# This file created by conda-build 3.21.4
# meta.yaml template originally from:
# /opt/recipe, last modified Mon Feb 21 22:58:24 2022
# ------------------------------------------------

package:
  name: obitools
  version: 1.2.13
source:
  patches:
    - extractreads.patch
    - extractreads2.patch
  sha256: efc7b583a44f435f0663f9d67759a0e3d415ba1896e6132198cb135e35c34873
  url: https://pypi.io/packages/source/O/OBITools/OBITools-1.2.13.tar.gz
build:
  number: '4'
  script: /opt/conda/conda-bld/obitools_1645503871135/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_plac/bin/python
    -m pip install . --ignore-installed --no-deps -vv
  string: py27h9801fc8_4
requirements:
  build:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 1_gnu
    - binutils_impl_linux-64 2.36.1 h193b22a_2
    - binutils_linux-64 2.36 hf3e587d_5
    - gcc_impl_linux-64 10.3.0 hf2f2afa_12
    - gcc_linux-64 10.3.0 hc39de41_5
    - kernel-headers_linux-64 2.6.32 he073ed8_15
    - ld_impl_linux-64 2.36.1 hea4e1c9_2
    - libgcc-devel_linux-64 10.3.0 he6cfe16_12
    - libgcc-ng 11.2.0 h1d223b6_12
    - libgomp 11.2.0 h1d223b6_12
    - libsanitizer 10.3.0 h26c7422_12
    - libstdcxx-ng 11.2.0 he4da1e4_12
    - sysroot_linux-64 2.12 he073ed8_15
  host:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 1_gnu
    - alabaster 0.7.12 py_0
    - babel 2.9.1 pyh44b312d_0
    - brotlipy 0.7.0 py27h516909a_1000
    - ca-certificates 2021.10.8 ha878542_0
    - certifi 2019.11.28 py27h8c360ce_1
    - cffi 1.14.0 py27hd463f26_0
    - chardet 3.0.4 py27h8c360ce_1006
    - cryptography 2.8 py27h2c19f6a_2
    - cython 0.29.15 py27haf22ab1_1
    - docutils 0.16 py27h8c360ce_1
    - enum34 1.1.10 py27h8c360ce_1
    - idna 2.10 pyh9f0ad1d_0
    - imagesize 1.2.0 py_0
    - ipaddress 1.0.23 py_0
    - jinja2 2.11.3 pyh44b312d_0
    - ld_impl_linux-64 2.36.1 hea4e1c9_2
    - libffi 3.2.1 he1b5a44_1007
    - libgcc-ng 11.2.0 h1d223b6_12
    - libgomp 11.2.0 h1d223b6_12
    - libstdcxx-ng 11.2.0 he4da1e4_12
    - libzlib 1.2.11 h36c2ea0_1013
    - markupsafe 1.1.1 py27hdf8410d_1
    - ncurses 6.3 h9c3ff4c_0
    - openssl 1.1.1l h7f98852_0
    - packaging 20.9 pyh44b312d_0
    - pip 20.1.1 pyh9f0ad1d_0
    - pycparser 2.21 pyhd8ed1ab_0
    - pygments 2.5.2 py_0
    - pyopenssl 19.1.0 py_1
    - pyparsing 2.4.7 pyh9f0ad1d_0
    - pysocks 1.7.1 py27h8c360ce_1
    - python 2.7.15 h5a48372_1011_cpython
    - python_abi 2.7 1_cp27mu
    - pytz 2020.1 pyh9f0ad1d_0
    - readline 8.1 h46c0cb4_0
    - requests 2.25.1 pyhd3deb0d_0
    - setuptools 44.0.0 py27_0
    - six 1.16.0 pyh6c4a22f_0
    - snowballstemmer 2.2.0 pyhd8ed1ab_0
    - sphinx 1.8.5 py27_0
    - sphinxcontrib-websupport 1.2.4 pyh9f0ad1d_0
    - sqlite 3.37.0 h9cd32fc_0
    - tk 8.6.12 h27826a3_0
    - typing 3.7.4.1 py27h8c360ce_1
    - urllib3 1.26.8 pyhd8ed1ab_1
    - virtualenv 16.7.5 py_0
    - wheel 0.37.1 pyhd8ed1ab_0
    - zlib 1.2.11 h36c2ea0_1013
  run:
    - ipython >=3.0.0,<6.0
    - libgcc-ng >=10.3.0
    - python >=2.7,<2.8.0a0
    - python_abi 2.7.* *_cp27mu
    - xorg-libx11
    - xorg-libxau
test:
  commands:
    - ali2consensus -h
    - ecodbtaxstat -h
    - ecotag -h
    - ecotaxspecificity -h
    - ecotaxstat -h
    - illuminapairedend -h
    - ngsfilter -h
    - obiaddtaxids -h
    - obiannotate -h
    - obiclean -h
    - obicomplement -h
    - obiconvert -h
    - obicount -h
    - obicut -h
    - obidistribute -h
    - obiextract -h
    - obigrep -h
    - obihead -h
    - obijoinpairedend -h
    - obipr2 -h
    - obisample -h
    - obiselect -h
    - obisilva -h
    - obisort -h
    - obisplit -h
    - obistat -h
    - obisubset -h
    - obitab -h
    - obitail -h
    - obitaxonomy -h
    - obiuniq -h
    - oligotag -h
about:
  home: http://metabarcoding.org/obitools
  license: CeCILL-V2
  summary: The OBITools package is a set of programs specifically designed for analyzing
    NGS data in a DNA metabarcoding context, taking into account taxonomic information
extra:
  copy_test_source_files: true
  final: true
