from .adapterremoval import AdapterRemovalRunner
from .bowtie2 import Bowtie2Runner
from .fastqc import FastQCRunner
from .samtools import SamToolsRunner
from .picard import PicardRunner
from .split_by_ref import SplitByRefRunner
from .merge_by_horizon import MergeByHorizonRunner
from .filter_presence import FilterPresenceRunner
from .clean_sq import CleanSQRunner
from .mapdamage import MapDamageRunner