# This file created by conda-build 3.24.0
# meta.yaml template originally from:
# /opt/recipe, last modified Thu Apr  4 10:45:28 2024
# ------------------------------------------------

package:
  name: megahit
  version: 1.2.9
source:
  patches:
    - linux-aarch64-support-pr-368.patch
  sha256: 09026eb07cc4e2d24f58b0a13f7a826ae8bb73da735a47cb1cbe6e4693118852
  url: https://github.com/voutcn/megahit/archive/v1.2.9.tar.gz
build:
  number: '5'
  run_exports:
    - megahit >=1.2.9,<2.0a0
  string: h43eeafb_5
requirements:
  build:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - binutils_impl_linux-64 2.40 hf600244_0
    - binutils_linux-64 2.40 hdade7a5_3
    - bzip2 1.0.8 hd590300_5
    - c-ares 1.28.1 hd590300_0
    - ca-certificates 2024.2.2 hbcca054_0
    - cmake 3.29.0 hcfe8598_0
    - gcc_impl_linux-64 12.3.0 he2b93b0_5
    - gcc_linux-64 12.3.0 h6477408_3
    - gxx_impl_linux-64 12.3.0 he2b93b0_5
    - gxx_linux-64 12.3.0 h4a1b8e8_3
    - kernel-headers_linux-64 2.6.32 he073ed8_17
    - keyutils 1.6.1 h166bdaf_0
    - krb5 1.21.2 h659d440_0
    - ld_impl_linux-64 2.40 h41732ed_0
    - libcurl 8.7.1 hca28451_0
    - libedit 3.1.20191231 he28a2e2_2
    - libev 4.33 hd590300_2
    - libexpat 2.6.2 h59595ed_0
    - libgcc-devel_linux-64 12.3.0 h8bca6fd_105
    - libgcc-ng 13.2.0 h807b86a_5
    - libgomp 13.2.0 h807b86a_5
    - libnghttp2 1.58.0 h47da74e_1
    - libsanitizer 12.3.0 h0f45ef3_5
    - libssh2 1.11.0 h0841786_0
    - libstdcxx-devel_linux-64 12.3.0 h8bca6fd_105
    - libstdcxx-ng 13.2.0 h7e041cc_5
    - libuv 1.48.0 hd590300_0
    - libzlib 1.2.13 hd590300_5
    - make 4.3 hd18ef5c_1
    - ncurses 6.4.20240210 h59595ed_0
    - openssl 3.2.1 hd590300_1
    - rhash 1.4.4 hd590300_0
    - sysroot_linux-64 2.12 he073ed8_17
    - xz 5.2.6 h166bdaf_0
    - zstd 1.5.5 hfc55251_0
  host:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - libgcc-ng 13.2.0 h807b86a_5
    - libgomp 13.2.0 h807b86a_5
    - libstdcxx-ng 13.2.0 h7e041cc_5
    - libzlib 1.2.13 hd590300_5
    - zlib 1.2.13 hd590300_5
  run:
    - libgcc-ng >=12
    - libstdcxx-ng >=12
    - libzlib >=1.2.13,<1.3.0a0
    - python
    - zlib
test:
  commands:
    - megahit --test || (echo "error log:" && cat /tmp/megahit_test_*/log && exit
      1)
    - megahit --test --kmin-1pass || (echo "error log:" && cat /tmp/megahit_test_*/log
      && exit 1)
about:
  home: https://github.com/voutcn/megahit
  license: GPL-3.0
  license_family: GPL
  license_file: LICENSE
  summary: 'MEGAHIT: An ultra-fast single-node solution for large and complex

    metagenomics assembly via succinct de Bruijn graph'
extra:
  additional-platforms:
    - linux-aarch64
  copy_test_source_files: true
  final: true
  identifiers:
    - biotools:megahit
    - doi:10.1093/bioinformatics/btv033
