# This file created by conda-build 3.24.0
# meta.yaml template originally from:
# /opt/recipe, last modified Tue Sep 26 23:15:31 2023
# ------------------------------------------------

package:
  name: samtools
  version: '1.18'
source:
  sha256: d686ffa621023ba61822a2a50b70e85d0b18e79371de5adb07828519d3fc06e1
  url: https://github.com/samtools/samtools/releases/download/1.18/samtools-1.18.tar.bz2
build:
  number: '0'
  run_exports:
    - samtools >=1.18,<1.19.0a0
  string: hd87286a_0
requirements:
  build:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - binutils_impl_linux-64 2.40 hf600244_0
    - binutils_linux-64 2.40 hbdbef99_2
    - gcc_impl_linux-64 12.3.0 he2b93b0_2
    - gcc_linux-64 12.3.0 h76fc315_2
    - kernel-headers_linux-64 2.6.32 he073ed8_16
    - ld_impl_linux-64 2.40 h41732ed_0
    - libgcc-devel_linux-64 12.3.0 h8bca6fd_2
    - libgcc-ng 13.2.0 h807b86a_2
    - libgomp 13.2.0 h807b86a_2
    - libsanitizer 12.3.0 h0f45ef3_2
    - libstdcxx-ng 13.2.0 h7e041cc_2
    - make 4.3 hd18ef5c_1
    - sysroot_linux-64 2.12 he073ed8_16
  host:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - bzip2 1.0.8 h7f98852_4
    - c-ares 1.19.1 hd590300_0
    - ca-certificates 2023.7.22 hbcca054_0
    - htslib 1.17 h81da01d_2
    - keyutils 1.6.1 h166bdaf_0
    - krb5 1.21.2 h659d440_0
    - libcurl 8.3.0 hca28451_0
    - libdeflate 1.19 hd590300_0
    - libedit 3.1.20191231 he28a2e2_2
    - libev 4.33 h516909a_1
    - libgcc-ng 13.2.0 h807b86a_2
    - libgomp 13.2.0 h807b86a_2
    - libnghttp2 1.52.0 h61bc06f_0
    - libssh2 1.11.0 h0841786_0
    - libstdcxx-ng 13.2.0 h7e041cc_2
    - libzlib 1.2.13 hd590300_5
    - ncurses 6.4 hcb278e6_0
    - openssl 3.1.3 hd590300_0
    - xz 5.2.6 h166bdaf_0
    - zlib 1.2.13 hd590300_5
    - zstd 1.5.5 hfc55251_0
  run:
    - htslib >=1.17,<1.18.0a0
    - htslib >=1.17,<1.18.0a0
    - libgcc-ng >=12
    - libzlib >=1.2.13,<1.3.0a0
    - ncurses >=6.4,<7.0a0
    - zlib
test:
  commands:
    - samtools --help
    - samtools view 'https://example.com' 2>&1 | grep 'fail to read the header' -q
about:
  home: https://github.com/samtools/samtools
  license: MIT
  license_file: LICENSE
  summary: Tools for dealing with SAM, BAM and CRAM files
extra:
  copy_test_source_files: true
  final: true
  identifiers:
    - biotools:samtools
    - usegalaxy-eu:samtools_flagstat
