# This file created by conda-build 24.5.1
# meta.yaml template originally from:
# /opt/recipe, last modified Thu Sep 12 21:11:06 2024
# ------------------------------------------------

package:
  name: samtools
  version: '1.21'
source:
  sha256: 05724b083a6b6f0305fcae5243a056cc36cf826309c3cb9347a6b89ee3fc5ada
  url: https://github.com/samtools/samtools/releases/download/1.21/samtools-1.21.tar.bz2
build:
  number: '0'
  run_exports:
    - samtools >=1.21,<2.0a0
  string: h50ea8bc_0
requirements:
  build:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - _sysroot_linux-64_curr_repodata_hack 3 h69a702a_16
    - binutils_impl_linux-64 2.40 ha1999f0_7
    - binutils_linux-64 2.40 hb3c18ed_2
    - gcc_impl_linux-64 12.4.0 hb2e57f8_1
    - gcc_linux-64 12.4.0 h6b7512a_2
    - kernel-headers_linux-64 3.10.0 h4a8ded7_16
    - ld_impl_linux-64 2.40 hf3520f5_7
    - libgcc 14.1.0 h77fa898_1
    - libgcc-devel_linux-64 12.4.0 ha4f9413_101
    - libgomp 14.1.0 h77fa898_1
    - libsanitizer 12.4.0 h46f95d5_1
    - libstdcxx 14.1.0 hc0a3c3a_1
    - make 4.4.1 hb9d3cd8_1
    - sysroot_linux-64 2.17 h4a8ded7_16
    - tzdata 2024a h8827d51_1
  host:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - bzip2 1.0.8 h4bc722e_7
    - c-ares 1.32.3 h4bc722e_0
    - ca-certificates 2024.8.30 hbcca054_0
    - htslib 1.21 h5efdd21_0
    - keyutils 1.6.1 h166bdaf_0
    - krb5 1.21.3 h659f571_0
    - libcurl 8.8.0 hca28451_1
    - libdeflate 1.20 hd590300_0
    - libedit 3.1.20191231 he28a2e2_2
    - libev 4.33 hd590300_2
    - libgcc 14.1.0 h77fa898_1
    - libgcc-ng 14.1.0 h69a702a_1
    - libgomp 14.1.0 h77fa898_1
    - libnghttp2 1.58.0 h47da74e_1
    - libssh2 1.11.0 h0841786_0
    - libstdcxx 14.1.0 hc0a3c3a_1
    - libstdcxx-ng 14.1.0 h4852527_1
    - libzlib 1.2.13 h4ab18f5_6
    - ncurses 6.5 he02047a_1
    - openssl 3.3.2 hb9d3cd8_0
    - xz 5.2.6 h166bdaf_0
    - zlib 1.2.13 h4ab18f5_6
    - zstd 1.5.6 ha6fb4c9_0
  run:
    - htslib >=1.21,<1.22.0a0
    - libgcc >=12
    - libzlib >=1.2.13,<2.0a0
    - ncurses >=6.5,<7.0a0
test:
  commands:
    - samtools --help
    - samtools view 'https://example.com' 2>&1 | grep 'fail to read the header' -q
about:
  home: https://github.com/samtools/samtools
  license: MIT
  license_file: LICENSE
  summary: Tools for dealing with SAM, BAM and CRAM files
extra:
  additional-platforms:
    - linux-aarch64
    - osx-arm64
  copy_test_source_files: true
  final: true
  identifiers:
    - biotools:samtools
    - usegalaxy-eu:samtools_flagstat
