ó gbc@s‚ddlmZddlmZddlmZddlmZdefd„ƒYZdefd„ƒYZd „Zd „Z d S( iÿÿÿÿ(tOBOTerm(tOBOEntry(tstanzaIterator(tdebugtGOEntrycBseZdZRS(s¸ An entry of a GeneOntology .obo file. It can be a header (without a stanza name) or a stanza (with a stanza name between brackets). It inherits from the class dict. (t__name__t __module__t__doc__(((s5lib/python2.7/site-packages/obitools/obo/go/parser.pyRstGOTermcBseZdZd„ZRS(sG A stanza named 'Term'. It inherits from the class OBOTerm. cCsBtj||ƒd|kr2t|dƒdks>tdƒ‚dS(Nt namespaceisgAn OBOTerm must belong to one of the cell_component, molecular_function or biological_process namespace(Rt__init__tlentAssertionError(tselftstanza((s5lib/python2.7/site-packages/obitools/obo/go/parser.pyR s(RRRR (((s5lib/python2.7/site-packages/obitools/obo/go/parser.pyR scCs3tj|ƒ}|dkr%t|ƒSt|ƒSdS(s Dispatcher of stanza. @param stanza: a stanza composed of several lines. @type stanza: text @return: an C{OBOTerm} | C{OBOEntry} instance @note: The dispatcher treats differently the stanza which are OBO "Term" and the others. tTermN(RtparseStanzaNameR(Rt stanzaType((s5lib/python2.7/site-packages/obitools/obo/go/parser.pytGOEntryFactorys   ccs6t|ƒ}x#|D]}t|ƒt|ƒVqWdS(N(RRR(tfiletentrieste((s5lib/python2.7/site-packages/obitools/obo/go/parser.pytGOEntryIterator0s   N( tobitools.obo.parserRRRtloggingRRRRR(((s5lib/python2.7/site-packages/obitools/obo/go/parser.pyts