fingerprint.CheckFingerprintTest) |
0.005s |
passed |
| testDataProviderswithDP[37](java.lang.Object[][] picard.fingerprint.CheckFingerprintTest.samsToFingerprint(), class picard.fingerprint.CheckFingerprintTest) |
0.005s |
passed |
| testDataProviderswithDP[38](java.lang.Object[][] picard.fingerprint.CheckFingerprintTest.containsSampleDataProvider(), class picard.fingerprint.CheckFingerprintTest) |
0.005s |
passed |
| testDataProviderswithDP[39](java.lang.Object[][] picard.fingerprint.CheckFingerprintTest.testMismatchingAndMissingDataProvider(), class picard.fingerprint.CheckFingerprintTest) |
0.006s |
passed |
| testDataProviderswithDP[3](public java.lang.Object[][] picard.vcf.GenotypeConcordanceTest.genotypeConcordanceDetermineStateDataProvider(), class picard.vcf.GenotypeConcordanceTest) |
0s |
passed |
| testDataProviderswithDP[40](public java.lang.Object[][] picard.fingerprint.CheckFingerprintTest.badData(), class picard.fingerprint.CheckFingerprintTest) |
0.005s |
passed |
| testDataProviderswithDP[41](java.lang.Object[][] picard.fingerprint.CheckFingerprintTest.extractObservedSampleNameDataProvider(), class picard.fingerprint.CheckFingerprintTest) |
0.006s |
passed |
| testDataProviderswithDP[42](public static java.lang.Object[][] picard.fingerprint.CalculateFingerprintMetricsTest.testFingerprintMetricData(), class picard.fingerprint.CalculateFingerprintMetricsTest) |
0s |
passed |
| testDataProviderswithDP[43](java.lang.Object[][] picard.fingerprint.FingerprintCheckerTest.samFilesforFingerprinting(), class picard.fingerprint.FingerprintCheckerTest) |
0s |
passed |
| testDataProviderswithDP[44](public java.util.Iterator picard.fingerprint.FingerprintCheckerTest.pLohData(), class picard.fingerprint.FingerprintCheckerTest) |
0.001s |
passed |
| testDataProviderswithDP[45](java.lang.Object[][] picard.fingerprint.FingerprintCheckerTest.mergeIsSafeProvider(), class picard.fingerprint.FingerprintCheckerTest) |
0.001s |
passed |
| testDataProviderswithDP[46](public java.lang.Object[][] picard.fingerprint.FingerprintCheckerTest.testCheckFingerprintsSamDataProvider(), class picard.fingerprint.FingerprintCheckerTest) |
0s |
passed |
| testDataProviderswithDP[47](public java.util.Iterator picard.fingerprint.FingerprintCheckerTest.queryableData() throws java.io.IOException, class picard.fingerprint.FingerprintCheckerTest) |
0.006s |
passed |
| testDataProviderswithDP[48](java.util.Iterator picard.fingerprint.FingerprintCheckerTest.deepDataProvider(), class picard.fingerprint.FingerprintCheckerTest) |
0s |
passed |
| testDataProviderswithDP[49](public java.lang.Object[][] picard.fingerprint.FingerprintCheckerTest.testCheckFingerprintsSamDataProviderFail(), class picard.fingerprint.FingerprintCheckerTest) |
0s |
passed |
| testDataProviderswithDP[4](public java.lang.Object[][] picard.vcf.GenotypeConcordanceTest.getGenotypeConcordanceTestFileData(), class picard.vcf.GenotypeConcordanceTest) |
0s |
passed |
| testDataProviderswithDP[50](public java.util.Iterator picard.fingerprint.FingerprintCheckerTest.queryableSam() throws java.io.IOException, class picard.fingerprint.FingerprintCheckerTest) |
0.027s |
passed |
| testDataProviderswithDP[51](public java.lang.Object[][] picard.fingerprint.FingerprintCheckerTest.testCheckFingerprintsVcfDataProvider(), class picard.fingerprint.FingerprintCheckerTest) |
0.001s |
passed |
| testDataProviderswithDP[52](public java.lang.Object[][] picard.fingerprint.CrosscheckReadGroupFingerprintsTest.bamFilesLBs(), class picard.fingerprint.CrosscheckReadGroupFingerprintsTest) |
0.125s |
passed |
| testDataProviderswithDP[53](public java.lang.Object[][] picard.fingerprint.CrosscheckReadGroupFingerprintsTest.newParametersData(), class picard.fingerprint.CrosscheckReadGroupFingerprintsTest) |
0.150s |
passed |
| testDataProviderswithDP[54](public java.lang.Object[][] picard.fingerprint.CrosscheckReadGroupFingerprintsTest.bamFilesRGs(), class picard.fingerprint.CrosscheckReadGroupFingerprintsTest) |
0.123s |
passed |
| testDataProviderswithDP[55](public java.lang.Object[][] picard.fingerprint.CrosscheckReadGroupFingerprintsTest.bamFilesSources(), class picard.fingerprint.CrosscheckReadGroupFingerprintsTest) |
0.123s |
passed |
| testDataProviderswithDP[56](public java.lang.Object[][] picard.fingerprint.CrosscheckReadGroupFingerprintsTest.bamFilesSMs(), class picard.fingerprint.CrosscheckReadGroupFingerprintsTest) |
0.129s |
passed |
| testDataProviderswithDP[57](public java.util.Iterator picard.fingerprint.HaplotypeProbabilityOfNormalGivenTumorTest.testGetLikelihoodsData(), class picard.fingerprint.HaplotypeProbabilityOfNormalGivenTumorTest) |
0s |
passed |
| testDataProviderswithDP[58](public java.lang.Object[][] picard.flow.FlowBasedKeyCodecUnitTest.getTestData(), class picard.flow.FlowBasedKeyCodecUnitTest) |
0s |
passed |
| testDataProviderswithDP[59](public java.lang.Object[][] picard.flow.FlowBasedKeyCodecUnitTest.makeByteArrayTests(), class picard.flow.FlowBasedKeyCodecUnitTest) |
0s |
passed |
| testDataProviderswithDP[5](public java.lang.Object[][] picard.vcf.CallingMetricAccumulatorTest.getSingletonSampleData(), class picard.vcf.CallingMetricAccumulatorTest) |
0.003s |
passed |
| testDataProviderswithDP[60](public java.lang.Object[][] picard.sam.SamFormatConverterTest.conversionCases(), class picard.sam.SamFormatConverterTest) |
0.001s |
passed |
| testDataProviderswithDP[61](public java.lang.Object[][] picard.sam.PipedDataTest.getPipedInputTestData() throws java.io.IOException, class picard.sam.PipedDataTest) |
0.004s |
passed |
| testDataProviderswithDP[62](java.lang.Object[][] picard.sam.AddOATagTest.testIntervalListData(), class picard.sam.AddOATagTest) |
0s |
passed |
| testDataProviderswithDP[63](java.lang.Object[][] picard.sam.AddOATagTest.testOAData(), class picard.sam.AddOATagTest) |
0s |
passed |
| testDataProviderswithDP[64](public java.lang.Object[][] picard.sam.SamToFastqTest.missingRgFiles(), class picard.sam.SamToFastqTest) |
0s |
passed |
| testDataProviderswithDP[65](public java.lang.Object[][] picard.sam.SamToFastqTest.badFiles(), class picard.sam.SamToFastqTest) |
0s |
passed |
| testDataProviderswithDP[66](public java.lang.Object[][] picard.sam.SamToFastqTest.okFiles(), class picard.sam.SamToFastqTest) |
0s |
passed |
| testDataProviderswithDP[67](public java.lang.Object[][] picard.sam.SamToFastqTest.okGroupedFiles(), class picard.sam.SamToFastqTest) |
0s |
passed |
| testDataProviderswithDP[68](public java.lang.Object[][] picard.sam.SamToFastqTest.trimmedData(), class picard.sam.SamToFastqTest) |
0s |
passed |
| testDataProviderswithDP[69](public java.lang.Object[][] picard.sam.SamToFastqTest.clippingTests(), class picard.sam.SamToFastqTest) |
0s |
passed |
| testDataProviderswithDP[6](public java.lang.Object[][] picard.vcf.AccumulateVariantCallingMetricsTest.shardDataProvider(), class picard.vcf.AccumulateVariantCallingMetricsTest) |
0s |
passed |
| testDataProviderswithDP[70](public java.lang.Object[][] picard.sam.SamToFastqTest.badGroupedFiles(), class picard.sam.SamToFastqTest) |
0s |
passed |
| testDataProviderswithDP[71](public java.lang.Object[][] picard.sam.FastqToSamTest.badFormatFiles(), class picard.sam.FastqToSamTest) |
0.001s |
passed |
| testDataProviderswithDP[72](public java.lang.Object[][] picard.sam.FastqToSamTest.okPairNames(), class picard.sam.FastqToSamTest) |
0s |
passed |
| testDataProviderswithDP[73](public java.lang.Object[][] picard.sam.FastqToSamTest.okPairedFiles(), class picard.sam.FastqToSamTest) |
0.001s |
passed |
| testDataProviderswithDP[74](public java.lang.Object[][] picard.sam.FastqToSamTest.badPairedFiles(), class picard.sam.FastqToSamTest) |
0s |
passed |
| testDataProviderswithDP[75](public java.lang.Object[][] picard.sam.FastqToSamTest.badVersionFiles(), class picard.sam.FastqToSamTest) |
0s |
passed |
| testDataProviderswithDP[76](public java.lang.Object[][] picard.sam.FastqToSamTest.permissiveFormatFiles(), class picard.sam.FastqToSamTest) |
0.001s |
passed |
| testDataProviderswithDP[77](public java.lang.Object[][] picard.sam.FastqToSamTest.okVersionFiles(), class picard.sam.FastqToSamTest) |
0s |
passed |
| testDataProviderswithDP[78](public java.lang.Object[][] picard.sam.FastqToSamTest.badPairNames(), class picard.sam.FastqToSamTest) |
0.001s |
passed |
| testDataProviderswithDP[79](public java.lang.Object[][] picard.sam.SamToFastqWithTagsTest.queryNonExistantTag(), class picard.sam.SamToFastqWithTagsTest) |
0s |
passed |
| testDataProviderswithDP[7](public java.lang.Object[][] picard.vcf.GatherVcfsTest.vcfshards(), class picard.vcf.GatherVcfsTest) |
0.216s |
passed |
| testDataProviderswithDP[80](public java.lang.Object[][] picard.sam.SamToFastqWithTagsTest.argumentCombinationsdata(), class picard.sam.SamToFastqWithTagsTest) |
0s |
passed |
| testDataProviderswithDP[81](public java.lang.Object[][] picard.sam.SamToFastqWithTagsTest.testTagGroupFastqData(), class picard.sam.SamToFastqWithTagsTest) |
0s |
passed |
| testDataProviderswithDP[82](public java.lang.Object[][] picard.sam.SamToFastqWithTagsTest.okGroupedFiles(), class picard.sam.SamToFastqWithTagsTest) |
0s |
passed |
| testDataProviderswithDP[83](public java.lang.Object[][] picard.sam.AbstractAlignmentMergerTest.readPositionIgnoringSoftClips(), class picard.sam.AbstractAlignmentMergerTest) |
0s |
passed |
| testDataProviderswithDP[84](public java.util.Iterator picard.sam.AbstractAlignmentMergerTest.overlapReadDataWithSwaps(), class picard.sam.AbstractAlignmentMergerTest) |
0s |
passed |
| testDataProviderswithDP[85](public java.lang.Object[][] picard.sam.AbstractAlignmentMergerTest.referencePositionAndReadPositions(), class picard.sam.AbstractAlignmentMergerTest) |
0s |
passed |
| testDataProviderswithDP[86](public java.lang.Object[][] picard.sam.FilterSamReadsTest.dataTestJsFilter(), class picard.sam.FilterSamReadsTest) |
0s |
passed |
| testDataProviderswithDP[87](public java.lang.Object[][] picard.sam.FilterSamReadsTest.dataTestPairedIntervalFilter(), class picard.sam.FilterSamReadsTest) |
0s |
passed |
| testDataProviderswithDP[88](public java.lang.Object[][] picard.sam.FilterSamReadsTest.dataTestTagFilter(), class picard.sam.FilterSamReadsTest) |
0.001s |
passed |
| testDataProviderswithDP[89](public java.lang.Object[][] picard.sam.FilterSamReadsTest.badArgumentCombinationsdata(), class picard.sam.FilterSamReadsTest) |
0s |
passed |
| testDataProviderswithDP[8](public static java.lang.Object[][] picard.vcf.UpdateVcfSequenceDictionaryTest.outputFies(), class picard.vcf.UpdateVcfSequenceDictionaryTest) |
0s |
passed |
| testDataProviderswithDP[90](public java.lang.Object[][] picard.sam.FilterSamReadsTest.dataTestDebugOption(), class picard.sam.FilterSamReadsTest) |
0s |
passed |
| testDataProviderswithDP[91](public java.lang.Object[][] picard.sam.FilterSamReadsTest.dataTestReadFilter(), class picard.sam.FilterSamReadsTest) |
0s |
passed |
| testDataProviderswithDP[92](public java.lang.Object[][] picard.sam.SamErrorMetric.BaseErrorCalculationTest.testOverlappingErrorCalculatorWithManyReadsData() throws java.io.IOException, class picard.sam.SamErrorMetric.BaseErrorCalculationTest) |
0.030s |
passed |
| testDataProviderswithDP[93](public java.lang.Object[][] picard.sam.SamErrorMetric.ReadBaseStratificationTest.baseStratifierData(), class picard.sam.SamErrorMetric.ReadBaseStratificationTest) |
0.001s |
passed |
| testDataProviderswithDP[94](public java.util.Iterator picard.sam.SamErrorMetric.ReadBaseStratificationTest.readsForChimericTest(), class picard.sam.SamErrorMetric.ReadBaseStratificationTest) |
0.003s |
passed |
| testDataProviderswithDP[95](public java.lang.Object[][] picard.sam.SamErrorMetric.ReadBaseStratificationTest.provideForTestGetIndelElement(), class picard.sam.SamErrorMetric.ReadBaseStratificationTest) |
0.001s |
passed |
| testDataProviderswithDP[96](public java.lang.Object[][] picard.sam.SamErrorMetric.ReadBaseStratificationTest.homopolymerStratifierData(), class picard.sam.SamErrorMetric.ReadBaseStratificationTest) |
0s |
passed |
| testDataProviderswithDP[97](public java.lang.Object[][] picard.sam.SamErrorMetric.CollectSamErrorMetricsTest.provideForTestIndelErrors(), class picard.sam.SamErrorMetric.CollectSamErrorMetricsTest) |
0.001s |
passed |
| testDataProviderswithDP[98](public java.lang.Object[][] picard.sam.SamErrorMetric.CollectSamErrorMetricsTest.parseDirectiveBadData(), class picard.sam.SamErrorMetric.CollectSamErrorMetricsTest) |
0s |
passed |
| testDataProviderswithDP[99](public java.lang.Object[][] picard.sam.SamErrorMetric.CollectSamErrorMetricsTest.oneCovariateIndelErrorMetricsDataProvider(), class picard.sam.SamErrorMetric.CollectSamErrorMetricsTest) |
0s |
passed |
| testDataProviderswithDP[9](public static java.lang.Object[][] picard.fastq.BamToBfqTest.inputs() throws java.io.IOException, class picard.fastq.BamToBfqTest) |
0s |
passed |