# -*- coding: utf-8 -*- # Generated by the protocol buffer compiler. DO NOT EDIT! # source: ncbi/datasets/v1/datasets.proto """Generated protocol buffer code.""" from google.protobuf.internal import enum_type_wrapper from google.protobuf import descriptor as _descriptor from google.protobuf import message as _message from google.protobuf import reflection as _reflection from google.protobuf import symbol_database as _symbol_database # @@protoc_insertion_point(imports) _sym_db = _symbol_database.Default() from google.protobuf import timestamp_pb2 as google_dot_protobuf_dot_timestamp__pb2 from ncbi.datasets.options import openapi_pb2 as ncbi_dot_datasets_dot_options_dot_openapi__pb2 from ncbi.datasets.options import request_pb2 as ncbi_dot_datasets_dot_options_dot_request__pb2 from ncbi.datasets.v1 import gene_descriptor_pb2 as ncbi_dot_datasets_dot_v1_dot_gene__descriptor__pb2 from ncbi.datasets.v1.reports import biosample_pb2 as ncbi_dot_datasets_dot_v1_dot_reports_dot_biosample__pb2 DESCRIPTOR = _descriptor.FileDescriptor( 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, dependencies=[google_dot_protobuf_dot_timestamp__pb2.DESCRIPTOR,ncbi_dot_datasets_dot_options_dot_openapi__pb2.DESCRIPTOR,ncbi_dot_datasets_dot_options_dot_request__pb2.DESCRIPTOR,ncbi_dot_datasets_dot_v1_dot_gene__descriptor__pb2.DESCRIPTOR,ncbi_dot_datasets_dot_v1_dot_reports_dot_biosample__pb2.DESCRIPTOR,]) _COUNTTYPE = _descriptor.EnumDescriptor( name='CountType', full_name='ncbi.datasets.v1.CountType', filename=None, file=DESCRIPTOR, create_key=_descriptor._internal_create_key, values=[ _descriptor.EnumValueDescriptor( name='COUNT_TYPE_UNSPECIFIED', index=0, number=0, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='COUNT_TYPE_ASSEMBLY', index=1, number=1, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='COUNT_TYPE_GENE', index=2, number=2, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='COUNT_TYPE_tRNA', index=3, number=3, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='COUNT_TYPE_rRNA', index=4, number=4, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='COUNT_TYPE_snRNA', index=5, number=5, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='COUNT_TYPE_scRNA', index=6, number=6, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='COUNT_TYPE_snoRNA', index=7, number=7, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='COUNT_TYPE_PROTEIN_CODING', index=8, number=8, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='COUNT_TYPE_PSEUDO', index=9, number=9, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='COUNT_TYPE_TRANSPOSON', index=10, number=10, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='COUNT_TYPE_miscRNA', index=11, number=11, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='COUNT_TYPE_ncRNA', index=12, number=12, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='COUNT_TYPE_BIOLOGICAL_REGION', index=13, number=13, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='COUNT_TYPE_OTHER', index=14, number=14, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), ], containing_type=None, serialized_options=None, serialized_start=25083, serialized_end=25460, ) _sym_db.RegisterEnumDescriptor(_COUNTTYPE) CountType = enum_type_wrapper.EnumTypeWrapper(_COUNTTYPE) _SORTDIRECTION = _descriptor.EnumDescriptor( name='SortDirection', full_name='ncbi.datasets.v1.SortDirection', filename=None, file=DESCRIPTOR, create_key=_descriptor._internal_create_key, values=[ _descriptor.EnumValueDescriptor( name='SORT_DIRECTION_UNSPECIFIED', index=0, number=0, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='SORT_DIRECTION_ASCENDING', index=1, number=1, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='SORT_DIRECTION_DESCENDING', index=2, number=2, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), ], containing_type=None, serialized_options=None, serialized_start=25462, serialized_end=25570, ) _sym_db.RegisterEnumDescriptor(_SORTDIRECTION) SortDirection = enum_type_wrapper.EnumTypeWrapper(_SORTDIRECTION) _FASTA = _descriptor.EnumDescriptor( name='Fasta', full_name='ncbi.datasets.v1.Fasta', filename=None, file=DESCRIPTOR, create_key=_descriptor._internal_create_key, values=[ _descriptor.EnumValueDescriptor( name='FASTA_UNSPECIFIED', index=0, number=0, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='FASTA_GENE', index=1, number=1, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='FASTA_RNA', index=2, number=2, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='FASTA_PROTEIN', index=3, number=3, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='FASTA_GENE_FLANK', index=4, number=4, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='FASTA_CDS', index=5, number=5, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='FASTA_5P_UTR', index=6, number=6, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='FASTA_3P_UTR', index=7, number=7, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), ], containing_type=None, serialized_options=None, serialized_start=25573, serialized_end=25726, ) _sym_db.RegisterEnumDescriptor(_FASTA) Fasta = enum_type_wrapper.EnumTypeWrapper(_FASTA) _VIRUSTABLEFIELD = _descriptor.EnumDescriptor( name='VirusTableField', full_name='ncbi.datasets.v1.VirusTableField', filename=None, file=DESCRIPTOR, create_key=_descriptor._internal_create_key, values=[ _descriptor.EnumValueDescriptor( name='unspecified', index=0, number=0, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='nucleotide_accession', index=1, number=1, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='species_tax_id', index=2, number=2, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='species_name', index=3, number=3, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='genus', index=4, number=4, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='family', index=5, number=5, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='nucleotide_length', index=6, number=7, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='isolate_name', index=7, number=8, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='sequence_type', index=8, number=9, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='nuc_completeness', index=9, number=10, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='geo_location', index=10, number=11, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='us_state', index=11, number=12, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='host_name', index=12, number=13, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='host_tax_id', index=13, number=14, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='collection_date', index=14, number=15, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='bioproject', index=15, number=16, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='biosample', index=16, number=17, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='polyprotein_name', index=17, number=19, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='protein_name', index=18, number=20, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='protein_accession', index=19, number=21, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='protein_synonym', index=20, number=22, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='cds_span', index=21, number=23, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), ], containing_type=None, serialized_options=None, serialized_start=25729, serialized_end=26146, ) _sym_db.RegisterEnumDescriptor(_VIRUSTABLEFIELD) VirusTableField = enum_type_wrapper.EnumTypeWrapper(_VIRUSTABLEFIELD) _TABLEFORMAT = _descriptor.EnumDescriptor( name='TableFormat', full_name='ncbi.datasets.v1.TableFormat', filename=None, file=DESCRIPTOR, create_key=_descriptor._internal_create_key, values=[ _descriptor.EnumValueDescriptor( name='tsv', index=0, number=0, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='csv', index=1, number=1, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='jsonl', index=2, number=2, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), ], containing_type=None, serialized_options=None, serialized_start=26148, serialized_end=26190, ) _sym_db.RegisterEnumDescriptor(_TABLEFORMAT) TableFormat = enum_type_wrapper.EnumTypeWrapper(_TABLEFORMAT) COUNT_TYPE_UNSPECIFIED = 0 COUNT_TYPE_ASSEMBLY = 1 COUNT_TYPE_GENE = 2 COUNT_TYPE_tRNA = 3 COUNT_TYPE_rRNA = 4 COUNT_TYPE_snRNA = 5 COUNT_TYPE_scRNA = 6 COUNT_TYPE_snoRNA = 7 COUNT_TYPE_PROTEIN_CODING = 8 COUNT_TYPE_PSEUDO = 9 COUNT_TYPE_TRANSPOSON = 10 COUNT_TYPE_miscRNA = 11 COUNT_TYPE_ncRNA = 12 COUNT_TYPE_BIOLOGICAL_REGION = 13 COUNT_TYPE_OTHER = 14 SORT_DIRECTION_UNSPECIFIED = 0 SORT_DIRECTION_ASCENDING = 1 SORT_DIRECTION_DESCENDING = 2 FASTA_UNSPECIFIED = 0 FASTA_GENE = 1 FASTA_RNA = 2 FASTA_PROTEIN = 3 FASTA_GENE_FLANK = 4 FASTA_CDS = 5 FASTA_5P_UTR = 6 FASTA_3P_UTR = 7 unspecified = 0 nucleotide_accession = 1 species_tax_id = 2 species_name = 3 genus = 4 family = 5 nucleotide_length = 7 isolate_name = 8 sequence_type = 9 nuc_completeness = 10 geo_location = 11 us_state = 12 host_name = 13 host_tax_id = 14 collection_date = 15 bioproject = 16 biosample = 17 polyprotein_name = 19 protein_name = 20 protein_accession = 21 protein_synonym = 22 cds_span = 23 tsv = 0 csv = 1 jsonl = 2 _ASSEMBLYDATASETDESCRIPTORSFILTER_ASSEMBLYSOURCE = _descriptor.EnumDescriptor( name='AssemblySource', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptorsFilter.AssemblySource', filename=None, file=DESCRIPTOR, create_key=_descriptor._internal_create_key, values=[ _descriptor.EnumValueDescriptor( name='all', index=0, number=0, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='refseq', index=1, number=1, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='genbank', index=2, number=2, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), ], containing_type=None, serialized_options=None, serialized_start=2080, serialized_end=2130, ) _sym_db.RegisterEnumDescriptor(_ASSEMBLYDATASETDESCRIPTORSFILTER_ASSEMBLYSOURCE) _ASSEMBLYDATASETDESCRIPTORSFILTER_ASSEMBLYVERSION = _descriptor.EnumDescriptor( name='AssemblyVersion', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptorsFilter.AssemblyVersion', filename=None, file=DESCRIPTOR, create_key=_descriptor._internal_create_key, values=[ _descriptor.EnumValueDescriptor( name='current', index=0, number=0, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='all_assemblies', index=1, number=1, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), ], containing_type=None, serialized_options=None, serialized_start=2132, serialized_end=2182, ) _sym_db.RegisterEnumDescriptor(_ASSEMBLYDATASETDESCRIPTORSFILTER_ASSEMBLYVERSION) _ASSEMBLYDATASETDESCRIPTORSFILTER_ASSEMBLYLEVEL = _descriptor.EnumDescriptor( name='AssemblyLevel', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptorsFilter.AssemblyLevel', filename=None, file=DESCRIPTOR, create_key=_descriptor._internal_create_key, values=[ _descriptor.EnumValueDescriptor( name='chromosome', index=0, number=0, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='scaffold', index=1, number=1, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='contig', index=2, number=2, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='complete_genome', index=3, number=3, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), ], containing_type=None, serialized_options=None, serialized_start=2184, serialized_end=2262, ) _sym_db.RegisterEnumDescriptor(_ASSEMBLYDATASETDESCRIPTORSFILTER_ASSEMBLYLEVEL) _ASSEMBLYMETADATAREQUEST_CONTENTTYPE = _descriptor.EnumDescriptor( name='ContentType', full_name='ncbi.datasets.v1.AssemblyMetadataRequest.ContentType', filename=None, file=DESCRIPTOR, create_key=_descriptor._internal_create_key, values=[ _descriptor.EnumValueDescriptor( name='COMPLETE', index=0, number=0, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='ASSM_ACC', index=1, number=1, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), ], containing_type=None, serialized_options=None, serialized_start=3157, serialized_end=3198, ) _sym_db.RegisterEnumDescriptor(_ASSEMBLYMETADATAREQUEST_CONTENTTYPE) _ASSEMBLYDATASETDESCRIPTORSREQUEST_CONTENTTYPE = _descriptor.EnumDescriptor( name='ContentType', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptorsRequest.ContentType', filename=None, file=DESCRIPTOR, create_key=_descriptor._internal_create_key, values=[ _descriptor.EnumValueDescriptor( name='COMPLETE', index=0, number=0, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='ASSM_ACC', index=1, number=1, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='COUNTS', index=2, number=2, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), ], containing_type=None, serialized_options=None, serialized_start=3719, serialized_end=3772, ) _sym_db.RegisterEnumDescriptor(_ASSEMBLYDATASETDESCRIPTORSREQUEST_CONTENTTYPE) _ANNOTATIONFORASSEMBLY_TYPE = _descriptor.EnumDescriptor( name='Type', full_name='ncbi.datasets.v1.AnnotationForAssembly.Type', filename=None, file=DESCRIPTOR, create_key=_descriptor._internal_create_key, values=[ _descriptor.EnumValueDescriptor( name='DEFAULT', index=0, number=0, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='GENOME_GFF', index=1, number=1, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='GENOME_GBFF', index=2, number=2, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='GENOME_GB', index=3, number=2, serialized_options=b'\010\001', type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='RNA_FASTA', index=4, number=3, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='PROT_FASTA', index=5, number=4, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='GENOME_GTF', index=6, number=5, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='CDS_FASTA', index=7, number=6, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='ASM_STRUCT', index=8, number=7, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='GENOME_FASTA', index=9, number=8, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), ], containing_type=None, serialized_options=b'\020\001', serialized_start=5946, serialized_end=6117, ) _sym_db.RegisterEnumDescriptor(_ANNOTATIONFORASSEMBLY_TYPE) _ASSEMBLYDATASETREQUEST_RESOLUTION = _descriptor.EnumDescriptor( name='Resolution', full_name='ncbi.datasets.v1.AssemblyDatasetRequest.Resolution', filename=None, file=DESCRIPTOR, create_key=_descriptor._internal_create_key, values=[ _descriptor.EnumValueDescriptor( name='FULLY_HYDRATED', index=0, number=0, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='DATA_REPORT_ONLY', index=1, number=1, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), ], containing_type=None, serialized_options=None, serialized_start=7164, serialized_end=7218, ) _sym_db.RegisterEnumDescriptor(_ASSEMBLYDATASETREQUEST_RESOLUTION) _ORGANISM_RANKTYPE = _descriptor.EnumDescriptor( name='RankType', full_name='ncbi.datasets.v1.Organism.RankType', filename=None, file=DESCRIPTOR, create_key=_descriptor._internal_create_key, values=[ _descriptor.EnumValueDescriptor( name='NO_RANK', index=0, number=0, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='SUPERKINGDOM', index=1, number=1, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='KINGDOM', index=2, number=2, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='SUBKINGDOM', index=3, number=3, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='SUPERPHYLUM', index=4, number=4, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='SUBPHYLUM', index=5, number=5, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='PHYLUM', index=6, number=6, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='CLADE', index=7, number=31, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='SUPERCLASS', index=8, number=7, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='CLASS', index=9, number=8, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='SUBCLASS', index=10, number=9, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='INFRACLASS', index=11, number=10, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='COHORT', index=12, number=11, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='SUBCOHORT', index=13, number=12, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='SUPERORDER', index=14, number=13, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='ORDER', index=15, number=14, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='SUBORDER', index=16, number=15, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='INFRAORDER', index=17, number=16, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='PARVORDER', index=18, number=17, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='SUPERFAMILY', index=19, number=18, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='FAMILY', index=20, number=19, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='SUBFAMILY', index=21, number=20, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='GENUS', index=22, number=21, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='SUBGENUS', index=23, number=22, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='SPECIES_GROUP', index=24, number=23, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='SPECIES_SUBGROUP', index=25, number=24, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='SPECIES', index=26, number=25, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='SUBSPECIES', index=27, number=26, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='TRIBE', index=28, number=27, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='SUBTRIBE', index=29, number=28, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='FORMA', index=30, number=29, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='VARIETAS', index=31, number=30, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='STRAIN', index=32, number=320, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='SECTION', index=33, number=330, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='SUBSECTION', index=34, number=340, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='PATHOGROUP', index=35, number=350, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='SUBVARIETY', index=36, number=360, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='GENOTYPE', index=37, number=370, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='SEROTYPE', index=38, number=380, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='ISOLATE', index=39, number=390, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='MORPH', index=40, number=400, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='SERIES', index=41, number=410, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='FORMA_SPECIALIS', index=42, number=420, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='SEROGROUP', index=43, number=430, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='BIOTYPE', index=44, number=440, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), ], containing_type=None, serialized_options=None, serialized_start=8524, serialized_end=9193, ) _sym_db.RegisterEnumDescriptor(_ORGANISM_RANKTYPE) _ORGANISMQUERYREQUEST_TAXRANKFILTER = _descriptor.EnumDescriptor( name='TaxRankFilter', full_name='ncbi.datasets.v1.OrganismQueryRequest.TaxRankFilter', filename=None, file=DESCRIPTOR, create_key=_descriptor._internal_create_key, values=[ _descriptor.EnumValueDescriptor( name='species', index=0, number=0, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='higher_taxon', index=1, number=1, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), ], containing_type=None, serialized_options=None, serialized_start=9810, serialized_end=9856, ) _sym_db.RegisterEnumDescriptor(_ORGANISMQUERYREQUEST_TAXRANKFILTER) _ORGANISMQUERYREQUEST_TAXONRESOURCEFILTER = _descriptor.EnumDescriptor( name='TaxonResourceFilter', full_name='ncbi.datasets.v1.OrganismQueryRequest.TaxonResourceFilter', filename=None, file=DESCRIPTOR, create_key=_descriptor._internal_create_key, values=[ _descriptor.EnumValueDescriptor( name='all', index=0, number=0, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='genome', index=1, number=1, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='gene', index=2, number=2, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), ], containing_type=None, serialized_options=None, serialized_start=9858, serialized_end=9910, ) _sym_db.RegisterEnumDescriptor(_ORGANISMQUERYREQUEST_TAXONRESOURCEFILTER) _ORTHOLOGREQUEST_CONTENTTYPE = _descriptor.EnumDescriptor( name='ContentType', full_name='ncbi.datasets.v1.OrthologRequest.ContentType', filename=None, file=DESCRIPTOR, create_key=_descriptor._internal_create_key, values=[ _descriptor.EnumValueDescriptor( name='COMPLETE', index=0, number=0, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='IDS_ONLY', index=1, number=1, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), ], containing_type=None, serialized_options=None, serialized_start=10488, serialized_end=10529, ) _sym_db.RegisterEnumDescriptor(_ORTHOLOGREQUEST_CONTENTTYPE) _GENEDATASETREQUEST_CONTENTTYPE = _descriptor.EnumDescriptor( name='ContentType', full_name='ncbi.datasets.v1.GeneDatasetRequest.ContentType', filename=None, file=DESCRIPTOR, create_key=_descriptor._internal_create_key, values=[ _descriptor.EnumValueDescriptor( name='COMPLETE', index=0, number=0, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='IDS_ONLY', index=1, number=1, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), ], containing_type=None, serialized_options=None, serialized_start=10488, serialized_end=10529, ) _sym_db.RegisterEnumDescriptor(_GENEDATASETREQUEST_CONTENTTYPE) _GENEDATASETREQUEST_SORTFIELD = _descriptor.EnumDescriptor( name='SortField', full_name='ncbi.datasets.v1.GeneDatasetRequest.SortField', filename=None, file=DESCRIPTOR, create_key=_descriptor._internal_create_key, values=[ _descriptor.EnumValueDescriptor( name='SORT_FIELD_UNSPECIFIED', index=0, number=0, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='SORT_FIELD_GENE_ID', index=1, number=1, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='SORT_FIELD_GENE_TYPE', index=2, number=2, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='SORT_FIELD_GENE_SYMBOL', index=3, number=3, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), ], containing_type=None, serialized_options=None, serialized_start=11849, serialized_end=11966, ) _sym_db.RegisterEnumDescriptor(_GENEDATASETREQUEST_SORTFIELD) _ERROR_ASSEMBLYERRORCODE = _descriptor.EnumDescriptor( name='AssemblyErrorCode', full_name='ncbi.datasets.v1.Error.AssemblyErrorCode', filename=None, file=DESCRIPTOR, create_key=_descriptor._internal_create_key, values=[ _descriptor.EnumValueDescriptor( name='UNKNOWN_ASSEMBLY_ERROR_CODE', index=0, number=0, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='INVALID_BIOPROJECT_IDS', index=1, number=1, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='NO_ASSEMBLIES_FOR_BIOPROJECTS', index=2, number=2, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='INVALID_TAXON', index=3, number=3, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='MISSING_SEARCH_FIELD', index=4, number=4, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), ], containing_type=None, serialized_options=None, serialized_start=12418, serialized_end=12578, ) _sym_db.RegisterEnumDescriptor(_ERROR_ASSEMBLYERRORCODE) _ERROR_GENEERRORCODE = _descriptor.EnumDescriptor( name='GeneErrorCode', full_name='ncbi.datasets.v1.Error.GeneErrorCode', filename=None, file=DESCRIPTOR, create_key=_descriptor._internal_create_key, values=[ _descriptor.EnumValueDescriptor( name='UNKNOWN_GENE_ERROR_CODE', index=0, number=0, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='INCOMPLETE_LOOKUP_SYMBOL', index=1, number=5, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), ], containing_type=None, serialized_options=None, serialized_start=12580, serialized_end=12654, ) _sym_db.RegisterEnumDescriptor(_ERROR_GENEERRORCODE) _ERROR_VIRUSERRORCODE = _descriptor.EnumDescriptor( name='VirusErrorCode', full_name='ncbi.datasets.v1.Error.VirusErrorCode', filename=None, file=DESCRIPTOR, create_key=_descriptor._internal_create_key, values=[ _descriptor.EnumValueDescriptor( name='UNKNOWN_VIRUS_ERROR_CODE', index=0, number=0, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), ], containing_type=None, serialized_options=None, serialized_start=12656, serialized_end=12702, ) _sym_db.RegisterEnumDescriptor(_ERROR_VIRUSERRORCODE) _WARNING_GENEWARNINGCODE = _descriptor.EnumDescriptor( name='GeneWarningCode', full_name='ncbi.datasets.v1.Warning.GeneWarningCode', filename=None, file=DESCRIPTOR, create_key=_descriptor._internal_create_key, values=[ _descriptor.EnumValueDescriptor( name='UNKNOWN_GENE_WARNING_CODE', index=0, number=0, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='ACCESSION_VERSION_MISMATCH', index=1, number=1, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='REPLACED_GENE_ID', index=2, number=2, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='DISCONTINUED_GENE_ID', index=3, number=3, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='UNRECOGNIZED_GENE_ID', index=4, number=4, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='UNRECOGNIZED_GENE_SYMBOL', index=5, number=5, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='UNRECOGNIZED_ACCESSION', index=6, number=6, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='UNRECOGNIZED_TAX_TOKEN', index=7, number=7, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), ], containing_type=None, serialized_options=None, serialized_start=13064, serialized_end=13304, ) _sym_db.RegisterEnumDescriptor(_WARNING_GENEWARNINGCODE) _ANNOTATIONFORVIRUS_TYPE = _descriptor.EnumDescriptor( name='Type', full_name='ncbi.datasets.v1.AnnotationForVirus.Type', filename=None, file=DESCRIPTOR, create_key=_descriptor._internal_create_key, values=[ _descriptor.EnumValueDescriptor( name='DEFAULT', index=0, number=0, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='CDS_FASTA', index=1, number=1, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='PROT_FASTA', index=2, number=2, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='GENOME_GBFF', index=3, number=3, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='GENOME_GPFF', index=4, number=4, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='PDB_FILES', index=5, number=5, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='BIOSAMPLE', index=6, number=6, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), ], containing_type=None, serialized_options=None, serialized_start=14356, serialized_end=14470, ) _sym_db.RegisterEnumDescriptor(_ANNOTATIONFORVIRUS_TYPE) _VIRUSDATAREPORTREQUEST_CONTENTTYPE = _descriptor.EnumDescriptor( name='ContentType', full_name='ncbi.datasets.v1.VirusDataReportRequest.ContentType', filename=None, file=DESCRIPTOR, create_key=_descriptor._internal_create_key, values=[ _descriptor.EnumValueDescriptor( name='COMPLETE', index=0, number=0, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='ACCESSIONS_ONLY', index=1, number=1, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), ], containing_type=None, serialized_options=None, serialized_start=17453, serialized_end=17501, ) _sym_db.RegisterEnumDescriptor(_VIRUSDATAREPORTREQUEST_CONTENTTYPE) _REFGENECATALOGDATASETREQUEST_FILETYPE = _descriptor.EnumDescriptor( name='FileType', full_name='ncbi.datasets.v1.RefGeneCatalogDatasetRequest.FileType', filename=None, file=DESCRIPTOR, create_key=_descriptor._internal_create_key, values=[ _descriptor.EnumValueDescriptor( name='FILE_TYPE_UNSPECIFIED', index=0, number=0, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='FILE_TYPE_NUCLEOTIDE', index=1, number=1, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='FILE_TYPE_NUCLEOTIDE_WITH_FLANK', index=2, number=2, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='FILE_TYPE_PROTEIN', index=3, number=3, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), ], containing_type=None, serialized_options=None, serialized_start=21220, serialized_end=21343, ) _sym_db.RegisterEnumDescriptor(_REFGENECATALOGDATASETREQUEST_FILETYPE) _MICROBIGGEDATASETREQUEST_FILETYPE = _descriptor.EnumDescriptor( name='FileType', full_name='ncbi.datasets.v1.MicroBiggeDatasetRequest.FileType', filename=None, file=DESCRIPTOR, create_key=_descriptor._internal_create_key, values=[ _descriptor.EnumValueDescriptor( name='FILE_TYPE_UNSPECIFIED', index=0, number=0, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='element_fasta', index=1, number=1, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='element_flank_fasta', index=2, number=2, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='contig_fasta', index=3, number=3, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='protein_fasta', index=4, number=4, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), ], containing_type=None, serialized_options=None, serialized_start=21600, serialized_end=21718, ) _sym_db.RegisterEnumDescriptor(_MICROBIGGEDATASETREQUEST_FILETYPE) _TAXONOMYMETADATAREQUEST_CONTENTTYPE = _descriptor.EnumDescriptor( name='ContentType', full_name='ncbi.datasets.v1.TaxonomyMetadataRequest.ContentType', filename=None, file=DESCRIPTOR, create_key=_descriptor._internal_create_key, values=[ _descriptor.EnumValueDescriptor( name='COMPLETE', index=0, number=0, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='TAXIDS', index=1, number=1, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), ], containing_type=None, serialized_options=None, serialized_start=23511, serialized_end=23550, ) _sym_db.RegisterEnumDescriptor(_TAXONOMYMETADATAREQUEST_CONTENTTYPE) _TAXONOMYFILTEREDSUBTREERESPONSE_EDGE_CHILDSTATUS = _descriptor.EnumDescriptor( name='ChildStatus', full_name='ncbi.datasets.v1.TaxonomyFilteredSubtreeResponse.Edge.ChildStatus', filename=None, file=DESCRIPTOR, create_key=_descriptor._internal_create_key, values=[ _descriptor.EnumValueDescriptor( name='UNSPECIFIED', index=0, number=0, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='HAS_MORE_CHILDREN', index=1, number=1, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), _descriptor.EnumValueDescriptor( name='NO_VISIBLE_CHILDREN', index=2, number=2, serialized_options=None, type=None, create_key=_descriptor._internal_create_key), ], containing_type=None, serialized_options=None, serialized_start=24652, serialized_end=24730, ) _sym_db.RegisterEnumDescriptor(_TAXONOMYFILTEREDSUBTREERESPONSE_EDGE_CHILDSTATUS) _METHODPAYLOADREQUEST = _descriptor.Descriptor( name='MethodPayloadRequest', full_name='ncbi.datasets.v1.MethodPayloadRequest', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='method', full_name='ncbi.datasets.v1.MethodPayloadRequest.method', index=0, number=1, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='method', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='payload', full_name='ncbi.datasets.v1.MethodPayloadRequest.payload', index=1, number=2, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='payload', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=242, serialized_end=314, ) _ASSEMBLYDATASETDESCRIPTORSFILTER = _descriptor.Descriptor( name='AssemblyDatasetDescriptorsFilter', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptorsFilter', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='reference_only', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptorsFilter.reference_only', index=0, number=1, type=8, cpp_type=7, label=1, has_default_value=False, default_value=False, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031r\n\005false\0223\n\004true\022+Limit to reference & representative genomes\0224\n\005false\022+Include reference and non-reference genomes', json_name='referenceOnly', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='refseq_only', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptorsFilter.refseq_only', index=1, number=2, type=8, cpp_type=7, label=1, has_default_value=False, default_value=False, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\030\001', json_name='refseqOnly', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='assembly_source', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptorsFilter.assembly_source', index=2, number=3, type=14, cpp_type=8, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031a\n\003all\022!\n\006refseq\022\027Limit to RefSeq genomes\022#\n\007genbank\022\030Limit to GenBank genomes\022\022\n\003all\022\013All genomes', json_name='assemblySource', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='has_annotation', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptorsFilter.has_annotation', index=3, number=7, type=8, cpp_type=7, label=1, has_default_value=False, default_value=False, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031N\n\005false\022%\n\004true\022\035Limit to annotated assemblies\022\036\n\005false\022\025Return all assemblies', json_name='hasAnnotation', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='exclude_paired_reports', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptorsFilter.exclude_paired_reports', index=4, number=9, type=8, cpp_type=7, label=1, has_default_value=False, default_value=False, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031\\\n\005false\022\036\n\005false\022\025Return all assemblies\0223\n\004true\022+Only return single record for GCA/GCF pairs', json_name='excludePairedReports', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='exclude_atypical', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptorsFilter.exclude_atypical', index=5, number=11, type=8, cpp_type=7, label=1, has_default_value=False, default_value=False, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031\226\001\n\005false\022F\n\005false\022=Return all selected genomes, including ones that are atypical\022E\n\004true\022=Only return genomes that have not been classified as atypical', json_name='excludeAtypical', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='assembly_version', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptorsFilter.assembly_version', index=6, number=10, type=14, cpp_type=8, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031\200\001\n\007current\022)\n\007current\022\036Only return current assemblies\022J\n\016all_assemblies\0228Return all assemblies, including suppressed and replaced', json_name='assemblyVersion', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='assembly_level', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptorsFilter.assembly_level', index=7, number=4, type=14, cpp_type=8, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031}\022=\n\nchromosome\n\017complete_genome\022\036Chromosome and complete genome\022<\n\010scaffold\n\nchromosome\n\017complete_genome\022\023Scaffold and higher', json_name='assemblyLevel', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='first_release_date', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptorsFilter.first_release_date', index=8, number=5, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031\034\022\032\n\n01/10/2015\022\014Jan 10, 2015', json_name='firstReleaseDate', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='last_release_date', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptorsFilter.last_release_date', index=9, number=6, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031\034\022\032\n\n01/10/2021\022\014Jan 10, 2021', json_name='lastReleaseDate', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='search_text', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptorsFilter.search_text', index=10, number=8, type=9, cpp_type=9, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031d\022:\n\033Genome Reference Consortium\022\033Genome Reference Consortium\022\020\n\006GRCh38\022\006GRCh38\022\024\n\010C57BL/6J\022\010C57BL/6J', json_name='searchText', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ _ASSEMBLYDATASETDESCRIPTORSFILTER_ASSEMBLYSOURCE, _ASSEMBLYDATASETDESCRIPTORSFILTER_ASSEMBLYVERSION, _ASSEMBLYDATASETDESCRIPTORSFILTER_ASSEMBLYLEVEL, ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=317, serialized_end=2262, ) _ACCESSIONS = _descriptor.Descriptor( name='Accessions', full_name='ncbi.datasets.v1.Accessions', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='accessions', full_name='ncbi.datasets.v1.Accessions.accessions', index=0, number=1, type=9, cpp_type=9, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031R\0225\n\020GCF_000001405.40\n\020GCF_000001635.27\022\017Human and Mouse\022\031\n\020GCF_000001405.40\022\005Human', json_name='accessions', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=2265, serialized_end=2397, ) _ASSEMBLYMETADATAREQUEST_BIOPROJECTS = _descriptor.Descriptor( name='Bioprojects', full_name='ncbi.datasets.v1.AssemblyMetadataRequest.Bioprojects', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='accessions', full_name='ncbi.datasets.v1.AssemblyMetadataRequest.Bioprojects.accessions', index=0, number=1, type=9, cpp_type=9, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031O\022)\n\013PRJNA489243\022\032Vertebrate Genomes Project\022\"\n\nPRJNA31257\022\024Human Genome Project', json_name='accessions', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=3025, serialized_end=3155, ) _ASSEMBLYMETADATAREQUEST = _descriptor.Descriptor( name='AssemblyMetadataRequest', full_name='ncbi.datasets.v1.AssemblyMetadataRequest', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='taxon', full_name='ncbi.datasets.v1.AssemblyMetadataRequest.taxon', index=0, number=1, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031Y\022 \n\0049606\022\030NCBI Taxonomy Identifier\022\024\n\005human\022\013Common Name\022\037\n\014Homo sapiens\022\017Scientific Name', json_name='taxon', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='accessions', full_name='ncbi.datasets.v1.AssemblyMetadataRequest.accessions', index=1, number=2, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='accessions', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='bioprojects', full_name='ncbi.datasets.v1.AssemblyMetadataRequest.bioprojects', index=2, number=7, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='bioprojects', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='filters', full_name='ncbi.datasets.v1.AssemblyMetadataRequest.filters', index=3, number=4, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='filters', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='tax_exact_match', full_name='ncbi.datasets.v1.AssemblyMetadataRequest.tax_exact_match', index=4, number=5, type=8, cpp_type=7, label=1, has_default_value=False, default_value=False, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031\007\n\005false', json_name='taxExactMatch', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='returned_content', full_name='ncbi.datasets.v1.AssemblyMetadataRequest.returned_content', index=5, number=6, type=14, cpp_type=8, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='returnedContent', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='limit', full_name='ncbi.datasets.v1.AssemblyMetadataRequest.limit', index=6, number=3, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\030\001', json_name='limit', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='page_size', full_name='ncbi.datasets.v1.AssemblyMetadataRequest.page_size', index=7, number=8, type=5, cpp_type=1, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031\004\n\00220', json_name='pageSize', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='page_token', full_name='ncbi.datasets.v1.AssemblyMetadataRequest.page_token', index=8, number=9, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='pageToken', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[_ASSEMBLYMETADATAREQUEST_BIOPROJECTS, ], enum_types=[ _ASSEMBLYMETADATAREQUEST_CONTENTTYPE, ], serialized_options=b'\302\360\0310\n.accessions:\n accessions:\n - GCF_000001405.40', is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ _descriptor.OneofDescriptor( name='records', full_name='ncbi.datasets.v1.AssemblyMetadataRequest.records', index=0, containing_type=None, create_key=_descriptor._internal_create_key, fields=[]), ], serialized_start=2400, serialized_end=3263, ) _ASSEMBLYDATASETDESCRIPTORSREQUEST = _descriptor.Descriptor( name='AssemblyDatasetDescriptorsRequest', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptorsRequest', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='tax_id', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptorsRequest.tax_id', index=0, number=1, type=13, cpp_type=3, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='taxId', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='org_name', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptorsRequest.org_name', index=1, number=5, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\030\001', json_name='orgName', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='tax_name', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptorsRequest.tax_name', index=2, number=7, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='taxName', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='assembly_accession', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptorsRequest.assembly_accession', index=3, number=4, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='assemblyAccession', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='cutoff', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptorsRequest.cutoff', index=4, number=2, type=13, cpp_type=3, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\030\001', json_name='cutoff', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='limit', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptorsRequest.limit', index=5, number=8, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='limit', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='filters', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptorsRequest.filters', index=6, number=3, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='filters', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='tax_exact_match', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptorsRequest.tax_exact_match', index=7, number=6, type=8, cpp_type=7, label=1, has_default_value=False, default_value=False, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='taxExactMatch', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='returned_content', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptorsRequest.returned_content', index=8, number=9, type=14, cpp_type=8, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='returnedContent', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ _ASSEMBLYDATASETDESCRIPTORSREQUEST_CONTENTTYPE, ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ _descriptor.OneofDescriptor( name='id', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptorsRequest.id', index=0, containing_type=None, create_key=_descriptor._internal_create_key, fields=[]), _descriptor.OneofDescriptor( name='records', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptorsRequest.records', index=1, containing_type=None, create_key=_descriptor._internal_create_key, fields=[]), ], serialized_start=3266, serialized_end=3789, ) _ASSEMBLYDATASETDESCRIPTORS = _descriptor.Descriptor( name='AssemblyDatasetDescriptors', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptors', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='datasets', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptors.datasets', index=0, number=1, type=11, cpp_type=10, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='datasets', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='total_count', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptors.total_count', index=1, number=2, type=13, cpp_type=3, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='totalCount', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=3792, serialized_end=3926, ) _BIOPROJECT = _descriptor.Descriptor( name='BioProject', full_name='ncbi.datasets.v1.BioProject', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='accession', full_name='ncbi.datasets.v1.BioProject.accession', index=0, number=1, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='accession', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='title', full_name='ncbi.datasets.v1.BioProject.title', index=1, number=2, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='title', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='parent_accession', full_name='ncbi.datasets.v1.BioProject.parent_accession', index=2, number=3, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='parentAccession', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='parent_accessions', full_name='ncbi.datasets.v1.BioProject.parent_accessions', index=3, number=4, type=9, cpp_type=9, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='parentAccessions', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=3929, serialized_end=4081, ) _BIOPROJECTLINEAGE = _descriptor.Descriptor( name='BioProjectLineage', full_name='ncbi.datasets.v1.BioProjectLineage', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='bioprojects', full_name='ncbi.datasets.v1.BioProjectLineage.bioprojects', index=0, number=1, type=11, cpp_type=10, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='bioprojects', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=4083, serialized_end=4166, ) _ASSEMBLYDATASETDESCRIPTOR_CHROMOSOME = _descriptor.Descriptor( name='Chromosome', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptor.Chromosome', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='name', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptor.Chromosome.name', index=0, number=1, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='name', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='length', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptor.Chromosome.length', index=1, number=2, type=4, cpp_type=4, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='length', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='accession_version', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptor.Chromosome.accession_version', index=2, number=3, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='accessionVersion', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='gc_count', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptor.Chromosome.gc_count', index=3, number=4, type=4, cpp_type=4, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='gcCount', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=5091, serialized_end=5219, ) _ASSEMBLYDATASETDESCRIPTOR = _descriptor.Descriptor( name='AssemblyDatasetDescriptor', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptor', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='assembly_accession', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptor.assembly_accession', index=0, number=1, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='assemblyAccession', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='paired_assembly_accession', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptor.paired_assembly_accession', index=1, number=17, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='pairedAssemblyAccession', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='bioproject_lineages', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptor.bioproject_lineages', index=2, number=14, type=11, cpp_type=10, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='bioprojectLineages', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='display_name', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptor.display_name', index=3, number=2, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='displayName', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='org', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptor.org', index=4, number=10, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='org', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='chromosomes', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptor.chromosomes', index=5, number=4, type=11, cpp_type=10, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='chromosomes', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='assembly_category', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptor.assembly_category', index=6, number=5, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='assemblyCategory', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='annotation_metadata', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptor.annotation_metadata', index=7, number=11, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='annotationMetadata', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='assembly_level', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptor.assembly_level', index=8, number=7, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='assemblyLevel', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='submitter', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptor.submitter', index=9, number=15, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='submitter', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='submission_date', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptor.submission_date', index=10, number=8, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='submissionDate', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='contig_n50', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptor.contig_n50', index=11, number=9, type=13, cpp_type=3, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='contigN50', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='estimated_size', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptor.estimated_size', index=12, number=12, type=4, cpp_type=4, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='estimatedSize', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='seq_length', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptor.seq_length', index=13, number=13, type=4, cpp_type=4, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='seqLength', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='biosample_accession', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptor.biosample_accession', index=14, number=16, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='biosampleAccession', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='biosample', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptor.biosample', index=15, number=20, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='biosample', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='blast_url', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptor.blast_url', index=16, number=18, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='blastUrl', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='gc_count', full_name='ncbi.datasets.v1.AssemblyDatasetDescriptor.gc_count', index=17, number=19, type=4, cpp_type=4, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='gcCount', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[_ASSEMBLYDATASETDESCRIPTOR_CHROMOSOME, ], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=4169, serialized_end=5219, ) _BUSCOSTAT = _descriptor.Descriptor( name='BuscoStat', full_name='ncbi.datasets.v1.BuscoStat', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='busco_lineage', full_name='ncbi.datasets.v1.BuscoStat.busco_lineage', index=0, number=1, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='buscoLineage', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='busco_ver', full_name='ncbi.datasets.v1.BuscoStat.busco_ver', index=1, number=2, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='buscoVer', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='complete', full_name='ncbi.datasets.v1.BuscoStat.complete', index=2, number=3, type=2, cpp_type=6, label=1, has_default_value=False, default_value=float(0), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='complete', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='single_copy', full_name='ncbi.datasets.v1.BuscoStat.single_copy', index=3, number=4, type=2, cpp_type=6, label=1, has_default_value=False, default_value=float(0), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='singleCopy', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='duplicated', full_name='ncbi.datasets.v1.BuscoStat.duplicated', index=4, number=5, type=2, cpp_type=6, label=1, has_default_value=False, default_value=float(0), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='duplicated', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='fragmented', full_name='ncbi.datasets.v1.BuscoStat.fragmented', index=5, number=6, type=2, cpp_type=6, label=1, has_default_value=False, default_value=float(0), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='fragmented', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='missing', full_name='ncbi.datasets.v1.BuscoStat.missing', index=6, number=7, type=2, cpp_type=6, label=1, has_default_value=False, default_value=float(0), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='missing', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='total_count', full_name='ncbi.datasets.v1.BuscoStat.total_count', index=7, number=8, type=4, cpp_type=4, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='totalCount', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=5222, serialized_end=5483, ) _ANNOTATIONFORASSEMBLY_FILE = _descriptor.Descriptor( name='File', full_name='ncbi.datasets.v1.AnnotationForAssembly.File', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='type', full_name='ncbi.datasets.v1.AnnotationForAssembly.File.type', index=0, number=1, type=14, cpp_type=8, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='type', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='estimated_size', full_name='ncbi.datasets.v1.AnnotationForAssembly.File.estimated_size', index=1, number=2, type=4, cpp_type=4, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='estimatedSize', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=5832, serialized_end=5943, ) _ANNOTATIONFORASSEMBLY = _descriptor.Descriptor( name='AnnotationForAssembly', full_name='ncbi.datasets.v1.AnnotationForAssembly', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='name', full_name='ncbi.datasets.v1.AnnotationForAssembly.name', index=0, number=1, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='name', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='source', full_name='ncbi.datasets.v1.AnnotationForAssembly.source', index=1, number=2, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='source', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='release_number', full_name='ncbi.datasets.v1.AnnotationForAssembly.release_number', index=2, number=3, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='releaseNumber', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='release_date', full_name='ncbi.datasets.v1.AnnotationForAssembly.release_date', index=3, number=4, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='releaseDate', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='report_url', full_name='ncbi.datasets.v1.AnnotationForAssembly.report_url', index=4, number=5, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='reportUrl', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='file', full_name='ncbi.datasets.v1.AnnotationForAssembly.file', index=5, number=6, type=11, cpp_type=10, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='file', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='stats', full_name='ncbi.datasets.v1.AnnotationForAssembly.stats', index=6, number=7, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='stats', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='busco', full_name='ncbi.datasets.v1.AnnotationForAssembly.busco', index=7, number=8, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='busco', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[_ANNOTATIONFORASSEMBLY_FILE, ], enum_types=[ _ANNOTATIONFORASSEMBLY_TYPE, ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=5486, serialized_end=6117, ) _FEATURECOUNTS = _descriptor.Descriptor( name='FeatureCounts', full_name='ncbi.datasets.v1.FeatureCounts', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='gene_counts', full_name='ncbi.datasets.v1.FeatureCounts.gene_counts', index=0, number=1, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='geneCounts', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=6119, serialized_end=6197, ) _GENECOUNTS = _descriptor.Descriptor( name='GeneCounts', full_name='ncbi.datasets.v1.GeneCounts', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='total', full_name='ncbi.datasets.v1.GeneCounts.total', index=0, number=1, type=13, cpp_type=3, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='total', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='protein_coding', full_name='ncbi.datasets.v1.GeneCounts.protein_coding', index=1, number=2, type=13, cpp_type=3, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='proteinCoding', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=6199, serialized_end=6272, ) _ASSEMBLYDATASETREQUEST = _descriptor.Descriptor( name='AssemblyDatasetRequest', full_name='ncbi.datasets.v1.AssemblyDatasetRequest', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='assembly_accessions', full_name='ncbi.datasets.v1.AssemblyDatasetRequest.assembly_accessions', index=0, number=1, type=9, cpp_type=9, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\030\001', json_name='assemblyAccessions', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='accessions', full_name='ncbi.datasets.v1.AssemblyDatasetRequest.accessions', index=1, number=10, type=9, cpp_type=9, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031R\0225\n\020GCF_000001405.40\n\020GCF_000001635.27\022\017Human and Mouse\022\031\n\020GCF_000001405.40\022\005Human', json_name='accessions', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='chromosomes', full_name='ncbi.datasets.v1.AssemblyDatasetRequest.chromosomes', index=2, number=2, type=9, cpp_type=9, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031M\022,\n\0011\n\0012\n\0013\n\001X\n\001Y\n\002MT\022\027Selected chromosomes #1\022\035\n\001X\n\001Y\022\025Human sex chromosomes', json_name='chromosomes', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='include_annotation', full_name='ncbi.datasets.v1.AssemblyDatasetRequest.include_annotation', index=3, number=3, type=8, cpp_type=7, label=1, has_default_value=False, default_value=False, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\030\001\332\360\031\002\010\002', json_name='includeAnnotation', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='exclude_sequence', full_name='ncbi.datasets.v1.AssemblyDatasetRequest.exclude_sequence', index=4, number=7, type=8, cpp_type=7, label=1, has_default_value=False, default_value=False, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\332\360\031\002\010\002\302\360\031L\n\005false\022 \n\004true\022\030Exclude genomic sequence\022!\n\005false\022\030Include genomic sequence', json_name='excludeSequence', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='include_annotation_type', full_name='ncbi.datasets.v1.AssemblyDatasetRequest.include_annotation_type', index=5, number=8, type=14, cpp_type=8, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\332\360\031\002\010\002\302\360\031\206\001\0226\n\nPROT_FASTA\n\tRNA_FASTA\022\035Transcript & Protein Sequence\022L\n\nGENOME_GFF\n\013GENOME_GBFF\n\nGENOME_GTF\n\nPROT_FASTA\n\tRNA_FASTA\n\tCDS_FASTA\022\003All', json_name='includeAnnotationType', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='hydrated', full_name='ncbi.datasets.v1.AssemblyDatasetRequest.hydrated', index=6, number=9, type=14, cpp_type=8, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='hydrated', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='include_tsv', full_name='ncbi.datasets.v1.AssemblyDatasetRequest.include_tsv', index=7, number=11, type=8, cpp_type=7, label=1, has_default_value=False, default_value=False, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\332\360\031\002\010\002\302\360\031\007\n\005false', json_name='includeTsv', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ _ASSEMBLYDATASETREQUEST_RESOLUTION, ], serialized_options=b'\302\360\031 \n\036accessions:\n- GCF_000001405.40', is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=6275, serialized_end=7256, ) _ASSEMBLYDATASETAVAILABILITY = _descriptor.Descriptor( name='AssemblyDatasetAvailability', full_name='ncbi.datasets.v1.AssemblyDatasetAvailability', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='valid_assemblies', full_name='ncbi.datasets.v1.AssemblyDatasetAvailability.valid_assemblies', index=0, number=1, type=9, cpp_type=9, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='validAssemblies', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='invalid_assemblies', full_name='ncbi.datasets.v1.AssemblyDatasetAvailability.invalid_assemblies', index=1, number=2, type=9, cpp_type=9, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='invalidAssemblies', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='reason', full_name='ncbi.datasets.v1.AssemblyDatasetAvailability.reason', index=2, number=3, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='reason', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=7259, serialized_end=7402, ) _TAXIDREQUEST = _descriptor.Descriptor( name='TaxidRequest', full_name='ncbi.datasets.v1.TaxidRequest', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='org_name', full_name='ncbi.datasets.v1.TaxidRequest.org_name', index=0, number=1, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='orgName', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=7404, serialized_end=7445, ) _TAXIDREPLY = _descriptor.Descriptor( name='TaxidReply', full_name='ncbi.datasets.v1.TaxidReply', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='tax_id', full_name='ncbi.datasets.v1.TaxidReply.tax_id', index=0, number=1, type=13, cpp_type=3, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='taxId', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=7447, serialized_end=7482, ) _ORGANISM_COUNTS = _descriptor.Descriptor( name='Counts', full_name='ncbi.datasets.v1.Organism.Counts', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='node', full_name='ncbi.datasets.v1.Organism.Counts.node', index=0, number=1, type=13, cpp_type=3, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='node', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='subtree', full_name='ncbi.datasets.v1.Organism.Counts.subtree', index=1, number=2, type=13, cpp_type=3, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='subtree', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=8344, serialized_end=8398, ) _ORGANISM_COUNTBYTYPE = _descriptor.Descriptor( name='CountByType', full_name='ncbi.datasets.v1.Organism.CountByType', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='type', full_name='ncbi.datasets.v1.Organism.CountByType.type', index=0, number=1, type=14, cpp_type=8, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='type', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='counts', full_name='ncbi.datasets.v1.Organism.CountByType.counts', index=1, number=2, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='counts', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=8400, serialized_end=8521, ) _ORGANISM = _descriptor.Descriptor( name='Organism', full_name='ncbi.datasets.v1.Organism', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='tax_id', full_name='ncbi.datasets.v1.Organism.tax_id', index=0, number=1, type=4, cpp_type=4, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='taxId', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='sci_name', full_name='ncbi.datasets.v1.Organism.sci_name', index=1, number=2, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='sciName', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='common_name', full_name='ncbi.datasets.v1.Organism.common_name', index=2, number=3, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='commonName', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='blast_node', full_name='ncbi.datasets.v1.Organism.blast_node', index=3, number=16, type=8, cpp_type=7, label=1, has_default_value=False, default_value=False, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='blastNode', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='breed', full_name='ncbi.datasets.v1.Organism.breed', index=4, number=10, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='breed', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='cultivar', full_name='ncbi.datasets.v1.Organism.cultivar', index=5, number=11, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='cultivar', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='ecotype', full_name='ncbi.datasets.v1.Organism.ecotype', index=6, number=12, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='ecotype', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='isolate', full_name='ncbi.datasets.v1.Organism.isolate', index=7, number=13, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='isolate', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='sex', full_name='ncbi.datasets.v1.Organism.sex', index=8, number=14, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='sex', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='strain', full_name='ncbi.datasets.v1.Organism.strain', index=9, number=15, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='strain', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='search_text', full_name='ncbi.datasets.v1.Organism.search_text', index=10, number=17, type=9, cpp_type=9, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='searchText', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='rank', full_name='ncbi.datasets.v1.Organism.rank', index=11, number=5, type=14, cpp_type=8, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='rank', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='parent_tax_id', full_name='ncbi.datasets.v1.Organism.parent_tax_id', index=12, number=6, type=4, cpp_type=4, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='parentTaxId', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='assembly_count', full_name='ncbi.datasets.v1.Organism.assembly_count', index=13, number=7, type=4, cpp_type=4, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\030\001', json_name='assemblyCount', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='assembly_counts', full_name='ncbi.datasets.v1.Organism.assembly_counts', index=14, number=19, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='assemblyCounts', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='counts', full_name='ncbi.datasets.v1.Organism.counts', index=15, number=22, type=11, cpp_type=10, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='counts', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='children', full_name='ncbi.datasets.v1.Organism.children', index=16, number=8, type=11, cpp_type=10, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='children', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='merged', full_name='ncbi.datasets.v1.Organism.merged', index=17, number=9, type=11, cpp_type=10, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='merged', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='merged_tax_ids', full_name='ncbi.datasets.v1.Organism.merged_tax_ids', index=18, number=18, type=4, cpp_type=4, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='mergedTaxIds', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='min_ord', full_name='ncbi.datasets.v1.Organism.min_ord', index=19, number=20, type=13, cpp_type=3, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='minOrd', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='max_ord', full_name='ncbi.datasets.v1.Organism.max_ord', index=20, number=21, type=13, cpp_type=3, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='maxOrd', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='weight', full_name='ncbi.datasets.v1.Organism.weight', index=21, number=23, type=13, cpp_type=3, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='weight', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='key', full_name='ncbi.datasets.v1.Organism.key', index=22, number=100, type=4, cpp_type=4, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='key', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='title', full_name='ncbi.datasets.v1.Organism.title', index=23, number=101, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='title', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='icon', full_name='ncbi.datasets.v1.Organism.icon', index=24, number=102, type=8, cpp_type=7, label=1, has_default_value=False, default_value=False, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='icon', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[_ORGANISM_COUNTS, _ORGANISM_COUNTBYTYPE, ], enum_types=[ _ORGANISM_RANKTYPE, ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=7485, serialized_end=9193, ) _TAXTREEREQUEST = _descriptor.Descriptor( name='TaxTreeRequest', full_name='ncbi.datasets.v1.TaxTreeRequest', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='tax_id', full_name='ncbi.datasets.v1.TaxTreeRequest.tax_id', index=0, number=1, type=4, cpp_type=4, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\030\001', json_name='taxId', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='tax_token', full_name='ncbi.datasets.v1.TaxTreeRequest.tax_token', index=1, number=2, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\030\001', json_name='taxToken', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='taxon', full_name='ncbi.datasets.v1.TaxTreeRequest.taxon', index=2, number=3, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031Y\022 \n\0049606\022\030NCBI Taxonomy Identifier\022\024\n\005human\022\013Common Name\022\037\n\014Homo sapiens\022\017Scientific Name', json_name='taxon', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='children_only', full_name='ncbi.datasets.v1.TaxTreeRequest.children_only', index=3, number=4, type=8, cpp_type=7, label=1, has_default_value=False, default_value=False, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031\007\n\005false', json_name='childrenOnly', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ _descriptor.OneofDescriptor( name='taxonomy', full_name='ncbi.datasets.v1.TaxTreeRequest.taxonomy', index=0, containing_type=None, create_key=_descriptor._internal_create_key, fields=[]), ], serialized_start=9196, serialized_end=9457, ) _ORGANISMQUERYREQUEST = _descriptor.Descriptor( name='OrganismQueryRequest', full_name='ncbi.datasets.v1.OrganismQueryRequest', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='organism_query', full_name='ncbi.datasets.v1.OrganismQueryRequest.organism_query', index=0, number=1, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\030\001', json_name='organismQuery', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='taxon_query', full_name='ncbi.datasets.v1.OrganismQueryRequest.taxon_query', index=1, number=2, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031\014\022\n\n\003hum\022\003hum', json_name='taxonQuery', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='tax_rank_filter', full_name='ncbi.datasets.v1.OrganismQueryRequest.tax_rank_filter', index=2, number=3, type=14, cpp_type=8, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031\t\n\007species', json_name='taxRankFilter', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='tax_resource_filter', full_name='ncbi.datasets.v1.OrganismQueryRequest.tax_resource_filter', index=3, number=4, type=14, cpp_type=8, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031\005\n\003all', json_name='taxResourceFilter', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ _ORGANISMQUERYREQUEST_TAXRANKFILTER, _ORGANISMQUERYREQUEST_TAXONRESOURCEFILTER, ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ _descriptor.OneofDescriptor( name='id', full_name='ncbi.datasets.v1.OrganismQueryRequest.id', index=0, containing_type=None, create_key=_descriptor._internal_create_key, fields=[]), ], serialized_start=9460, serialized_end=9916, ) _SCINAMEANDIDS_SCINAMEANDID = _descriptor.Descriptor( name='SciNameAndId', full_name='ncbi.datasets.v1.SciNameAndIds.SciNameAndId', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='sci_name', full_name='ncbi.datasets.v1.SciNameAndIds.SciNameAndId.sci_name', index=0, number=1, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='sciName', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='tax_id', full_name='ncbi.datasets.v1.SciNameAndIds.SciNameAndId.tax_id', index=1, number=2, type=4, cpp_type=4, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='taxId', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='common_name', full_name='ncbi.datasets.v1.SciNameAndIds.SciNameAndId.common_name', index=2, number=3, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='commonName', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='matched_term', full_name='ncbi.datasets.v1.SciNameAndIds.SciNameAndId.matched_term', index=3, number=4, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='matchedTerm', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=10024, serialized_end=10156, ) _SCINAMEANDIDS = _descriptor.Descriptor( name='SciNameAndIds', full_name='ncbi.datasets.v1.SciNameAndIds', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='sci_name_and_ids', full_name='ncbi.datasets.v1.SciNameAndIds.sci_name_and_ids', index=0, number=1, type=11, cpp_type=10, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='sciNameAndIds', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[_SCINAMEANDIDS_SCINAMEANDID, ], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=9919, serialized_end=10156, ) _ORTHOLOGREQUEST = _descriptor.Descriptor( name='OrthologRequest', full_name='ncbi.datasets.v1.OrthologRequest', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='gene_id', full_name='ncbi.datasets.v1.OrthologRequest.gene_id', index=0, number=1, type=13, cpp_type=3, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031\030\022\014\n\0042778\022\004GNAS\022\010\n\0012\022\003A2M', json_name='geneId', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='returned_content', full_name='ncbi.datasets.v1.OrthologRequest.returned_content', index=1, number=2, type=14, cpp_type=8, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='returnedContent', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='taxon_filter', full_name='ncbi.datasets.v1.OrthologRequest.taxon_filter', index=2, number=3, type=9, cpp_type=9, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031{\022\'\n\0049606\n\00510090\022\030NCBI Taxonomy Identifier\022!\n\005human\n\013house mouse\022\013Common Name\022-\n\014homo sapiens\n\014mus musculus\022\017Scientific Name', json_name='taxonFilter', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ _ORTHOLOGREQUEST_CONTENTTYPE, ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=10159, serialized_end=10529, ) _ORTHOLOGSET = _descriptor.Descriptor( name='OrthologSet', full_name='ncbi.datasets.v1.OrthologSet', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='ortholog_set_id', full_name='ncbi.datasets.v1.OrthologSet.ortholog_set_id', index=0, number=1, type=13, cpp_type=3, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='orthologSetId', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='method', full_name='ncbi.datasets.v1.OrthologSet.method', index=1, number=2, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='method', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='genes', full_name='ncbi.datasets.v1.OrthologSet.genes', index=2, number=3, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='genes', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=10532, serialized_end=10663, ) _GENEDATASETREQUEST_SYMBOLSFORTAXON = _descriptor.Descriptor( name='SymbolsForTaxon', full_name='ncbi.datasets.v1.GeneDatasetRequest.SymbolsForTaxon', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='symbols', full_name='ncbi.datasets.v1.GeneDatasetRequest.SymbolsForTaxon.symbols', index=0, number=1, type=9, cpp_type=9, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031\016\022\014\n\004GNAS\022\004GNAS', json_name='symbols', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='taxon', full_name='ncbi.datasets.v1.GeneDatasetRequest.SymbolsForTaxon.taxon', index=1, number=2, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031Y\022 \n\0049606\022\030NCBI Taxonomy Identifier\022\024\n\005human\022\013Common Name\022\037\n\014Homo sapiens\022\017Scientific Name', json_name='taxon', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=11444, serialized_end=11624, ) _GENEDATASETREQUEST_GENEIDS = _descriptor.Descriptor( name='GeneIds', full_name='ncbi.datasets.v1.GeneDatasetRequest.GeneIds', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='gene_ids', full_name='ncbi.datasets.v1.GeneDatasetRequest.GeneIds.gene_ids', index=0, number=1, type=13, cpp_type=3, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='geneIds', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=11626, serialized_end=11662, ) _GENEDATASETREQUEST_SORT = _descriptor.Descriptor( name='Sort', full_name='ncbi.datasets.v1.GeneDatasetRequest.Sort', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='field', full_name='ncbi.datasets.v1.GeneDatasetRequest.Sort.field', index=0, number=1, type=14, cpp_type=8, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='field', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='direction', full_name='ncbi.datasets.v1.GeneDatasetRequest.Sort.direction', index=1, number=2, type=14, cpp_type=8, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='direction', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=11665, serialized_end=11804, ) _GENEDATASETREQUEST = _descriptor.Descriptor( name='GeneDatasetRequest', full_name='ncbi.datasets.v1.GeneDatasetRequest', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='gene_ids', full_name='ncbi.datasets.v1.GeneDatasetRequest.gene_ids', index=0, number=1, type=13, cpp_type=3, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031<\022\024\n\00559067\022\013IL21 GeneID\022$\n\00559067\n\00550615\022\024IL21 & IL21R GeneIDs', json_name='geneIds', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='accessions', full_name='ncbi.datasets.v1.GeneDatasetRequest.accessions', index=1, number=10, type=9, cpp_type=9, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031]\022.\n\013NM_021803.4\n\013NM_181078.3\022\022RefSeq transcripts\022+\n\013NP_068575.1\n\013NP_851564.1\022\017RefSeq proteins', json_name='accessions', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='symbols_for_taxon', full_name='ncbi.datasets.v1.GeneDatasetRequest.symbols_for_taxon', index=2, number=9, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='symbolsForTaxon', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='taxon', full_name='ncbi.datasets.v1.GeneDatasetRequest.taxon', index=3, number=3, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031Y\022 \n\0049606\022\030NCBI Taxonomy Identifier\022\024\n\005human\022\013Common Name\022\037\n\014Homo sapiens\022\017Scientific Name', json_name='taxon', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='include_annotation_type', full_name='ncbi.datasets.v1.GeneDatasetRequest.include_annotation_type', index=4, number=6, type=14, cpp_type=8, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\332\360\031\002\010\002', json_name='includeAnnotationType', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='returned_content', full_name='ncbi.datasets.v1.GeneDatasetRequest.returned_content', index=5, number=7, type=14, cpp_type=8, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='returnedContent', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='sort_schema', full_name='ncbi.datasets.v1.GeneDatasetRequest.sort_schema', index=6, number=8, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='sortSchema', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='limit', full_name='ncbi.datasets.v1.GeneDatasetRequest.limit', index=7, number=11, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='limit', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='fasta_filter', full_name='ncbi.datasets.v1.GeneDatasetRequest.fasta_filter', index=8, number=12, type=9, cpp_type=9, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='fastaFilter', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[_GENEDATASETREQUEST_SYMBOLSFORTAXON, _GENEDATASETREQUEST_GENEIDS, _GENEDATASETREQUEST_SORT, ], enum_types=[ _GENEDATASETREQUEST_CONTENTTYPE, _GENEDATASETREQUEST_SORTFIELD, ], serialized_options=b'\302\360\031\033\n\031gene_ids:\n- 59067\n- 50615', is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=10666, serialized_end=11999, ) _ERROR = _descriptor.Descriptor( name='Error', full_name='ncbi.datasets.v1.Error', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='assembly_error_code', full_name='ncbi.datasets.v1.Error.assembly_error_code', index=0, number=6, type=14, cpp_type=8, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='assemblyErrorCode', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='gene_error_code', full_name='ncbi.datasets.v1.Error.gene_error_code', index=1, number=7, type=14, cpp_type=8, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='geneErrorCode', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='virus_error_code', full_name='ncbi.datasets.v1.Error.virus_error_code', index=2, number=8, type=14, cpp_type=8, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='virusErrorCode', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='reason', full_name='ncbi.datasets.v1.Error.reason', index=3, number=5, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='reason', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='message', full_name='ncbi.datasets.v1.Error.message', index=4, number=2, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='message', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='valid_identifiers', full_name='ncbi.datasets.v1.Error.valid_identifiers', index=5, number=3, type=9, cpp_type=9, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\030\001', json_name='validIdentifiers', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='invalid_identifiers', full_name='ncbi.datasets.v1.Error.invalid_identifiers', index=6, number=4, type=9, cpp_type=9, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='invalidIdentifiers', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ _ERROR_ASSEMBLYERRORCODE, _ERROR_GENEERRORCODE, _ERROR_VIRUSERRORCODE, ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ _descriptor.OneofDescriptor( name='code', full_name='ncbi.datasets.v1.Error.code', index=0, containing_type=None, create_key=_descriptor._internal_create_key, fields=[]), ], serialized_start=12002, serialized_end=12710, ) _WARNING_REPLACEDID = _descriptor.Descriptor( name='ReplacedId', full_name='ncbi.datasets.v1.Warning.ReplacedId', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='requested', full_name='ncbi.datasets.v1.Warning.ReplacedId.requested', index=0, number=1, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='requested', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='returned', full_name='ncbi.datasets.v1.Warning.ReplacedId.returned', index=1, number=2, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='returned', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=12991, serialized_end=13061, ) _WARNING = _descriptor.Descriptor( name='Warning', full_name='ncbi.datasets.v1.Warning', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='gene_warning_code', full_name='ncbi.datasets.v1.Warning.gene_warning_code', index=0, number=7, type=14, cpp_type=8, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='geneWarningCode', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='reason', full_name='ncbi.datasets.v1.Warning.reason', index=1, number=2, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='reason', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='message', full_name='ncbi.datasets.v1.Warning.message', index=2, number=3, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='message', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='replaced_id', full_name='ncbi.datasets.v1.Warning.replaced_id', index=3, number=4, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='replacedId', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='unrecognized_identifier', full_name='ncbi.datasets.v1.Warning.unrecognized_identifier', index=4, number=5, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='unrecognizedIdentifier', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[_WARNING_REPLACEDID, ], enum_types=[ _WARNING_GENEWARNINGCODE, ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ _descriptor.OneofDescriptor( name='code', full_name='ncbi.datasets.v1.Warning.code', index=0, containing_type=None, create_key=_descriptor._internal_create_key, fields=[]), ], serialized_start=12713, serialized_end=13312, ) _MESSAGE = _descriptor.Descriptor( name='Message', full_name='ncbi.datasets.v1.Message', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='error', full_name='ncbi.datasets.v1.Message.error', index=0, number=1, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='error', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='warning', full_name='ncbi.datasets.v1.Message.warning', index=1, number=2, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='warning', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ _descriptor.OneofDescriptor( name='message', full_name='ncbi.datasets.v1.Message.message', index=0, containing_type=None, create_key=_descriptor._internal_create_key, fields=[]), ], serialized_start=13314, serialized_end=13438, ) _GENEMATCH = _descriptor.Descriptor( name='GeneMatch', full_name='ncbi.datasets.v1.GeneMatch', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='messages', full_name='ncbi.datasets.v1.GeneMatch.messages', index=0, number=1, type=11, cpp_type=10, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\030\001', json_name='messages', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='warnings', full_name='ncbi.datasets.v1.GeneMatch.warnings', index=1, number=3, type=11, cpp_type=10, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='warnings', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='query', full_name='ncbi.datasets.v1.GeneMatch.query', index=2, number=4, type=9, cpp_type=9, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='query', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='gene', full_name='ncbi.datasets.v1.GeneMatch.gene', index=3, number=2, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='gene', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='errors', full_name='ncbi.datasets.v1.GeneMatch.errors', index=4, number=5, type=11, cpp_type=10, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='errors', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=13441, serialized_end=13691, ) _GENEMETADATA = _descriptor.Descriptor( name='GeneMetadata', full_name='ncbi.datasets.v1.GeneMetadata', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='messages', full_name='ncbi.datasets.v1.GeneMetadata.messages', index=0, number=1, type=11, cpp_type=10, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='messages', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='genes', full_name='ncbi.datasets.v1.GeneMetadata.genes', index=1, number=2, type=11, cpp_type=10, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='genes', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='total_count', full_name='ncbi.datasets.v1.GeneMetadata.total_count', index=2, number=3, type=13, cpp_type=3, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='totalCount', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=13694, serialized_end=13847, ) _ASSEMBLYMATCH = _descriptor.Descriptor( name='AssemblyMatch', full_name='ncbi.datasets.v1.AssemblyMatch', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='messages', full_name='ncbi.datasets.v1.AssemblyMatch.messages', index=0, number=1, type=11, cpp_type=10, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='messages', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='assembly', full_name='ncbi.datasets.v1.AssemblyMatch.assembly', index=1, number=2, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='assembly', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=13850, serialized_end=13993, ) _ASSEMBLYMETADATA = _descriptor.Descriptor( name='AssemblyMetadata', full_name='ncbi.datasets.v1.AssemblyMetadata', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='messages', full_name='ncbi.datasets.v1.AssemblyMetadata.messages', index=0, number=1, type=11, cpp_type=10, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='messages', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='assemblies', full_name='ncbi.datasets.v1.AssemblyMetadata.assemblies', index=1, number=2, type=11, cpp_type=10, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='assemblies', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='total_count', full_name='ncbi.datasets.v1.AssemblyMetadata.total_count', index=2, number=3, type=13, cpp_type=3, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='totalCount', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='next_page_token', full_name='ncbi.datasets.v1.AssemblyMetadata.next_page_token', index=3, number=4, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='nextPageToken', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=13996, serialized_end=14207, ) _GENEDESCRIPTORS = _descriptor.Descriptor( name='GeneDescriptors', full_name='ncbi.datasets.v1.GeneDescriptors', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='genes', full_name='ncbi.datasets.v1.GeneDescriptors.genes', index=0, number=1, type=11, cpp_type=10, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='genes', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='errors', full_name='ncbi.datasets.v1.GeneDescriptors.errors', index=1, number=2, type=11, cpp_type=10, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='errors', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=14209, serialized_end=14331, ) _ANNOTATIONFORVIRUS = _descriptor.Descriptor( name='AnnotationForVirus', full_name='ncbi.datasets.v1.AnnotationForVirus', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ ], extensions=[ ], nested_types=[], enum_types=[ _ANNOTATIONFORVIRUS_TYPE, ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=14334, serialized_end=14470, ) _VIRUSDATASETREQUEST = _descriptor.Descriptor( name='VirusDatasetRequest', full_name='ncbi.datasets.v1.VirusDatasetRequest', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='tax_id', full_name='ncbi.datasets.v1.VirusDatasetRequest.tax_id', index=0, number=1, type=13, cpp_type=3, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\030\001', json_name='taxId', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='tax_name', full_name='ncbi.datasets.v1.VirusDatasetRequest.tax_name', index=1, number=2, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\030\001', json_name='taxName', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='accession', full_name='ncbi.datasets.v1.VirusDatasetRequest.accession', index=2, number=18, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='accession', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='accessions', full_name='ncbi.datasets.v1.VirusDatasetRequest.accessions', index=3, number=16, type=9, cpp_type=9, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031?\022=\n\013NC_045512.2\022.SARS-COV-2 isolate Wuhan-Hu-1, complete genome', json_name='accessions', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='taxon', full_name='ncbi.datasets.v1.VirusDatasetRequest.taxon', index=4, number=19, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031@\022\025\n\0072697049\022\nSARS-COV-2\022\026\n\00511118\022\rCoronaviridae\022\017\n\0071335626\022\004MERS', json_name='taxon', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='refseq_only', full_name='ncbi.datasets.v1.VirusDatasetRequest.refseq_only', index=5, number=4, type=8, cpp_type=7, label=1, has_default_value=False, default_value=False, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031P\n\005false\022\037\n\004true\022\027Limit to RefSeq genomes\022&\n\005false\022\035Both GenBank & RefSeq genomes', json_name='refseqOnly', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='annotated_only', full_name='ncbi.datasets.v1.VirusDatasetRequest.annotated_only', index=6, number=5, type=8, cpp_type=7, label=1, has_default_value=False, default_value=False, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031A\n\005false\022\"\n\004true\022\032Limit to annotated genomes\022\024\n\005false\022\013All genomes', json_name='annotatedOnly', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='released_since', full_name='ncbi.datasets.v1.VirusDatasetRequest.released_since', index=7, number=6, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031\036\022\034\n\n2020-08-01\022\016August 1, 2020', json_name='releasedSince', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='updated_since', full_name='ncbi.datasets.v1.VirusDatasetRequest.updated_since', index=8, number=17, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031\035\022\033\n\n2021-07-18\022\rJuly 18, 2021', json_name='updatedSince', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='host', full_name='ncbi.datasets.v1.VirusDatasetRequest.host', index=9, number=7, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031\020\022\016\n\005human\022\005human', json_name='host', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='pangolin_classification', full_name='ncbi.datasets.v1.VirusDatasetRequest.pangolin_classification', index=10, number=20, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='pangolinClassification', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='geo_location', full_name='ncbi.datasets.v1.VirusDatasetRequest.geo_location', index=11, number=8, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031\031\022\n\n\003USA\022\003USA\022\013\n\002TX\022\005Texas', json_name='geoLocation', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='complete_only', full_name='ncbi.datasets.v1.VirusDatasetRequest.complete_only', index=12, number=9, type=8, cpp_type=7, label=1, has_default_value=False, default_value=False, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031@\n\005false\022!\n\004true\022\031Limit to complete genomes\022\024\n\005false\022\013All genomes', json_name='completeOnly', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='table_fields', full_name='ncbi.datasets.v1.VirusDatasetRequest.table_fields', index=13, number=10, type=14, cpp_type=8, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031N\022L\n\024nucleotide_accession\n\021nucleotide_length\n\020nuc_completeness\022\017Assembly Fields', json_name='tableFields', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='exclude_sequence', full_name='ncbi.datasets.v1.VirusDatasetRequest.exclude_sequence', index=14, number=12, type=8, cpp_type=7, label=1, has_default_value=False, default_value=False, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\332\360\031\002\010\002\302\360\031L\n\005false\022 \n\004true\022\030Exclude genomic sequence\022!\n\005false\022\030Include genomic sequence', json_name='excludeSequence', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='include_annotation_type', full_name='ncbi.datasets.v1.VirusDatasetRequest.include_annotation_type', index=15, number=13, type=14, cpp_type=8, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\332\360\031\002\010\002\302\360\031K\022 \n\tCDS_FASTA\022\023Transcript sequence\022\'\n\tCDS_FASTA\n\nPROT_FASTA\022\016All annotation', json_name='includeAnnotationType', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='format', full_name='ncbi.datasets.v1.VirusDatasetRequest.format', index=16, number=14, type=14, cpp_type=8, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\0312\n\003tsv\022\n\n\003tsv\022\003TSV\022\n\n\003csv\022\003CSV\022\023\n\005jsonl\022\nJSON Lines', json_name='format', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=14473, serialized_end=16064, ) _VIRUSDATASETFILTER = _descriptor.Descriptor( name='VirusDatasetFilter', full_name='ncbi.datasets.v1.VirusDatasetFilter', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='accessions', full_name='ncbi.datasets.v1.VirusDatasetFilter.accessions', index=0, number=2, type=9, cpp_type=9, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031\206\001\022\203\001\n\027NC_045512.2,NC_038294.1\022hSARS-COV-2 isolate Wuhan-Hu-1 and Middle East respiratory syndrome-related coronavirus, complete genomes', json_name='accessions', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='taxon', full_name='ncbi.datasets.v1.VirusDatasetFilter.taxon', index=1, number=3, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031@\022\025\n\0072697049\022\nSARS-COV-2\022\026\n\00511118\022\rCoronaviridae\022\017\n\0071335626\022\004MERS', json_name='taxon', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='refseq_only', full_name='ncbi.datasets.v1.VirusDatasetFilter.refseq_only', index=2, number=4, type=8, cpp_type=7, label=1, has_default_value=False, default_value=False, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031P\n\005false\022\037\n\004true\022\027Limit to RefSeq genomes\022&\n\005false\022\035Both GenBank & RefSeq genomes', json_name='refseqOnly', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='annotated_only', full_name='ncbi.datasets.v1.VirusDatasetFilter.annotated_only', index=3, number=5, type=8, cpp_type=7, label=1, has_default_value=False, default_value=False, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031A\n\005false\022\"\n\004true\022\032Limit to annotated genomes\022\024\n\005false\022\013All genomes', json_name='annotatedOnly', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='released_since', full_name='ncbi.datasets.v1.VirusDatasetFilter.released_since', index=4, number=6, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031\036\022\034\n\n2020-08-01\022\016August 1, 2020', json_name='releasedSince', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='updated_since', full_name='ncbi.datasets.v1.VirusDatasetFilter.updated_since', index=5, number=11, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031\035\022\033\n\n2021-07-18\022\rJuly 18, 2021', json_name='updatedSince', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='host', full_name='ncbi.datasets.v1.VirusDatasetFilter.host', index=6, number=7, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031\020\022\016\n\005human\022\005human', json_name='host', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='pangolin_classification', full_name='ncbi.datasets.v1.VirusDatasetFilter.pangolin_classification', index=7, number=8, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='pangolinClassification', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='geo_location', full_name='ncbi.datasets.v1.VirusDatasetFilter.geo_location', index=8, number=9, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031\031\022\n\n\003USA\022\003USA\022\013\n\002TX\022\005Texas', json_name='geoLocation', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='complete_only', full_name='ncbi.datasets.v1.VirusDatasetFilter.complete_only', index=9, number=10, type=8, cpp_type=7, label=1, has_default_value=False, default_value=False, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031@\n\005false\022!\n\004true\022\031Limit to complete genomes\022\024\n\005false\022\013All genomes', json_name='completeOnly', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=16067, serialized_end=17058, ) _VIRUSDATAREPORTREQUEST = _descriptor.Descriptor( name='VirusDataReportRequest', full_name='ncbi.datasets.v1.VirusDataReportRequest', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='filter', full_name='ncbi.datasets.v1.VirusDataReportRequest.filter', index=0, number=1, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='filter', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='returned_content', full_name='ncbi.datasets.v1.VirusDataReportRequest.returned_content', index=1, number=2, type=14, cpp_type=8, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='returnedContent', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='table_fields', full_name='ncbi.datasets.v1.VirusDataReportRequest.table_fields', index=2, number=3, type=9, cpp_type=9, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031=\022;\n\taccession\n\013is-complete\n\014is-annotated\022\023Virus Genome Fields', json_name='tableFields', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='table_format', full_name='ncbi.datasets.v1.VirusDataReportRequest.table_format', index=3, number=6, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='tableFormat', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='page_size', full_name='ncbi.datasets.v1.VirusDataReportRequest.page_size', index=4, number=4, type=5, cpp_type=1, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031\004\n\00220', json_name='pageSize', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='page_token', full_name='ncbi.datasets.v1.VirusDataReportRequest.page_token', index=5, number=5, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='pageToken', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ _VIRUSDATAREPORTREQUEST_CONTENTTYPE, ], serialized_options=b'\302\360\031\"\n taxon: 2697049\nrefseq_only: true', is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=17061, serialized_end=17541, ) _SARS2PROTEINDATASETREQUEST = _descriptor.Descriptor( name='Sars2ProteinDatasetRequest', full_name='ncbi.datasets.v1.Sars2ProteinDatasetRequest', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='proteins', full_name='ncbi.datasets.v1.Sars2ProteinDatasetRequest.proteins', index=0, number=1, type=9, cpp_type=9, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031^\022\036\n\rspike protein\022\rSpike Protein\022<\n\rspike protein\n\020envelope protein\n\004RdRp\022\023SARS-CoV-2 proteins', json_name='proteins', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='refseq_only', full_name='ncbi.datasets.v1.Sars2ProteinDatasetRequest.refseq_only', index=1, number=4, type=8, cpp_type=7, label=1, has_default_value=False, default_value=False, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031P\n\005false\022\037\n\004true\022\027Limit to RefSeq genomes\022&\n\005false\022\035Both GenBank & RefSeq genomes', json_name='refseqOnly', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='annotated_only', full_name='ncbi.datasets.v1.Sars2ProteinDatasetRequest.annotated_only', index=2, number=5, type=8, cpp_type=7, label=1, has_default_value=False, default_value=False, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031A\n\005false\022\"\n\004true\022\032Limit to annotated genomes\022\024\n\005false\022\013All genomes', json_name='annotatedOnly', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='released_since', full_name='ncbi.datasets.v1.Sars2ProteinDatasetRequest.released_since', index=3, number=6, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031\036\022\034\n\n2020-08-01\022\016August 1, 2020', json_name='releasedSince', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='updated_since', full_name='ncbi.datasets.v1.Sars2ProteinDatasetRequest.updated_since', index=4, number=15, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031\035\022\033\n\n2021-07-18\022\rJuly 18, 2021', json_name='updatedSince', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='host', full_name='ncbi.datasets.v1.Sars2ProteinDatasetRequest.host', index=5, number=7, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031\020\022\016\n\005human\022\005human', json_name='host', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='geo_location', full_name='ncbi.datasets.v1.Sars2ProteinDatasetRequest.geo_location', index=6, number=8, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031\031\022\n\n\003USA\022\003USA\022\013\n\002TX\022\005Texas', json_name='geoLocation', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='complete_only', full_name='ncbi.datasets.v1.Sars2ProteinDatasetRequest.complete_only', index=7, number=9, type=8, cpp_type=7, label=1, has_default_value=False, default_value=False, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031@\n\005false\022!\n\004true\022\031Limit to complete genomes\022\024\n\005false\022\013All genomes', json_name='completeOnly', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='table_fields', full_name='ncbi.datasets.v1.Sars2ProteinDatasetRequest.table_fields', index=8, number=10, type=14, cpp_type=8, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031N\022L\n\024nucleotide_accession\n\021nucleotide_length\n\020nuc_completeness\022\017Assembly Fields', json_name='tableFields', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='exclude_sequence', full_name='ncbi.datasets.v1.Sars2ProteinDatasetRequest.exclude_sequence', index=9, number=12, type=8, cpp_type=7, label=1, has_default_value=False, default_value=False, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\332\360\031\002\010\002\302\360\031L\n\005false\022 \n\004true\022\030Exclude genomic sequence\022!\n\005false\022\030Include genomic sequence', json_name='excludeSequence', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='include_annotation_type', full_name='ncbi.datasets.v1.Sars2ProteinDatasetRequest.include_annotation_type', index=10, number=13, type=14, cpp_type=8, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\332\360\031\002\010\002\302\360\031K\022 \n\tCDS_FASTA\022\023Transcript sequence\022\'\n\tCDS_FASTA\n\nPROT_FASTA\022\016All annotation', json_name='includeAnnotationType', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='format', full_name='ncbi.datasets.v1.Sars2ProteinDatasetRequest.format', index=11, number=14, type=14, cpp_type=8, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\0312\n\003tsv\022\n\n\003tsv\022\003TSV\022\n\n\003csv\022\003CSV\022\023\n\005jsonl\022\nJSON Lines', json_name='format', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=17544, serialized_end=18932, ) _VIRUSAVAILABILITYREQUEST = _descriptor.Descriptor( name='VirusAvailabilityRequest', full_name='ncbi.datasets.v1.VirusAvailabilityRequest', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='accessions', full_name='ncbi.datasets.v1.VirusAvailabilityRequest.accessions', index=0, number=1, type=9, cpp_type=9, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031\206\001\022\203\001\n\027NC_045512.2,NC_038294.1\022hSARS-COV-2 isolate Wuhan-Hu-1 and Middle East respiratory syndrome-related coronavirus, complete genomes', json_name='accessions', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=18935, serialized_end=19136, ) _VIRUSAVAILABILITY = _descriptor.Descriptor( name='VirusAvailability', full_name='ncbi.datasets.v1.VirusAvailability', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='valid_accessions', full_name='ncbi.datasets.v1.VirusAvailability.valid_accessions', index=0, number=1, type=9, cpp_type=9, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='validAccessions', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='invalid_accessions', full_name='ncbi.datasets.v1.VirusAvailability.invalid_accessions', index=1, number=2, type=9, cpp_type=9, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='invalidAccessions', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='message', full_name='ncbi.datasets.v1.VirusAvailability.message', index=2, number=3, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='message', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=19139, serialized_end=19274, ) _DOWNLOADSUMMARY_HYDRATED = _descriptor.Descriptor( name='Hydrated', full_name='ncbi.datasets.v1.DownloadSummary.Hydrated', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='estimated_file_size_mb', full_name='ncbi.datasets.v1.DownloadSummary.Hydrated.estimated_file_size_mb', index=0, number=1, type=13, cpp_type=3, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='estimatedFileSizeMb', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='url', full_name='ncbi.datasets.v1.DownloadSummary.Hydrated.url', index=1, number=2, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='url', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='cli_download_command_line', full_name='ncbi.datasets.v1.DownloadSummary.Hydrated.cli_download_command_line', index=2, number=3, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='cliDownloadCommandLine', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=19800, serialized_end=19940, ) _DOWNLOADSUMMARY_DEHYDRATED = _descriptor.Descriptor( name='Dehydrated', full_name='ncbi.datasets.v1.DownloadSummary.Dehydrated', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='estimated_file_size_mb', full_name='ncbi.datasets.v1.DownloadSummary.Dehydrated.estimated_file_size_mb', index=0, number=1, type=13, cpp_type=3, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='estimatedFileSizeMb', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='url', full_name='ncbi.datasets.v1.DownloadSummary.Dehydrated.url', index=1, number=2, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='url', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='cli_download_command_line', full_name='ncbi.datasets.v1.DownloadSummary.Dehydrated.cli_download_command_line', index=2, number=3, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='cliDownloadCommandLine', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='cli_rehydrate_command_line', full_name='ncbi.datasets.v1.DownloadSummary.Dehydrated.cli_rehydrate_command_line', index=3, number=4, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='cliRehydrateCommandLine', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=19943, serialized_end=20146, ) _DOWNLOADSUMMARY_FILESUMMARY = _descriptor.Descriptor( name='FileSummary', full_name='ncbi.datasets.v1.DownloadSummary.FileSummary', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='file_count', full_name='ncbi.datasets.v1.DownloadSummary.FileSummary.file_count', index=0, number=1, type=13, cpp_type=3, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='fileCount', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='size_mb', full_name='ncbi.datasets.v1.DownloadSummary.FileSummary.size_mb', index=1, number=2, type=2, cpp_type=6, label=1, has_default_value=False, default_value=float(0), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='sizeMb', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=20148, serialized_end=20217, ) _DOWNLOADSUMMARY_AVAILABLEFILES = _descriptor.Descriptor( name='AvailableFiles', full_name='ncbi.datasets.v1.DownloadSummary.AvailableFiles', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='all_genomic_fasta', full_name='ncbi.datasets.v1.DownloadSummary.AvailableFiles.all_genomic_fasta', index=0, number=1, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='allGenomicFasta', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='genome_gff', full_name='ncbi.datasets.v1.DownloadSummary.AvailableFiles.genome_gff', index=1, number=2, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='genomeGff', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='genome_gbff', full_name='ncbi.datasets.v1.DownloadSummary.AvailableFiles.genome_gbff', index=2, number=3, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='genomeGbff', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='rna_fasta', full_name='ncbi.datasets.v1.DownloadSummary.AvailableFiles.rna_fasta', index=3, number=4, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='rnaFasta', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='prot_fasta', full_name='ncbi.datasets.v1.DownloadSummary.AvailableFiles.prot_fasta', index=4, number=5, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='protFasta', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='genome_gtf', full_name='ncbi.datasets.v1.DownloadSummary.AvailableFiles.genome_gtf', index=5, number=6, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='genomeGtf', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='cds_fasta', full_name='ncbi.datasets.v1.DownloadSummary.AvailableFiles.cds_fasta', index=6, number=7, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='cdsFasta', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='sequence_report', full_name='ncbi.datasets.v1.DownloadSummary.AvailableFiles.sequence_report', index=7, number=8, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='sequenceReport', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=20220, serialized_end=20881, ) _DOWNLOADSUMMARY = _descriptor.Descriptor( name='DownloadSummary', full_name='ncbi.datasets.v1.DownloadSummary', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='record_count', full_name='ncbi.datasets.v1.DownloadSummary.record_count', index=0, number=1, type=13, cpp_type=3, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='recordCount', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='assembly_count', full_name='ncbi.datasets.v1.DownloadSummary.assembly_count', index=1, number=2, type=13, cpp_type=3, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\030\001', json_name='assemblyCount', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='resource_updated_on', full_name='ncbi.datasets.v1.DownloadSummary.resource_updated_on', index=2, number=4, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='resourceUpdatedOn', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='hydrated', full_name='ncbi.datasets.v1.DownloadSummary.hydrated', index=3, number=5, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='hydrated', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='dehydrated', full_name='ncbi.datasets.v1.DownloadSummary.dehydrated', index=4, number=6, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='dehydrated', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='errors', full_name='ncbi.datasets.v1.DownloadSummary.errors', index=5, number=7, type=11, cpp_type=10, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\030\001', json_name='errors', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='messages', full_name='ncbi.datasets.v1.DownloadSummary.messages', index=6, number=8, type=11, cpp_type=10, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='messages', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='available_files', full_name='ncbi.datasets.v1.DownloadSummary.available_files', index=7, number=9, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='availableFiles', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[_DOWNLOADSUMMARY_HYDRATED, _DOWNLOADSUMMARY_DEHYDRATED, _DOWNLOADSUMMARY_FILESUMMARY, _DOWNLOADSUMMARY_AVAILABLEFILES, ], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=19277, serialized_end=20881, ) _TABULAROUTPUT = _descriptor.Descriptor( name='TabularOutput', full_name='ncbi.datasets.v1.TabularOutput', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='data', full_name='ncbi.datasets.v1.TabularOutput.data', index=0, number=1, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='data', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=20883, serialized_end=20918, ) _ELEMENTFLANKCONFIG = _descriptor.Descriptor( name='ElementFlankConfig', full_name='ncbi.datasets.v1.ElementFlankConfig', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='length', full_name='ncbi.datasets.v1.ElementFlankConfig.length', index=0, number=1, type=13, cpp_type=3, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='length', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=20920, serialized_end=20964, ) _REFGENECATALOGDATASETREQUEST = _descriptor.Descriptor( name='RefGeneCatalogDatasetRequest', full_name='ncbi.datasets.v1.RefGeneCatalogDatasetRequest', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='opaque_solr_query', full_name='ncbi.datasets.v1.RefGeneCatalogDatasetRequest.opaque_solr_query', index=0, number=1, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='opaqueSolrQuery', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='files', full_name='ncbi.datasets.v1.RefGeneCatalogDatasetRequest.files', index=1, number=2, type=14, cpp_type=8, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\332\360\031\002\010\002', json_name='files', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='element_flank_config', full_name='ncbi.datasets.v1.RefGeneCatalogDatasetRequest.element_flank_config', index=2, number=3, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='elementFlankConfig', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ _REFGENECATALOGDATASETREQUEST_FILETYPE, ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ _descriptor.OneofDescriptor( name='query', full_name='ncbi.datasets.v1.RefGeneCatalogDatasetRequest.query', index=0, containing_type=None, create_key=_descriptor._internal_create_key, fields=[]), ], serialized_start=20967, serialized_end=21352, ) _MICROBIGGEDATASETREQUEST = _descriptor.Descriptor( name='MicroBiggeDatasetRequest', full_name='ncbi.datasets.v1.MicroBiggeDatasetRequest', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='opaque_solr_query', full_name='ncbi.datasets.v1.MicroBiggeDatasetRequest.opaque_solr_query', index=0, number=1, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='opaqueSolrQuery', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='files', full_name='ncbi.datasets.v1.MicroBiggeDatasetRequest.files', index=1, number=2, type=14, cpp_type=8, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\332\360\031\002\010\002', json_name='files', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='element_flank_config', full_name='ncbi.datasets.v1.MicroBiggeDatasetRequest.element_flank_config', index=2, number=3, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='elementFlankConfig', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ _MICROBIGGEDATASETREQUEST_FILETYPE, ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ _descriptor.OneofDescriptor( name='query', full_name='ncbi.datasets.v1.MicroBiggeDatasetRequest.query', index=0, containing_type=None, create_key=_descriptor._internal_create_key, fields=[]), ], serialized_start=21355, serialized_end=21727, ) _VERSIONREPLY = _descriptor.Descriptor( name='VersionReply', full_name='ncbi.datasets.v1.VersionReply', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='version', full_name='ncbi.datasets.v1.VersionReply.version', index=0, number=1, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='version', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='major_ver', full_name='ncbi.datasets.v1.VersionReply.major_ver', index=1, number=2, type=13, cpp_type=3, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='majorVer', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='minor_ver', full_name='ncbi.datasets.v1.VersionReply.minor_ver', index=2, number=3, type=13, cpp_type=3, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='minorVer', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='patch_ver', full_name='ncbi.datasets.v1.VersionReply.patch_ver', index=3, number=4, type=13, cpp_type=3, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='patchVer', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=21729, serialized_end=21856, ) _PROKARYOTEGENEREQUEST_GENEFLANKCONFIG = _descriptor.Descriptor( name='GeneFlankConfig', full_name='ncbi.datasets.v1.ProkaryoteGeneRequest.GeneFlankConfig', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='length', full_name='ncbi.datasets.v1.ProkaryoteGeneRequest.GeneFlankConfig.length', index=0, number=1, type=13, cpp_type=3, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='length', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=22406, serialized_end=22447, ) _PROKARYOTEGENEREQUEST = _descriptor.Descriptor( name='ProkaryoteGeneRequest', full_name='ncbi.datasets.v1.ProkaryoteGeneRequest', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='accessions', full_name='ncbi.datasets.v1.ProkaryoteGeneRequest.accessions', index=0, number=1, type=9, cpp_type=9, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031o\022.\n\016WP_015878339.1\022\034DNA-deoxyinosine glycosylase\022=\n\016WP_001040085.1\022+type II CRISPR RNA-guided endonuclease Cas9', json_name='accessions', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='include_annotation_type', full_name='ncbi.datasets.v1.ProkaryoteGeneRequest.include_annotation_type', index=1, number=2, type=14, cpp_type=8, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\332\360\031\002\010\002\302\360\031\231\001\022\036\n\nFASTA_GENE\022\020Gene range FASTA\022?\n\tFASTA_RNA\n\rFASTA_PROTEIN\022#Transcript & protein sequence FASTA\0226\n\nFASTA_GENE\n\tFASTA_RNA\n\rFASTA_PROTEIN\022\016All annotation', json_name='includeAnnotationType', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='gene_flank_config', full_name='ncbi.datasets.v1.ProkaryoteGeneRequest.gene_flank_config', index=2, number=3, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='geneFlankConfig', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='taxon', full_name='ncbi.datasets.v1.ProkaryoteGeneRequest.taxon', index=3, number=4, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='taxon', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[_PROKARYOTEGENEREQUEST_GENEFLANKCONFIG, ], enum_types=[ ], serialized_options=b'\302\360\031/\n-accessions:\n- WP_000000001.1\n- WP_000000002.1', is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=21859, serialized_end=22500, ) _SLEEPREQUEST = _descriptor.Descriptor( name='SleepRequest', full_name='ncbi.datasets.v1.SleepRequest', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='sleep_msec', full_name='ncbi.datasets.v1.SleepRequest.sleep_msec', index=0, number=1, type=5, cpp_type=1, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='sleepMsec', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='error_rate', full_name='ncbi.datasets.v1.SleepRequest.error_rate', index=1, number=2, type=2, cpp_type=6, label=1, has_default_value=False, default_value=float(0), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='errorRate', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=22502, serialized_end=22578, ) _SLEEPREPLY = _descriptor.Descriptor( name='SleepReply', full_name='ncbi.datasets.v1.SleepReply', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='reply', full_name='ncbi.datasets.v1.SleepReply.reply', index=0, number=1, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='reply', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=22580, serialized_end=22614, ) _TAXONOMYNODE_COUNTBYTYPE = _descriptor.Descriptor( name='CountByType', full_name='ncbi.datasets.v1.TaxonomyNode.CountByType', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='type', full_name='ncbi.datasets.v1.TaxonomyNode.CountByType.type', index=0, number=1, type=14, cpp_type=8, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='type', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='count', full_name='ncbi.datasets.v1.TaxonomyNode.CountByType.count', index=1, number=2, type=13, cpp_type=3, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='count', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=23151, serialized_end=23235, ) _TAXONOMYNODE = _descriptor.Descriptor( name='TaxonomyNode', full_name='ncbi.datasets.v1.TaxonomyNode', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='tax_id', full_name='ncbi.datasets.v1.TaxonomyNode.tax_id', index=0, number=1, type=13, cpp_type=3, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='taxId', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='organism_name', full_name='ncbi.datasets.v1.TaxonomyNode.organism_name', index=1, number=2, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='organismName', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='common_name', full_name='ncbi.datasets.v1.TaxonomyNode.common_name', index=2, number=3, type=9, cpp_type=9, label=1, has_default_value=False, default_value=b"".decode('utf-8'), message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='commonName', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='lineage', full_name='ncbi.datasets.v1.TaxonomyNode.lineage', index=3, number=4, type=13, cpp_type=3, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='lineage', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='children', full_name='ncbi.datasets.v1.TaxonomyNode.children', index=4, number=5, type=13, cpp_type=3, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='children', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='descendent_with_described_species_names_count', full_name='ncbi.datasets.v1.TaxonomyNode.descendent_with_described_species_names_count', index=5, number=6, type=13, cpp_type=3, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='descendentWithDescribedSpeciesNamesCount', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='rank', full_name='ncbi.datasets.v1.TaxonomyNode.rank', index=6, number=7, type=14, cpp_type=8, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='rank', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='has_described_species_name', full_name='ncbi.datasets.v1.TaxonomyNode.has_described_species_name', index=7, number=8, type=8, cpp_type=7, label=1, has_default_value=False, default_value=False, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='hasDescribedSpeciesName', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='counts', full_name='ncbi.datasets.v1.TaxonomyNode.counts', index=8, number=9, type=11, cpp_type=10, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='counts', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='min_ord', full_name='ncbi.datasets.v1.TaxonomyNode.min_ord', index=9, number=20, type=13, cpp_type=3, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='minOrd', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='max_ord', full_name='ncbi.datasets.v1.TaxonomyNode.max_ord', index=10, number=21, type=13, cpp_type=3, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='maxOrd', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='_indexed_names', full_name='ncbi.datasets.v1.TaxonomyNode._indexed_names', index=11, number=101, type=9, cpp_type=9, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='IndexedNames', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[_TAXONOMYNODE_COUNTBYTYPE, ], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=22617, serialized_end=23235, ) _TAXONOMYMETADATAREQUEST = _descriptor.Descriptor( name='TaxonomyMetadataRequest', full_name='ncbi.datasets.v1.TaxonomyMetadataRequest', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='taxons', full_name='ncbi.datasets.v1.TaxonomyMetadataRequest.taxons', index=0, number=1, type=9, cpp_type=9, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031u\022\'\n\0049606\n\00510090\022\030NCBI Taxonomy Identifier\022\033\n\005human\n\005mouse\022\013Common Name\022-\n\014Homo sapiens\n\014Mus musculus\022\017Scientific Name', json_name='taxons', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='returned_content', full_name='ncbi.datasets.v1.TaxonomyMetadataRequest.returned_content', index=1, number=2, type=14, cpp_type=8, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='returnedContent', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ _TAXONOMYMETADATAREQUEST_CONTENTTYPE, ], serialized_options=b'\302\360\031\030\n\026taxons:\n- 9606\n- mouse', is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=23238, serialized_end=23580, ) _TAXONOMYMATCH = _descriptor.Descriptor( name='TaxonomyMatch', full_name='ncbi.datasets.v1.TaxonomyMatch', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='warnings', full_name='ncbi.datasets.v1.TaxonomyMatch.warnings', index=0, number=1, type=11, cpp_type=10, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='warnings', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='errors', full_name='ncbi.datasets.v1.TaxonomyMatch.errors', index=1, number=2, type=11, cpp_type=10, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='errors', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='query', full_name='ncbi.datasets.v1.TaxonomyMatch.query', index=2, number=3, type=9, cpp_type=9, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='query', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='taxonomy', full_name='ncbi.datasets.v1.TaxonomyMatch.taxonomy', index=3, number=4, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='taxonomy', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=23583, serialized_end=23784, ) _TAXONOMYMETADATARESPONSE = _descriptor.Descriptor( name='TaxonomyMetadataResponse', full_name='ncbi.datasets.v1.TaxonomyMetadataResponse', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='messages', full_name='ncbi.datasets.v1.TaxonomyMetadataResponse.messages', index=0, number=1, type=11, cpp_type=10, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='messages', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='taxonomy_nodes', full_name='ncbi.datasets.v1.TaxonomyMetadataResponse.taxonomy_nodes', index=1, number=2, type=11, cpp_type=10, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='taxonomyNodes', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=23787, serialized_end=23940, ) _TAXONOMYFILTEREDSUBTREEREQUEST = _descriptor.Descriptor( name='TaxonomyFilteredSubtreeRequest', full_name='ncbi.datasets.v1.TaxonomyFilteredSubtreeRequest', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='taxons', full_name='ncbi.datasets.v1.TaxonomyFilteredSubtreeRequest.taxons', index=0, number=1, type=9, cpp_type=9, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=b'\302\360\031u\022\'\n\0049606\n\00510090\022\030NCBI Taxonomy Identifier\022\033\n\005human\n\005mouse\022\013Common Name\022-\n\014Homo sapiens\n\014Mus musculus\022\017Scientific Name', json_name='taxons', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='specified_limit', full_name='ncbi.datasets.v1.TaxonomyFilteredSubtreeRequest.specified_limit', index=1, number=2, type=8, cpp_type=7, label=1, has_default_value=False, default_value=False, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='specifiedLimit', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='rank_limits', full_name='ncbi.datasets.v1.TaxonomyFilteredSubtreeRequest.rank_limits', index=2, number=3, type=14, cpp_type=8, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='rankLimits', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=23943, serialized_end=24234, ) _TAXONOMYFILTEREDSUBTREERESPONSE_EDGE = _descriptor.Descriptor( name='Edge', full_name='ncbi.datasets.v1.TaxonomyFilteredSubtreeResponse.Edge', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='visible_children', full_name='ncbi.datasets.v1.TaxonomyFilteredSubtreeResponse.Edge.visible_children', index=0, number=1, type=13, cpp_type=3, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='visibleChildren', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='children_status', full_name='ncbi.datasets.v1.TaxonomyFilteredSubtreeResponse.Edge.children_status', index=1, number=2, type=14, cpp_type=8, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='childrenStatus', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ _TAXONOMYFILTEREDSUBTREERESPONSE_EDGE_CHILDSTATUS, ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=24492, serialized_end=24730, ) _TAXONOMYFILTEREDSUBTREERESPONSE_EDGESENTRY = _descriptor.Descriptor( name='EdgesEntry', full_name='ncbi.datasets.v1.TaxonomyFilteredSubtreeResponse.EdgesEntry', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='key', full_name='ncbi.datasets.v1.TaxonomyFilteredSubtreeResponse.EdgesEntry.key', index=0, number=1, type=13, cpp_type=3, label=1, has_default_value=False, default_value=0, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='key', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='value', full_name='ncbi.datasets.v1.TaxonomyFilteredSubtreeResponse.EdgesEntry.value', index=1, number=2, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='value', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=b'8\001', is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=24732, serialized_end=24844, ) _TAXONOMYFILTEREDSUBTREERESPONSE = _descriptor.Descriptor( name='TaxonomyFilteredSubtreeResponse', full_name='ncbi.datasets.v1.TaxonomyFilteredSubtreeResponse', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='root_nodes', full_name='ncbi.datasets.v1.TaxonomyFilteredSubtreeResponse.root_nodes', index=0, number=1, type=13, cpp_type=3, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='rootNodes', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='edges', full_name='ncbi.datasets.v1.TaxonomyFilteredSubtreeResponse.edges', index=1, number=2, type=11, cpp_type=10, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='edges', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='warnings', full_name='ncbi.datasets.v1.TaxonomyFilteredSubtreeResponse.warnings', index=2, number=3, type=11, cpp_type=10, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='warnings', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='errors', full_name='ncbi.datasets.v1.TaxonomyFilteredSubtreeResponse.errors', index=3, number=4, type=11, cpp_type=10, label=3, has_default_value=False, default_value=[], message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='errors', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[_TAXONOMYFILTEREDSUBTREERESPONSE_EDGE, _TAXONOMYFILTEREDSUBTREERESPONSE_EDGESENTRY, ], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ ], serialized_start=24237, serialized_end=24844, ) _DATASETREQUEST = _descriptor.Descriptor( name='DatasetRequest', full_name='ncbi.datasets.v1.DatasetRequest', filename=None, file=DESCRIPTOR, containing_type=None, create_key=_descriptor._internal_create_key, fields=[ _descriptor.FieldDescriptor( name='genome_v1', full_name='ncbi.datasets.v1.DatasetRequest.genome_v1', index=0, number=1, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='genomeV1', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='gene_v1', full_name='ncbi.datasets.v1.DatasetRequest.gene_v1', index=1, number=2, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='geneV1', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), _descriptor.FieldDescriptor( name='virus_v1', full_name='ncbi.datasets.v1.DatasetRequest.virus_v1', index=2, number=3, type=11, cpp_type=10, label=1, has_default_value=False, default_value=None, message_type=None, enum_type=None, containing_type=None, is_extension=False, extension_scope=None, serialized_options=None, json_name='virusV1', file=DESCRIPTOR, create_key=_descriptor._internal_create_key), ], extensions=[ ], nested_types=[], enum_types=[ ], serialized_options=None, is_extendable=False, syntax='proto3', extension_ranges=[], oneofs=[ _descriptor.OneofDescriptor( name='request', full_name='ncbi.datasets.v1.DatasetRequest.request', index=0, containing_type=None, create_key=_descriptor._internal_create_key, fields=[]), ], serialized_start=24847, serialized_end=25080, ) _ASSEMBLYDATASETDESCRIPTORSFILTER.fields_by_name['assembly_source'].enum_type = _ASSEMBLYDATASETDESCRIPTORSFILTER_ASSEMBLYSOURCE _ASSEMBLYDATASETDESCRIPTORSFILTER.fields_by_name['assembly_version'].enum_type = _ASSEMBLYDATASETDESCRIPTORSFILTER_ASSEMBLYVERSION _ASSEMBLYDATASETDESCRIPTORSFILTER.fields_by_name['assembly_level'].enum_type = _ASSEMBLYDATASETDESCRIPTORSFILTER_ASSEMBLYLEVEL _ASSEMBLYDATASETDESCRIPTORSFILTER.fields_by_name['first_release_date'].message_type = google_dot_protobuf_dot_timestamp__pb2._TIMESTAMP _ASSEMBLYDATASETDESCRIPTORSFILTER.fields_by_name['last_release_date'].message_type = google_dot_protobuf_dot_timestamp__pb2._TIMESTAMP _ASSEMBLYDATASETDESCRIPTORSFILTER_ASSEMBLYSOURCE.containing_type = _ASSEMBLYDATASETDESCRIPTORSFILTER _ASSEMBLYDATASETDESCRIPTORSFILTER_ASSEMBLYVERSION.containing_type = _ASSEMBLYDATASETDESCRIPTORSFILTER _ASSEMBLYDATASETDESCRIPTORSFILTER_ASSEMBLYLEVEL.containing_type = _ASSEMBLYDATASETDESCRIPTORSFILTER _ASSEMBLYMETADATAREQUEST_BIOPROJECTS.containing_type = _ASSEMBLYMETADATAREQUEST _ASSEMBLYMETADATAREQUEST.fields_by_name['accessions'].message_type = _ACCESSIONS _ASSEMBLYMETADATAREQUEST.fields_by_name['bioprojects'].message_type = _ASSEMBLYMETADATAREQUEST_BIOPROJECTS _ASSEMBLYMETADATAREQUEST.fields_by_name['filters'].message_type = _ASSEMBLYDATASETDESCRIPTORSFILTER _ASSEMBLYMETADATAREQUEST.fields_by_name['returned_content'].enum_type = _ASSEMBLYMETADATAREQUEST_CONTENTTYPE _ASSEMBLYMETADATAREQUEST_CONTENTTYPE.containing_type = _ASSEMBLYMETADATAREQUEST _ASSEMBLYMETADATAREQUEST.oneofs_by_name['records'].fields.append( _ASSEMBLYMETADATAREQUEST.fields_by_name['limit']) _ASSEMBLYMETADATAREQUEST.fields_by_name['limit'].containing_oneof = _ASSEMBLYMETADATAREQUEST.oneofs_by_name['records'] _ASSEMBLYMETADATAREQUEST.oneofs_by_name['records'].fields.append( _ASSEMBLYMETADATAREQUEST.fields_by_name['page_size']) _ASSEMBLYMETADATAREQUEST.fields_by_name['page_size'].containing_oneof = _ASSEMBLYMETADATAREQUEST.oneofs_by_name['records'] _ASSEMBLYDATASETDESCRIPTORSREQUEST.fields_by_name['filters'].message_type = _ASSEMBLYDATASETDESCRIPTORSFILTER _ASSEMBLYDATASETDESCRIPTORSREQUEST.fields_by_name['returned_content'].enum_type = _ASSEMBLYDATASETDESCRIPTORSREQUEST_CONTENTTYPE _ASSEMBLYDATASETDESCRIPTORSREQUEST_CONTENTTYPE.containing_type = _ASSEMBLYDATASETDESCRIPTORSREQUEST _ASSEMBLYDATASETDESCRIPTORSREQUEST.oneofs_by_name['id'].fields.append( _ASSEMBLYDATASETDESCRIPTORSREQUEST.fields_by_name['tax_id']) _ASSEMBLYDATASETDESCRIPTORSREQUEST.fields_by_name['tax_id'].containing_oneof = _ASSEMBLYDATASETDESCRIPTORSREQUEST.oneofs_by_name['id'] _ASSEMBLYDATASETDESCRIPTORSREQUEST.oneofs_by_name['id'].fields.append( _ASSEMBLYDATASETDESCRIPTORSREQUEST.fields_by_name['org_name']) _ASSEMBLYDATASETDESCRIPTORSREQUEST.fields_by_name['org_name'].containing_oneof = _ASSEMBLYDATASETDESCRIPTORSREQUEST.oneofs_by_name['id'] _ASSEMBLYDATASETDESCRIPTORSREQUEST.oneofs_by_name['id'].fields.append( _ASSEMBLYDATASETDESCRIPTORSREQUEST.fields_by_name['tax_name']) _ASSEMBLYDATASETDESCRIPTORSREQUEST.fields_by_name['tax_name'].containing_oneof = _ASSEMBLYDATASETDESCRIPTORSREQUEST.oneofs_by_name['id'] _ASSEMBLYDATASETDESCRIPTORSREQUEST.oneofs_by_name['id'].fields.append( _ASSEMBLYDATASETDESCRIPTORSREQUEST.fields_by_name['assembly_accession']) _ASSEMBLYDATASETDESCRIPTORSREQUEST.fields_by_name['assembly_accession'].containing_oneof = _ASSEMBLYDATASETDESCRIPTORSREQUEST.oneofs_by_name['id'] _ASSEMBLYDATASETDESCRIPTORSREQUEST.oneofs_by_name['records'].fields.append( _ASSEMBLYDATASETDESCRIPTORSREQUEST.fields_by_name['cutoff']) _ASSEMBLYDATASETDESCRIPTORSREQUEST.fields_by_name['cutoff'].containing_oneof = _ASSEMBLYDATASETDESCRIPTORSREQUEST.oneofs_by_name['records'] _ASSEMBLYDATASETDESCRIPTORSREQUEST.oneofs_by_name['records'].fields.append( _ASSEMBLYDATASETDESCRIPTORSREQUEST.fields_by_name['limit']) _ASSEMBLYDATASETDESCRIPTORSREQUEST.fields_by_name['limit'].containing_oneof = _ASSEMBLYDATASETDESCRIPTORSREQUEST.oneofs_by_name['records'] _ASSEMBLYDATASETDESCRIPTORS.fields_by_name['datasets'].message_type = _ASSEMBLYDATASETDESCRIPTOR _BIOPROJECTLINEAGE.fields_by_name['bioprojects'].message_type = _BIOPROJECT _ASSEMBLYDATASETDESCRIPTOR_CHROMOSOME.containing_type = _ASSEMBLYDATASETDESCRIPTOR _ASSEMBLYDATASETDESCRIPTOR.fields_by_name['bioproject_lineages'].message_type = _BIOPROJECTLINEAGE _ASSEMBLYDATASETDESCRIPTOR.fields_by_name['org'].message_type = _ORGANISM _ASSEMBLYDATASETDESCRIPTOR.fields_by_name['chromosomes'].message_type = _ASSEMBLYDATASETDESCRIPTOR_CHROMOSOME _ASSEMBLYDATASETDESCRIPTOR.fields_by_name['annotation_metadata'].message_type = _ANNOTATIONFORASSEMBLY _ASSEMBLYDATASETDESCRIPTOR.fields_by_name['biosample'].message_type = ncbi_dot_datasets_dot_v1_dot_reports_dot_biosample__pb2._BIOSAMPLEDESCRIPTOR _ANNOTATIONFORASSEMBLY_FILE.fields_by_name['type'].enum_type = _ANNOTATIONFORASSEMBLY_TYPE _ANNOTATIONFORASSEMBLY_FILE.containing_type = _ANNOTATIONFORASSEMBLY _ANNOTATIONFORASSEMBLY.fields_by_name['file'].message_type = _ANNOTATIONFORASSEMBLY_FILE _ANNOTATIONFORASSEMBLY.fields_by_name['stats'].message_type = _FEATURECOUNTS _ANNOTATIONFORASSEMBLY.fields_by_name['busco'].message_type = _BUSCOSTAT _ANNOTATIONFORASSEMBLY_TYPE.containing_type = _ANNOTATIONFORASSEMBLY _FEATURECOUNTS.fields_by_name['gene_counts'].message_type = _GENECOUNTS _ASSEMBLYDATASETREQUEST.fields_by_name['include_annotation_type'].enum_type = _ANNOTATIONFORASSEMBLY_TYPE _ASSEMBLYDATASETREQUEST.fields_by_name['hydrated'].enum_type = _ASSEMBLYDATASETREQUEST_RESOLUTION _ASSEMBLYDATASETREQUEST_RESOLUTION.containing_type = _ASSEMBLYDATASETREQUEST _ORGANISM_COUNTS.containing_type = _ORGANISM _ORGANISM_COUNTBYTYPE.fields_by_name['type'].enum_type = _COUNTTYPE _ORGANISM_COUNTBYTYPE.fields_by_name['counts'].message_type = _ORGANISM_COUNTS _ORGANISM_COUNTBYTYPE.containing_type = _ORGANISM _ORGANISM.fields_by_name['rank'].enum_type = _ORGANISM_RANKTYPE _ORGANISM.fields_by_name['assembly_counts'].message_type = _ORGANISM_COUNTS _ORGANISM.fields_by_name['counts'].message_type = _ORGANISM_COUNTBYTYPE _ORGANISM.fields_by_name['children'].message_type = _ORGANISM _ORGANISM.fields_by_name['merged'].message_type = _ORGANISM _ORGANISM_RANKTYPE.containing_type = _ORGANISM _TAXTREEREQUEST.oneofs_by_name['taxonomy'].fields.append( _TAXTREEREQUEST.fields_by_name['tax_id']) _TAXTREEREQUEST.fields_by_name['tax_id'].containing_oneof = _TAXTREEREQUEST.oneofs_by_name['taxonomy'] _TAXTREEREQUEST.oneofs_by_name['taxonomy'].fields.append( _TAXTREEREQUEST.fields_by_name['tax_token']) _TAXTREEREQUEST.fields_by_name['tax_token'].containing_oneof = _TAXTREEREQUEST.oneofs_by_name['taxonomy'] _TAXTREEREQUEST.oneofs_by_name['taxonomy'].fields.append( _TAXTREEREQUEST.fields_by_name['taxon']) _TAXTREEREQUEST.fields_by_name['taxon'].containing_oneof = _TAXTREEREQUEST.oneofs_by_name['taxonomy'] _ORGANISMQUERYREQUEST.fields_by_name['tax_rank_filter'].enum_type = _ORGANISMQUERYREQUEST_TAXRANKFILTER _ORGANISMQUERYREQUEST.fields_by_name['tax_resource_filter'].enum_type = _ORGANISMQUERYREQUEST_TAXONRESOURCEFILTER _ORGANISMQUERYREQUEST_TAXRANKFILTER.containing_type = _ORGANISMQUERYREQUEST _ORGANISMQUERYREQUEST_TAXONRESOURCEFILTER.containing_type = _ORGANISMQUERYREQUEST _ORGANISMQUERYREQUEST.oneofs_by_name['id'].fields.append( _ORGANISMQUERYREQUEST.fields_by_name['organism_query']) _ORGANISMQUERYREQUEST.fields_by_name['organism_query'].containing_oneof = _ORGANISMQUERYREQUEST.oneofs_by_name['id'] _ORGANISMQUERYREQUEST.oneofs_by_name['id'].fields.append( _ORGANISMQUERYREQUEST.fields_by_name['taxon_query']) _ORGANISMQUERYREQUEST.fields_by_name['taxon_query'].containing_oneof = _ORGANISMQUERYREQUEST.oneofs_by_name['id'] _SCINAMEANDIDS_SCINAMEANDID.containing_type = _SCINAMEANDIDS _SCINAMEANDIDS.fields_by_name['sci_name_and_ids'].message_type = _SCINAMEANDIDS_SCINAMEANDID _ORTHOLOGREQUEST.fields_by_name['returned_content'].enum_type = _ORTHOLOGREQUEST_CONTENTTYPE _ORTHOLOGREQUEST_CONTENTTYPE.containing_type = _ORTHOLOGREQUEST _ORTHOLOGSET.fields_by_name['genes'].message_type = _GENEMETADATA _GENEDATASETREQUEST_SYMBOLSFORTAXON.containing_type = _GENEDATASETREQUEST _GENEDATASETREQUEST_GENEIDS.containing_type = _GENEDATASETREQUEST _GENEDATASETREQUEST_SORT.fields_by_name['field'].enum_type = _GENEDATASETREQUEST_SORTFIELD _GENEDATASETREQUEST_SORT.fields_by_name['direction'].enum_type = _SORTDIRECTION _GENEDATASETREQUEST_SORT.containing_type = _GENEDATASETREQUEST _GENEDATASETREQUEST.fields_by_name['symbols_for_taxon'].message_type = _GENEDATASETREQUEST_SYMBOLSFORTAXON _GENEDATASETREQUEST.fields_by_name['include_annotation_type'].enum_type = _FASTA _GENEDATASETREQUEST.fields_by_name['returned_content'].enum_type = _GENEDATASETREQUEST_CONTENTTYPE _GENEDATASETREQUEST.fields_by_name['sort_schema'].message_type = _GENEDATASETREQUEST_SORT _GENEDATASETREQUEST_CONTENTTYPE.containing_type = _GENEDATASETREQUEST _GENEDATASETREQUEST_SORTFIELD.containing_type = _GENEDATASETREQUEST _ERROR.fields_by_name['assembly_error_code'].enum_type = _ERROR_ASSEMBLYERRORCODE _ERROR.fields_by_name['gene_error_code'].enum_type = _ERROR_GENEERRORCODE _ERROR.fields_by_name['virus_error_code'].enum_type = _ERROR_VIRUSERRORCODE _ERROR_ASSEMBLYERRORCODE.containing_type = _ERROR _ERROR_GENEERRORCODE.containing_type = _ERROR _ERROR_VIRUSERRORCODE.containing_type = _ERROR _ERROR.oneofs_by_name['code'].fields.append( _ERROR.fields_by_name['assembly_error_code']) _ERROR.fields_by_name['assembly_error_code'].containing_oneof = _ERROR.oneofs_by_name['code'] _ERROR.oneofs_by_name['code'].fields.append( _ERROR.fields_by_name['gene_error_code']) _ERROR.fields_by_name['gene_error_code'].containing_oneof = _ERROR.oneofs_by_name['code'] _ERROR.oneofs_by_name['code'].fields.append( _ERROR.fields_by_name['virus_error_code']) _ERROR.fields_by_name['virus_error_code'].containing_oneof = _ERROR.oneofs_by_name['code'] _WARNING_REPLACEDID.containing_type = _WARNING _WARNING.fields_by_name['gene_warning_code'].enum_type = _WARNING_GENEWARNINGCODE _WARNING.fields_by_name['replaced_id'].message_type = _WARNING_REPLACEDID _WARNING_GENEWARNINGCODE.containing_type = _WARNING _WARNING.oneofs_by_name['code'].fields.append( _WARNING.fields_by_name['gene_warning_code']) _WARNING.fields_by_name['gene_warning_code'].containing_oneof = _WARNING.oneofs_by_name['code'] _MESSAGE.fields_by_name['error'].message_type = _ERROR _MESSAGE.fields_by_name['warning'].message_type = _WARNING _MESSAGE.oneofs_by_name['message'].fields.append( _MESSAGE.fields_by_name['error']) _MESSAGE.fields_by_name['error'].containing_oneof = _MESSAGE.oneofs_by_name['message'] _MESSAGE.oneofs_by_name['message'].fields.append( _MESSAGE.fields_by_name['warning']) _MESSAGE.fields_by_name['warning'].containing_oneof = _MESSAGE.oneofs_by_name['message'] _GENEMATCH.fields_by_name['messages'].message_type = _MESSAGE _GENEMATCH.fields_by_name['warnings'].message_type = _WARNING _GENEMATCH.fields_by_name['gene'].message_type = ncbi_dot_datasets_dot_v1_dot_gene__descriptor__pb2._GENEDESCRIPTOR _GENEMATCH.fields_by_name['errors'].message_type = _ERROR _GENEMETADATA.fields_by_name['messages'].message_type = _MESSAGE _GENEMETADATA.fields_by_name['genes'].message_type = _GENEMATCH _ASSEMBLYMATCH.fields_by_name['messages'].message_type = _MESSAGE _ASSEMBLYMATCH.fields_by_name['assembly'].message_type = _ASSEMBLYDATASETDESCRIPTOR _ASSEMBLYMETADATA.fields_by_name['messages'].message_type = _MESSAGE _ASSEMBLYMETADATA.fields_by_name['assemblies'].message_type = _ASSEMBLYMATCH _GENEDESCRIPTORS.fields_by_name['genes'].message_type = ncbi_dot_datasets_dot_v1_dot_gene__descriptor__pb2._GENEDESCRIPTOR _GENEDESCRIPTORS.fields_by_name['errors'].message_type = _ERROR _ANNOTATIONFORVIRUS_TYPE.containing_type = _ANNOTATIONFORVIRUS _VIRUSDATASETREQUEST.fields_by_name['released_since'].message_type = google_dot_protobuf_dot_timestamp__pb2._TIMESTAMP _VIRUSDATASETREQUEST.fields_by_name['updated_since'].message_type = google_dot_protobuf_dot_timestamp__pb2._TIMESTAMP _VIRUSDATASETREQUEST.fields_by_name['table_fields'].enum_type = _VIRUSTABLEFIELD _VIRUSDATASETREQUEST.fields_by_name['include_annotation_type'].enum_type = _ANNOTATIONFORVIRUS_TYPE _VIRUSDATASETREQUEST.fields_by_name['format'].enum_type = _TABLEFORMAT _VIRUSDATASETFILTER.fields_by_name['released_since'].message_type = google_dot_protobuf_dot_timestamp__pb2._TIMESTAMP _VIRUSDATASETFILTER.fields_by_name['updated_since'].message_type = google_dot_protobuf_dot_timestamp__pb2._TIMESTAMP _VIRUSDATAREPORTREQUEST.fields_by_name['filter'].message_type = _VIRUSDATASETFILTER _VIRUSDATAREPORTREQUEST.fields_by_name['returned_content'].enum_type = _VIRUSDATAREPORTREQUEST_CONTENTTYPE _VIRUSDATAREPORTREQUEST_CONTENTTYPE.containing_type = _VIRUSDATAREPORTREQUEST _SARS2PROTEINDATASETREQUEST.fields_by_name['released_since'].message_type = google_dot_protobuf_dot_timestamp__pb2._TIMESTAMP _SARS2PROTEINDATASETREQUEST.fields_by_name['updated_since'].message_type = google_dot_protobuf_dot_timestamp__pb2._TIMESTAMP _SARS2PROTEINDATASETREQUEST.fields_by_name['table_fields'].enum_type = _VIRUSTABLEFIELD _SARS2PROTEINDATASETREQUEST.fields_by_name['include_annotation_type'].enum_type = _ANNOTATIONFORVIRUS_TYPE _SARS2PROTEINDATASETREQUEST.fields_by_name['format'].enum_type = _TABLEFORMAT _DOWNLOADSUMMARY_HYDRATED.containing_type = _DOWNLOADSUMMARY _DOWNLOADSUMMARY_DEHYDRATED.containing_type = _DOWNLOADSUMMARY _DOWNLOADSUMMARY_FILESUMMARY.containing_type = _DOWNLOADSUMMARY _DOWNLOADSUMMARY_AVAILABLEFILES.fields_by_name['all_genomic_fasta'].message_type = _DOWNLOADSUMMARY_FILESUMMARY _DOWNLOADSUMMARY_AVAILABLEFILES.fields_by_name['genome_gff'].message_type = _DOWNLOADSUMMARY_FILESUMMARY _DOWNLOADSUMMARY_AVAILABLEFILES.fields_by_name['genome_gbff'].message_type = _DOWNLOADSUMMARY_FILESUMMARY _DOWNLOADSUMMARY_AVAILABLEFILES.fields_by_name['rna_fasta'].message_type = _DOWNLOADSUMMARY_FILESUMMARY _DOWNLOADSUMMARY_AVAILABLEFILES.fields_by_name['prot_fasta'].message_type = _DOWNLOADSUMMARY_FILESUMMARY _DOWNLOADSUMMARY_AVAILABLEFILES.fields_by_name['genome_gtf'].message_type = _DOWNLOADSUMMARY_FILESUMMARY _DOWNLOADSUMMARY_AVAILABLEFILES.fields_by_name['cds_fasta'].message_type = _DOWNLOADSUMMARY_FILESUMMARY _DOWNLOADSUMMARY_AVAILABLEFILES.fields_by_name['sequence_report'].message_type = _DOWNLOADSUMMARY_FILESUMMARY _DOWNLOADSUMMARY_AVAILABLEFILES.containing_type = _DOWNLOADSUMMARY _DOWNLOADSUMMARY.fields_by_name['resource_updated_on'].message_type = google_dot_protobuf_dot_timestamp__pb2._TIMESTAMP _DOWNLOADSUMMARY.fields_by_name['hydrated'].message_type = _DOWNLOADSUMMARY_HYDRATED _DOWNLOADSUMMARY.fields_by_name['dehydrated'].message_type = _DOWNLOADSUMMARY_DEHYDRATED _DOWNLOADSUMMARY.fields_by_name['errors'].message_type = _ERROR _DOWNLOADSUMMARY.fields_by_name['messages'].message_type = _MESSAGE _DOWNLOADSUMMARY.fields_by_name['available_files'].message_type = _DOWNLOADSUMMARY_AVAILABLEFILES _REFGENECATALOGDATASETREQUEST.fields_by_name['files'].enum_type = _REFGENECATALOGDATASETREQUEST_FILETYPE _REFGENECATALOGDATASETREQUEST.fields_by_name['element_flank_config'].message_type = _ELEMENTFLANKCONFIG _REFGENECATALOGDATASETREQUEST_FILETYPE.containing_type = _REFGENECATALOGDATASETREQUEST _REFGENECATALOGDATASETREQUEST.oneofs_by_name['query'].fields.append( _REFGENECATALOGDATASETREQUEST.fields_by_name['opaque_solr_query']) _REFGENECATALOGDATASETREQUEST.fields_by_name['opaque_solr_query'].containing_oneof = _REFGENECATALOGDATASETREQUEST.oneofs_by_name['query'] _MICROBIGGEDATASETREQUEST.fields_by_name['files'].enum_type = _MICROBIGGEDATASETREQUEST_FILETYPE _MICROBIGGEDATASETREQUEST.fields_by_name['element_flank_config'].message_type = _ELEMENTFLANKCONFIG _MICROBIGGEDATASETREQUEST_FILETYPE.containing_type = _MICROBIGGEDATASETREQUEST _MICROBIGGEDATASETREQUEST.oneofs_by_name['query'].fields.append( _MICROBIGGEDATASETREQUEST.fields_by_name['opaque_solr_query']) _MICROBIGGEDATASETREQUEST.fields_by_name['opaque_solr_query'].containing_oneof = _MICROBIGGEDATASETREQUEST.oneofs_by_name['query'] _PROKARYOTEGENEREQUEST_GENEFLANKCONFIG.containing_type = _PROKARYOTEGENEREQUEST _PROKARYOTEGENEREQUEST.fields_by_name['include_annotation_type'].enum_type = _FASTA _PROKARYOTEGENEREQUEST.fields_by_name['gene_flank_config'].message_type = _PROKARYOTEGENEREQUEST_GENEFLANKCONFIG _TAXONOMYNODE_COUNTBYTYPE.fields_by_name['type'].enum_type = _COUNTTYPE _TAXONOMYNODE_COUNTBYTYPE.containing_type = _TAXONOMYNODE _TAXONOMYNODE.fields_by_name['rank'].enum_type = _ORGANISM_RANKTYPE _TAXONOMYNODE.fields_by_name['counts'].message_type = _TAXONOMYNODE_COUNTBYTYPE _TAXONOMYMETADATAREQUEST.fields_by_name['returned_content'].enum_type = _TAXONOMYMETADATAREQUEST_CONTENTTYPE _TAXONOMYMETADATAREQUEST_CONTENTTYPE.containing_type = _TAXONOMYMETADATAREQUEST _TAXONOMYMATCH.fields_by_name['warnings'].message_type = _WARNING _TAXONOMYMATCH.fields_by_name['errors'].message_type = _ERROR _TAXONOMYMATCH.fields_by_name['taxonomy'].message_type = _TAXONOMYNODE _TAXONOMYMETADATARESPONSE.fields_by_name['messages'].message_type = _MESSAGE _TAXONOMYMETADATARESPONSE.fields_by_name['taxonomy_nodes'].message_type = _TAXONOMYMATCH _TAXONOMYFILTEREDSUBTREEREQUEST.fields_by_name['rank_limits'].enum_type = _ORGANISM_RANKTYPE _TAXONOMYFILTEREDSUBTREERESPONSE_EDGE.fields_by_name['children_status'].enum_type = _TAXONOMYFILTEREDSUBTREERESPONSE_EDGE_CHILDSTATUS _TAXONOMYFILTEREDSUBTREERESPONSE_EDGE.containing_type = _TAXONOMYFILTEREDSUBTREERESPONSE _TAXONOMYFILTEREDSUBTREERESPONSE_EDGE_CHILDSTATUS.containing_type = _TAXONOMYFILTEREDSUBTREERESPONSE_EDGE _TAXONOMYFILTEREDSUBTREERESPONSE_EDGESENTRY.fields_by_name['value'].message_type = _TAXONOMYFILTEREDSUBTREERESPONSE_EDGE _TAXONOMYFILTEREDSUBTREERESPONSE_EDGESENTRY.containing_type = _TAXONOMYFILTEREDSUBTREERESPONSE _TAXONOMYFILTEREDSUBTREERESPONSE.fields_by_name['edges'].message_type = _TAXONOMYFILTEREDSUBTREERESPONSE_EDGESENTRY _TAXONOMYFILTEREDSUBTREERESPONSE.fields_by_name['warnings'].message_type = _WARNING _TAXONOMYFILTEREDSUBTREERESPONSE.fields_by_name['errors'].message_type = _ERROR _DATASETREQUEST.fields_by_name['genome_v1'].message_type = _ASSEMBLYDATASETREQUEST _DATASETREQUEST.fields_by_name['gene_v1'].message_type = _GENEDATASETREQUEST _DATASETREQUEST.fields_by_name['virus_v1'].message_type = _VIRUSDATASETREQUEST _DATASETREQUEST.oneofs_by_name['request'].fields.append( _DATASETREQUEST.fields_by_name['genome_v1']) _DATASETREQUEST.fields_by_name['genome_v1'].containing_oneof = _DATASETREQUEST.oneofs_by_name['request'] _DATASETREQUEST.oneofs_by_name['request'].fields.append( _DATASETREQUEST.fields_by_name['gene_v1']) _DATASETREQUEST.fields_by_name['gene_v1'].containing_oneof = _DATASETREQUEST.oneofs_by_name['request'] _DATASETREQUEST.oneofs_by_name['request'].fields.append( _DATASETREQUEST.fields_by_name['virus_v1']) _DATASETREQUEST.fields_by_name['virus_v1'].containing_oneof = _DATASETREQUEST.oneofs_by_name['request'] DESCRIPTOR.message_types_by_name['MethodPayloadRequest'] = _METHODPAYLOADREQUEST DESCRIPTOR.message_types_by_name['AssemblyDatasetDescriptorsFilter'] = _ASSEMBLYDATASETDESCRIPTORSFILTER DESCRIPTOR.message_types_by_name['Accessions'] = _ACCESSIONS DESCRIPTOR.message_types_by_name['AssemblyMetadataRequest'] = _ASSEMBLYMETADATAREQUEST DESCRIPTOR.message_types_by_name['AssemblyDatasetDescriptorsRequest'] = _ASSEMBLYDATASETDESCRIPTORSREQUEST DESCRIPTOR.message_types_by_name['AssemblyDatasetDescriptors'] = _ASSEMBLYDATASETDESCRIPTORS DESCRIPTOR.message_types_by_name['BioProject'] = _BIOPROJECT DESCRIPTOR.message_types_by_name['BioProjectLineage'] = _BIOPROJECTLINEAGE DESCRIPTOR.message_types_by_name['AssemblyDatasetDescriptor'] = _ASSEMBLYDATASETDESCRIPTOR DESCRIPTOR.message_types_by_name['BuscoStat'] = _BUSCOSTAT DESCRIPTOR.message_types_by_name['AnnotationForAssembly'] = _ANNOTATIONFORASSEMBLY DESCRIPTOR.message_types_by_name['FeatureCounts'] = _FEATURECOUNTS DESCRIPTOR.message_types_by_name['GeneCounts'] = _GENECOUNTS DESCRIPTOR.message_types_by_name['AssemblyDatasetRequest'] = _ASSEMBLYDATASETREQUEST DESCRIPTOR.message_types_by_name['AssemblyDatasetAvailability'] = _ASSEMBLYDATASETAVAILABILITY DESCRIPTOR.message_types_by_name['TaxidRequest'] = _TAXIDREQUEST DESCRIPTOR.message_types_by_name['TaxidReply'] = _TAXIDREPLY DESCRIPTOR.message_types_by_name['Organism'] = _ORGANISM DESCRIPTOR.message_types_by_name['TaxTreeRequest'] = _TAXTREEREQUEST DESCRIPTOR.message_types_by_name['OrganismQueryRequest'] = _ORGANISMQUERYREQUEST DESCRIPTOR.message_types_by_name['SciNameAndIds'] = _SCINAMEANDIDS DESCRIPTOR.message_types_by_name['OrthologRequest'] = _ORTHOLOGREQUEST DESCRIPTOR.message_types_by_name['OrthologSet'] = _ORTHOLOGSET DESCRIPTOR.message_types_by_name['GeneDatasetRequest'] = _GENEDATASETREQUEST DESCRIPTOR.message_types_by_name['Error'] = _ERROR DESCRIPTOR.message_types_by_name['Warning'] = _WARNING DESCRIPTOR.message_types_by_name['Message'] = _MESSAGE DESCRIPTOR.message_types_by_name['GeneMatch'] = _GENEMATCH DESCRIPTOR.message_types_by_name['GeneMetadata'] = _GENEMETADATA DESCRIPTOR.message_types_by_name['AssemblyMatch'] = _ASSEMBLYMATCH DESCRIPTOR.message_types_by_name['AssemblyMetadata'] = _ASSEMBLYMETADATA DESCRIPTOR.message_types_by_name['GeneDescriptors'] = _GENEDESCRIPTORS DESCRIPTOR.message_types_by_name['AnnotationForVirus'] = _ANNOTATIONFORVIRUS DESCRIPTOR.message_types_by_name['VirusDatasetRequest'] = _VIRUSDATASETREQUEST DESCRIPTOR.message_types_by_name['VirusDatasetFilter'] = _VIRUSDATASETFILTER DESCRIPTOR.message_types_by_name['VirusDataReportRequest'] = _VIRUSDATAREPORTREQUEST DESCRIPTOR.message_types_by_name['Sars2ProteinDatasetRequest'] = _SARS2PROTEINDATASETREQUEST DESCRIPTOR.message_types_by_name['VirusAvailabilityRequest'] = _VIRUSAVAILABILITYREQUEST DESCRIPTOR.message_types_by_name['VirusAvailability'] = _VIRUSAVAILABILITY DESCRIPTOR.message_types_by_name['DownloadSummary'] = _DOWNLOADSUMMARY DESCRIPTOR.message_types_by_name['TabularOutput'] = _TABULAROUTPUT DESCRIPTOR.message_types_by_name['ElementFlankConfig'] = _ELEMENTFLANKCONFIG DESCRIPTOR.message_types_by_name['RefGeneCatalogDatasetRequest'] = _REFGENECATALOGDATASETREQUEST DESCRIPTOR.message_types_by_name['MicroBiggeDatasetRequest'] = _MICROBIGGEDATASETREQUEST DESCRIPTOR.message_types_by_name['VersionReply'] = _VERSIONREPLY DESCRIPTOR.message_types_by_name['ProkaryoteGeneRequest'] = _PROKARYOTEGENEREQUEST DESCRIPTOR.message_types_by_name['SleepRequest'] = _SLEEPREQUEST DESCRIPTOR.message_types_by_name['SleepReply'] = _SLEEPREPLY DESCRIPTOR.message_types_by_name['TaxonomyNode'] = _TAXONOMYNODE DESCRIPTOR.message_types_by_name['TaxonomyMetadataRequest'] = _TAXONOMYMETADATAREQUEST DESCRIPTOR.message_types_by_name['TaxonomyMatch'] = _TAXONOMYMATCH DESCRIPTOR.message_types_by_name['TaxonomyMetadataResponse'] = _TAXONOMYMETADATARESPONSE DESCRIPTOR.message_types_by_name['TaxonomyFilteredSubtreeRequest'] = _TAXONOMYFILTEREDSUBTREEREQUEST DESCRIPTOR.message_types_by_name['TaxonomyFilteredSubtreeResponse'] = _TAXONOMYFILTEREDSUBTREERESPONSE DESCRIPTOR.message_types_by_name['DatasetRequest'] = _DATASETREQUEST DESCRIPTOR.enum_types_by_name['CountType'] = _COUNTTYPE DESCRIPTOR.enum_types_by_name['SortDirection'] = _SORTDIRECTION DESCRIPTOR.enum_types_by_name['Fasta'] = _FASTA DESCRIPTOR.enum_types_by_name['VirusTableField'] = _VIRUSTABLEFIELD DESCRIPTOR.enum_types_by_name['TableFormat'] = _TABLEFORMAT _sym_db.RegisterFileDescriptor(DESCRIPTOR) MethodPayloadRequest = _reflection.GeneratedProtocolMessageType('MethodPayloadRequest', (_message.Message,), { 'DESCRIPTOR' : _METHODPAYLOADREQUEST, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.MethodPayloadRequest) }) _sym_db.RegisterMessage(MethodPayloadRequest) AssemblyDatasetDescriptorsFilter = _reflection.GeneratedProtocolMessageType('AssemblyDatasetDescriptorsFilter', (_message.Message,), { 'DESCRIPTOR' : _ASSEMBLYDATASETDESCRIPTORSFILTER, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.AssemblyDatasetDescriptorsFilter) }) _sym_db.RegisterMessage(AssemblyDatasetDescriptorsFilter) Accessions = _reflection.GeneratedProtocolMessageType('Accessions', (_message.Message,), { 'DESCRIPTOR' : _ACCESSIONS, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.Accessions) }) _sym_db.RegisterMessage(Accessions) AssemblyMetadataRequest = _reflection.GeneratedProtocolMessageType('AssemblyMetadataRequest', (_message.Message,), { 'Bioprojects' : _reflection.GeneratedProtocolMessageType('Bioprojects', (_message.Message,), { 'DESCRIPTOR' : _ASSEMBLYMETADATAREQUEST_BIOPROJECTS, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.AssemblyMetadataRequest.Bioprojects) }) , 'DESCRIPTOR' : _ASSEMBLYMETADATAREQUEST, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.AssemblyMetadataRequest) }) _sym_db.RegisterMessage(AssemblyMetadataRequest) _sym_db.RegisterMessage(AssemblyMetadataRequest.Bioprojects) AssemblyDatasetDescriptorsRequest = _reflection.GeneratedProtocolMessageType('AssemblyDatasetDescriptorsRequest', (_message.Message,), { 'DESCRIPTOR' : _ASSEMBLYDATASETDESCRIPTORSREQUEST, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.AssemblyDatasetDescriptorsRequest) }) _sym_db.RegisterMessage(AssemblyDatasetDescriptorsRequest) AssemblyDatasetDescriptors = _reflection.GeneratedProtocolMessageType('AssemblyDatasetDescriptors', (_message.Message,), { 'DESCRIPTOR' : _ASSEMBLYDATASETDESCRIPTORS, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.AssemblyDatasetDescriptors) }) _sym_db.RegisterMessage(AssemblyDatasetDescriptors) BioProject = _reflection.GeneratedProtocolMessageType('BioProject', (_message.Message,), { 'DESCRIPTOR' : _BIOPROJECT, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.BioProject) }) _sym_db.RegisterMessage(BioProject) BioProjectLineage = _reflection.GeneratedProtocolMessageType('BioProjectLineage', (_message.Message,), { 'DESCRIPTOR' : _BIOPROJECTLINEAGE, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.BioProjectLineage) }) _sym_db.RegisterMessage(BioProjectLineage) AssemblyDatasetDescriptor = _reflection.GeneratedProtocolMessageType('AssemblyDatasetDescriptor', (_message.Message,), { 'Chromosome' : _reflection.GeneratedProtocolMessageType('Chromosome', (_message.Message,), { 'DESCRIPTOR' : _ASSEMBLYDATASETDESCRIPTOR_CHROMOSOME, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.AssemblyDatasetDescriptor.Chromosome) }) , 'DESCRIPTOR' : _ASSEMBLYDATASETDESCRIPTOR, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.AssemblyDatasetDescriptor) }) _sym_db.RegisterMessage(AssemblyDatasetDescriptor) _sym_db.RegisterMessage(AssemblyDatasetDescriptor.Chromosome) BuscoStat = _reflection.GeneratedProtocolMessageType('BuscoStat', (_message.Message,), { 'DESCRIPTOR' : _BUSCOSTAT, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.BuscoStat) }) _sym_db.RegisterMessage(BuscoStat) AnnotationForAssembly = _reflection.GeneratedProtocolMessageType('AnnotationForAssembly', (_message.Message,), { 'File' : _reflection.GeneratedProtocolMessageType('File', (_message.Message,), { 'DESCRIPTOR' : _ANNOTATIONFORASSEMBLY_FILE, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.AnnotationForAssembly.File) }) , 'DESCRIPTOR' : _ANNOTATIONFORASSEMBLY, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.AnnotationForAssembly) }) _sym_db.RegisterMessage(AnnotationForAssembly) _sym_db.RegisterMessage(AnnotationForAssembly.File) FeatureCounts = _reflection.GeneratedProtocolMessageType('FeatureCounts', (_message.Message,), { 'DESCRIPTOR' : _FEATURECOUNTS, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.FeatureCounts) }) _sym_db.RegisterMessage(FeatureCounts) GeneCounts = _reflection.GeneratedProtocolMessageType('GeneCounts', (_message.Message,), { 'DESCRIPTOR' : _GENECOUNTS, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.GeneCounts) }) _sym_db.RegisterMessage(GeneCounts) AssemblyDatasetRequest = _reflection.GeneratedProtocolMessageType('AssemblyDatasetRequest', (_message.Message,), { 'DESCRIPTOR' : _ASSEMBLYDATASETREQUEST, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.AssemblyDatasetRequest) }) _sym_db.RegisterMessage(AssemblyDatasetRequest) AssemblyDatasetAvailability = _reflection.GeneratedProtocolMessageType('AssemblyDatasetAvailability', (_message.Message,), { 'DESCRIPTOR' : _ASSEMBLYDATASETAVAILABILITY, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.AssemblyDatasetAvailability) }) _sym_db.RegisterMessage(AssemblyDatasetAvailability) TaxidRequest = _reflection.GeneratedProtocolMessageType('TaxidRequest', (_message.Message,), { 'DESCRIPTOR' : _TAXIDREQUEST, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.TaxidRequest) }) _sym_db.RegisterMessage(TaxidRequest) TaxidReply = _reflection.GeneratedProtocolMessageType('TaxidReply', (_message.Message,), { 'DESCRIPTOR' : _TAXIDREPLY, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.TaxidReply) }) _sym_db.RegisterMessage(TaxidReply) Organism = _reflection.GeneratedProtocolMessageType('Organism', (_message.Message,), { 'Counts' : _reflection.GeneratedProtocolMessageType('Counts', (_message.Message,), { 'DESCRIPTOR' : _ORGANISM_COUNTS, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.Organism.Counts) }) , 'CountByType' : _reflection.GeneratedProtocolMessageType('CountByType', (_message.Message,), { 'DESCRIPTOR' : _ORGANISM_COUNTBYTYPE, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.Organism.CountByType) }) , 'DESCRIPTOR' : _ORGANISM, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.Organism) }) _sym_db.RegisterMessage(Organism) _sym_db.RegisterMessage(Organism.Counts) _sym_db.RegisterMessage(Organism.CountByType) TaxTreeRequest = _reflection.GeneratedProtocolMessageType('TaxTreeRequest', (_message.Message,), { 'DESCRIPTOR' : _TAXTREEREQUEST, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.TaxTreeRequest) }) _sym_db.RegisterMessage(TaxTreeRequest) OrganismQueryRequest = _reflection.GeneratedProtocolMessageType('OrganismQueryRequest', (_message.Message,), { 'DESCRIPTOR' : _ORGANISMQUERYREQUEST, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.OrganismQueryRequest) }) _sym_db.RegisterMessage(OrganismQueryRequest) SciNameAndIds = _reflection.GeneratedProtocolMessageType('SciNameAndIds', (_message.Message,), { 'SciNameAndId' : _reflection.GeneratedProtocolMessageType('SciNameAndId', (_message.Message,), { 'DESCRIPTOR' : _SCINAMEANDIDS_SCINAMEANDID, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.SciNameAndIds.SciNameAndId) }) , 'DESCRIPTOR' : _SCINAMEANDIDS, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.SciNameAndIds) }) _sym_db.RegisterMessage(SciNameAndIds) _sym_db.RegisterMessage(SciNameAndIds.SciNameAndId) OrthologRequest = _reflection.GeneratedProtocolMessageType('OrthologRequest', (_message.Message,), { 'DESCRIPTOR' : _ORTHOLOGREQUEST, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.OrthologRequest) }) _sym_db.RegisterMessage(OrthologRequest) OrthologSet = _reflection.GeneratedProtocolMessageType('OrthologSet', (_message.Message,), { 'DESCRIPTOR' : _ORTHOLOGSET, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.OrthologSet) }) _sym_db.RegisterMessage(OrthologSet) GeneDatasetRequest = _reflection.GeneratedProtocolMessageType('GeneDatasetRequest', (_message.Message,), { 'SymbolsForTaxon' : _reflection.GeneratedProtocolMessageType('SymbolsForTaxon', (_message.Message,), { 'DESCRIPTOR' : _GENEDATASETREQUEST_SYMBOLSFORTAXON, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.GeneDatasetRequest.SymbolsForTaxon) }) , 'GeneIds' : _reflection.GeneratedProtocolMessageType('GeneIds', (_message.Message,), { 'DESCRIPTOR' : _GENEDATASETREQUEST_GENEIDS, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.GeneDatasetRequest.GeneIds) }) , 'Sort' : _reflection.GeneratedProtocolMessageType('Sort', (_message.Message,), { 'DESCRIPTOR' : _GENEDATASETREQUEST_SORT, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.GeneDatasetRequest.Sort) }) , 'DESCRIPTOR' : _GENEDATASETREQUEST, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.GeneDatasetRequest) }) _sym_db.RegisterMessage(GeneDatasetRequest) _sym_db.RegisterMessage(GeneDatasetRequest.SymbolsForTaxon) _sym_db.RegisterMessage(GeneDatasetRequest.GeneIds) _sym_db.RegisterMessage(GeneDatasetRequest.Sort) Error = _reflection.GeneratedProtocolMessageType('Error', (_message.Message,), { 'DESCRIPTOR' : _ERROR, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.Error) }) _sym_db.RegisterMessage(Error) Warning = _reflection.GeneratedProtocolMessageType('Warning', (_message.Message,), { 'ReplacedId' : _reflection.GeneratedProtocolMessageType('ReplacedId', (_message.Message,), { 'DESCRIPTOR' : _WARNING_REPLACEDID, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.Warning.ReplacedId) }) , 'DESCRIPTOR' : _WARNING, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.Warning) }) _sym_db.RegisterMessage(Warning) _sym_db.RegisterMessage(Warning.ReplacedId) Message = _reflection.GeneratedProtocolMessageType('Message', (_message.Message,), { 'DESCRIPTOR' : _MESSAGE, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.Message) }) _sym_db.RegisterMessage(Message) GeneMatch = _reflection.GeneratedProtocolMessageType('GeneMatch', (_message.Message,), { 'DESCRIPTOR' : _GENEMATCH, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.GeneMatch) }) _sym_db.RegisterMessage(GeneMatch) GeneMetadata = _reflection.GeneratedProtocolMessageType('GeneMetadata', (_message.Message,), { 'DESCRIPTOR' : _GENEMETADATA, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.GeneMetadata) }) _sym_db.RegisterMessage(GeneMetadata) AssemblyMatch = _reflection.GeneratedProtocolMessageType('AssemblyMatch', (_message.Message,), { 'DESCRIPTOR' : _ASSEMBLYMATCH, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.AssemblyMatch) }) _sym_db.RegisterMessage(AssemblyMatch) AssemblyMetadata = _reflection.GeneratedProtocolMessageType('AssemblyMetadata', (_message.Message,), { 'DESCRIPTOR' : _ASSEMBLYMETADATA, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.AssemblyMetadata) }) _sym_db.RegisterMessage(AssemblyMetadata) GeneDescriptors = _reflection.GeneratedProtocolMessageType('GeneDescriptors', (_message.Message,), { 'DESCRIPTOR' : _GENEDESCRIPTORS, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.GeneDescriptors) }) _sym_db.RegisterMessage(GeneDescriptors) AnnotationForVirus = _reflection.GeneratedProtocolMessageType('AnnotationForVirus', (_message.Message,), { 'DESCRIPTOR' : _ANNOTATIONFORVIRUS, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.AnnotationForVirus) }) _sym_db.RegisterMessage(AnnotationForVirus) VirusDatasetRequest = _reflection.GeneratedProtocolMessageType('VirusDatasetRequest', (_message.Message,), { 'DESCRIPTOR' : _VIRUSDATASETREQUEST, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.VirusDatasetRequest) }) _sym_db.RegisterMessage(VirusDatasetRequest) VirusDatasetFilter = _reflection.GeneratedProtocolMessageType('VirusDatasetFilter', (_message.Message,), { 'DESCRIPTOR' : _VIRUSDATASETFILTER, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.VirusDatasetFilter) }) _sym_db.RegisterMessage(VirusDatasetFilter) VirusDataReportRequest = _reflection.GeneratedProtocolMessageType('VirusDataReportRequest', (_message.Message,), { 'DESCRIPTOR' : _VIRUSDATAREPORTREQUEST, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.VirusDataReportRequest) }) _sym_db.RegisterMessage(VirusDataReportRequest) Sars2ProteinDatasetRequest = _reflection.GeneratedProtocolMessageType('Sars2ProteinDatasetRequest', (_message.Message,), { 'DESCRIPTOR' : _SARS2PROTEINDATASETREQUEST, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.Sars2ProteinDatasetRequest) }) _sym_db.RegisterMessage(Sars2ProteinDatasetRequest) VirusAvailabilityRequest = _reflection.GeneratedProtocolMessageType('VirusAvailabilityRequest', (_message.Message,), { 'DESCRIPTOR' : _VIRUSAVAILABILITYREQUEST, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.VirusAvailabilityRequest) }) _sym_db.RegisterMessage(VirusAvailabilityRequest) VirusAvailability = _reflection.GeneratedProtocolMessageType('VirusAvailability', (_message.Message,), { 'DESCRIPTOR' : _VIRUSAVAILABILITY, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.VirusAvailability) }) _sym_db.RegisterMessage(VirusAvailability) DownloadSummary = _reflection.GeneratedProtocolMessageType('DownloadSummary', (_message.Message,), { 'Hydrated' : _reflection.GeneratedProtocolMessageType('Hydrated', (_message.Message,), { 'DESCRIPTOR' : _DOWNLOADSUMMARY_HYDRATED, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.DownloadSummary.Hydrated) }) , 'Dehydrated' : _reflection.GeneratedProtocolMessageType('Dehydrated', (_message.Message,), { 'DESCRIPTOR' : _DOWNLOADSUMMARY_DEHYDRATED, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.DownloadSummary.Dehydrated) }) , 'FileSummary' : _reflection.GeneratedProtocolMessageType('FileSummary', (_message.Message,), { 'DESCRIPTOR' : _DOWNLOADSUMMARY_FILESUMMARY, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.DownloadSummary.FileSummary) }) , 'AvailableFiles' : _reflection.GeneratedProtocolMessageType('AvailableFiles', (_message.Message,), { 'DESCRIPTOR' : _DOWNLOADSUMMARY_AVAILABLEFILES, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.DownloadSummary.AvailableFiles) }) , 'DESCRIPTOR' : _DOWNLOADSUMMARY, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.DownloadSummary) }) _sym_db.RegisterMessage(DownloadSummary) _sym_db.RegisterMessage(DownloadSummary.Hydrated) _sym_db.RegisterMessage(DownloadSummary.Dehydrated) _sym_db.RegisterMessage(DownloadSummary.FileSummary) _sym_db.RegisterMessage(DownloadSummary.AvailableFiles) TabularOutput = _reflection.GeneratedProtocolMessageType('TabularOutput', (_message.Message,), { 'DESCRIPTOR' : _TABULAROUTPUT, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.TabularOutput) }) _sym_db.RegisterMessage(TabularOutput) ElementFlankConfig = _reflection.GeneratedProtocolMessageType('ElementFlankConfig', (_message.Message,), { 'DESCRIPTOR' : _ELEMENTFLANKCONFIG, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.ElementFlankConfig) }) _sym_db.RegisterMessage(ElementFlankConfig) RefGeneCatalogDatasetRequest = _reflection.GeneratedProtocolMessageType('RefGeneCatalogDatasetRequest', (_message.Message,), { 'DESCRIPTOR' : _REFGENECATALOGDATASETREQUEST, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.RefGeneCatalogDatasetRequest) }) _sym_db.RegisterMessage(RefGeneCatalogDatasetRequest) MicroBiggeDatasetRequest = _reflection.GeneratedProtocolMessageType('MicroBiggeDatasetRequest', (_message.Message,), { 'DESCRIPTOR' : _MICROBIGGEDATASETREQUEST, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.MicroBiggeDatasetRequest) }) _sym_db.RegisterMessage(MicroBiggeDatasetRequest) VersionReply = _reflection.GeneratedProtocolMessageType('VersionReply', (_message.Message,), { 'DESCRIPTOR' : _VERSIONREPLY, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.VersionReply) }) _sym_db.RegisterMessage(VersionReply) ProkaryoteGeneRequest = _reflection.GeneratedProtocolMessageType('ProkaryoteGeneRequest', (_message.Message,), { 'GeneFlankConfig' : _reflection.GeneratedProtocolMessageType('GeneFlankConfig', (_message.Message,), { 'DESCRIPTOR' : _PROKARYOTEGENEREQUEST_GENEFLANKCONFIG, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.ProkaryoteGeneRequest.GeneFlankConfig) }) , 'DESCRIPTOR' : _PROKARYOTEGENEREQUEST, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.ProkaryoteGeneRequest) }) _sym_db.RegisterMessage(ProkaryoteGeneRequest) _sym_db.RegisterMessage(ProkaryoteGeneRequest.GeneFlankConfig) SleepRequest = _reflection.GeneratedProtocolMessageType('SleepRequest', (_message.Message,), { 'DESCRIPTOR' : _SLEEPREQUEST, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.SleepRequest) }) _sym_db.RegisterMessage(SleepRequest) SleepReply = _reflection.GeneratedProtocolMessageType('SleepReply', (_message.Message,), { 'DESCRIPTOR' : _SLEEPREPLY, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.SleepReply) }) _sym_db.RegisterMessage(SleepReply) TaxonomyNode = _reflection.GeneratedProtocolMessageType('TaxonomyNode', (_message.Message,), { 'CountByType' : _reflection.GeneratedProtocolMessageType('CountByType', (_message.Message,), { 'DESCRIPTOR' : _TAXONOMYNODE_COUNTBYTYPE, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.TaxonomyNode.CountByType) }) , 'DESCRIPTOR' : _TAXONOMYNODE, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.TaxonomyNode) }) _sym_db.RegisterMessage(TaxonomyNode) _sym_db.RegisterMessage(TaxonomyNode.CountByType) TaxonomyMetadataRequest = _reflection.GeneratedProtocolMessageType('TaxonomyMetadataRequest', (_message.Message,), { 'DESCRIPTOR' : _TAXONOMYMETADATAREQUEST, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.TaxonomyMetadataRequest) }) _sym_db.RegisterMessage(TaxonomyMetadataRequest) TaxonomyMatch = _reflection.GeneratedProtocolMessageType('TaxonomyMatch', (_message.Message,), { 'DESCRIPTOR' : _TAXONOMYMATCH, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.TaxonomyMatch) }) _sym_db.RegisterMessage(TaxonomyMatch) TaxonomyMetadataResponse = _reflection.GeneratedProtocolMessageType('TaxonomyMetadataResponse', (_message.Message,), { 'DESCRIPTOR' : _TAXONOMYMETADATARESPONSE, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.TaxonomyMetadataResponse) }) _sym_db.RegisterMessage(TaxonomyMetadataResponse) TaxonomyFilteredSubtreeRequest = _reflection.GeneratedProtocolMessageType('TaxonomyFilteredSubtreeRequest', (_message.Message,), { 'DESCRIPTOR' : _TAXONOMYFILTEREDSUBTREEREQUEST, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.TaxonomyFilteredSubtreeRequest) }) _sym_db.RegisterMessage(TaxonomyFilteredSubtreeRequest) TaxonomyFilteredSubtreeResponse = _reflection.GeneratedProtocolMessageType('TaxonomyFilteredSubtreeResponse', (_message.Message,), { 'Edge' : _reflection.GeneratedProtocolMessageType('Edge', (_message.Message,), { 'DESCRIPTOR' : _TAXONOMYFILTEREDSUBTREERESPONSE_EDGE, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.TaxonomyFilteredSubtreeResponse.Edge) }) , 'EdgesEntry' : _reflection.GeneratedProtocolMessageType('EdgesEntry', (_message.Message,), { 'DESCRIPTOR' : _TAXONOMYFILTEREDSUBTREERESPONSE_EDGESENTRY, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.TaxonomyFilteredSubtreeResponse.EdgesEntry) }) , 'DESCRIPTOR' : _TAXONOMYFILTEREDSUBTREERESPONSE, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.TaxonomyFilteredSubtreeResponse) }) _sym_db.RegisterMessage(TaxonomyFilteredSubtreeResponse) _sym_db.RegisterMessage(TaxonomyFilteredSubtreeResponse.Edge) _sym_db.RegisterMessage(TaxonomyFilteredSubtreeResponse.EdgesEntry) DatasetRequest = _reflection.GeneratedProtocolMessageType('DatasetRequest', (_message.Message,), { 'DESCRIPTOR' : _DATASETREQUEST, '__module__' : 'ncbi.datasets.v1.datasets_pb2' # @@protoc_insertion_point(class_scope:ncbi.datasets.v1.DatasetRequest) }) _sym_db.RegisterMessage(DatasetRequest) DESCRIPTOR._options = None _ASSEMBLYDATASETDESCRIPTORSFILTER.fields_by_name['reference_only']._options = None _ASSEMBLYDATASETDESCRIPTORSFILTER.fields_by_name['refseq_only']._options = None _ASSEMBLYDATASETDESCRIPTORSFILTER.fields_by_name['assembly_source']._options = None _ASSEMBLYDATASETDESCRIPTORSFILTER.fields_by_name['has_annotation']._options = None _ASSEMBLYDATASETDESCRIPTORSFILTER.fields_by_name['exclude_paired_reports']._options = None _ASSEMBLYDATASETDESCRIPTORSFILTER.fields_by_name['exclude_atypical']._options = None _ASSEMBLYDATASETDESCRIPTORSFILTER.fields_by_name['assembly_version']._options = None _ASSEMBLYDATASETDESCRIPTORSFILTER.fields_by_name['assembly_level']._options = None _ASSEMBLYDATASETDESCRIPTORSFILTER.fields_by_name['first_release_date']._options = None _ASSEMBLYDATASETDESCRIPTORSFILTER.fields_by_name['last_release_date']._options = None _ASSEMBLYDATASETDESCRIPTORSFILTER.fields_by_name['search_text']._options = None _ACCESSIONS.fields_by_name['accessions']._options = None _ASSEMBLYMETADATAREQUEST_BIOPROJECTS.fields_by_name['accessions']._options = None _ASSEMBLYMETADATAREQUEST.fields_by_name['taxon']._options = None _ASSEMBLYMETADATAREQUEST.fields_by_name['tax_exact_match']._options = None _ASSEMBLYMETADATAREQUEST.fields_by_name['limit']._options = None _ASSEMBLYMETADATAREQUEST.fields_by_name['page_size']._options = None _ASSEMBLYMETADATAREQUEST._options = None _ASSEMBLYDATASETDESCRIPTORSREQUEST.fields_by_name['org_name']._options = None _ASSEMBLYDATASETDESCRIPTORSREQUEST.fields_by_name['cutoff']._options = None _ANNOTATIONFORASSEMBLY_TYPE._options = None _ANNOTATIONFORASSEMBLY_TYPE.values_by_name["GENOME_GB"]._options = None _ASSEMBLYDATASETREQUEST.fields_by_name['assembly_accessions']._options = None _ASSEMBLYDATASETREQUEST.fields_by_name['accessions']._options = None _ASSEMBLYDATASETREQUEST.fields_by_name['chromosomes']._options = None _ASSEMBLYDATASETREQUEST.fields_by_name['include_annotation']._options = None _ASSEMBLYDATASETREQUEST.fields_by_name['exclude_sequence']._options = None _ASSEMBLYDATASETREQUEST.fields_by_name['include_annotation_type']._options = None _ASSEMBLYDATASETREQUEST.fields_by_name['include_tsv']._options = None _ASSEMBLYDATASETREQUEST._options = None _ORGANISM.fields_by_name['assembly_count']._options = None _TAXTREEREQUEST.fields_by_name['tax_id']._options = None _TAXTREEREQUEST.fields_by_name['tax_token']._options = None _TAXTREEREQUEST.fields_by_name['taxon']._options = None _TAXTREEREQUEST.fields_by_name['children_only']._options = None _ORGANISMQUERYREQUEST.fields_by_name['organism_query']._options = None _ORGANISMQUERYREQUEST.fields_by_name['taxon_query']._options = None _ORGANISMQUERYREQUEST.fields_by_name['tax_rank_filter']._options = None _ORGANISMQUERYREQUEST.fields_by_name['tax_resource_filter']._options = None _ORTHOLOGREQUEST.fields_by_name['gene_id']._options = None _ORTHOLOGREQUEST.fields_by_name['taxon_filter']._options = None _GENEDATASETREQUEST_SYMBOLSFORTAXON.fields_by_name['symbols']._options = None _GENEDATASETREQUEST_SYMBOLSFORTAXON.fields_by_name['taxon']._options = None _GENEDATASETREQUEST.fields_by_name['gene_ids']._options = None _GENEDATASETREQUEST.fields_by_name['accessions']._options = None _GENEDATASETREQUEST.fields_by_name['taxon']._options = None _GENEDATASETREQUEST.fields_by_name['include_annotation_type']._options = None _GENEDATASETREQUEST._options = None _ERROR.fields_by_name['valid_identifiers']._options = None _GENEMATCH.fields_by_name['messages']._options = None _VIRUSDATASETREQUEST.fields_by_name['tax_id']._options = None _VIRUSDATASETREQUEST.fields_by_name['tax_name']._options = None _VIRUSDATASETREQUEST.fields_by_name['accessions']._options = None _VIRUSDATASETREQUEST.fields_by_name['taxon']._options = None _VIRUSDATASETREQUEST.fields_by_name['refseq_only']._options = None _VIRUSDATASETREQUEST.fields_by_name['annotated_only']._options = None _VIRUSDATASETREQUEST.fields_by_name['released_since']._options = None _VIRUSDATASETREQUEST.fields_by_name['updated_since']._options = None _VIRUSDATASETREQUEST.fields_by_name['host']._options = None _VIRUSDATASETREQUEST.fields_by_name['geo_location']._options = None _VIRUSDATASETREQUEST.fields_by_name['complete_only']._options = None _VIRUSDATASETREQUEST.fields_by_name['table_fields']._options = None _VIRUSDATASETREQUEST.fields_by_name['exclude_sequence']._options = None _VIRUSDATASETREQUEST.fields_by_name['include_annotation_type']._options = None _VIRUSDATASETREQUEST.fields_by_name['format']._options = None _VIRUSDATASETFILTER.fields_by_name['accessions']._options = None _VIRUSDATASETFILTER.fields_by_name['taxon']._options = None _VIRUSDATASETFILTER.fields_by_name['refseq_only']._options = None _VIRUSDATASETFILTER.fields_by_name['annotated_only']._options = None _VIRUSDATASETFILTER.fields_by_name['released_since']._options = None _VIRUSDATASETFILTER.fields_by_name['updated_since']._options = None _VIRUSDATASETFILTER.fields_by_name['host']._options = None _VIRUSDATASETFILTER.fields_by_name['geo_location']._options = None _VIRUSDATASETFILTER.fields_by_name['complete_only']._options = None _VIRUSDATAREPORTREQUEST.fields_by_name['table_fields']._options = None _VIRUSDATAREPORTREQUEST.fields_by_name['page_size']._options = None _VIRUSDATAREPORTREQUEST._options = None _SARS2PROTEINDATASETREQUEST.fields_by_name['proteins']._options = None _SARS2PROTEINDATASETREQUEST.fields_by_name['refseq_only']._options = None _SARS2PROTEINDATASETREQUEST.fields_by_name['annotated_only']._options = None _SARS2PROTEINDATASETREQUEST.fields_by_name['released_since']._options = None _SARS2PROTEINDATASETREQUEST.fields_by_name['updated_since']._options = None _SARS2PROTEINDATASETREQUEST.fields_by_name['host']._options = None _SARS2PROTEINDATASETREQUEST.fields_by_name['geo_location']._options = None _SARS2PROTEINDATASETREQUEST.fields_by_name['complete_only']._options = None _SARS2PROTEINDATASETREQUEST.fields_by_name['table_fields']._options = None _SARS2PROTEINDATASETREQUEST.fields_by_name['exclude_sequence']._options = None _SARS2PROTEINDATASETREQUEST.fields_by_name['include_annotation_type']._options = None _SARS2PROTEINDATASETREQUEST.fields_by_name['format']._options = None _VIRUSAVAILABILITYREQUEST.fields_by_name['accessions']._options = None _DOWNLOADSUMMARY.fields_by_name['assembly_count']._options = None _DOWNLOADSUMMARY.fields_by_name['errors']._options = None _REFGENECATALOGDATASETREQUEST.fields_by_name['files']._options = None _MICROBIGGEDATASETREQUEST.fields_by_name['files']._options = None _PROKARYOTEGENEREQUEST.fields_by_name['accessions']._options = None _PROKARYOTEGENEREQUEST.fields_by_name['include_annotation_type']._options = None _PROKARYOTEGENEREQUEST._options = None _TAXONOMYMETADATAREQUEST.fields_by_name['taxons']._options = None _TAXONOMYMETADATAREQUEST._options = None _TAXONOMYFILTEREDSUBTREEREQUEST.fields_by_name['taxons']._options = None _TAXONOMYFILTEREDSUBTREERESPONSE_EDGESENTRY._options = None # @@protoc_insertion_point(module_scope)