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share/easel/m4/ax_pthread.m4
share/easel/m4/esl_avx.m4
share/easel/m4/esl_avx512.m4
share/easel/m4/esl_cuda.m4
share/easel/m4/esl_neon.m4
share/easel/m4/esl_pic_flags.m4
share/easel/m4/esl_sse.m4
share/easel/m4/esl_sse4.m4
share/easel/m4/esl_vmx.m4
share/easel/makeTAGS.sh
share/easel/release-notes/RELEASE-0.46.md
share/easel/release-notes/RELEASE-0.47.md
share/easel/release-notes/RELEASE-0.48.md
share/easel/testsuite/Makefile
share/easel/testsuite/Makefile.in
share/easel/testsuite/coverage_report.pl
share/easel/testsuite/e2.sh
share/easel/testsuite/i1-degen-residues.pl
share/easel/testsuite/i2-ncbi-indices.pl
share/easel/testsuite/i3-blank-gf.pl
share/easel/testsuite/parse_test_results.py
share/easel/testsuite/testsuite.sqc
share/easel/testsuite/trna-5.stk
share/easel/testsuite/trna-ssdraw.ps
share/easel/testsuite/valgrind_report.pl
share/man/man1/alimask.1
share/man/man1/esl-afetch.1
share/man/man1/esl-alimanip.1
share/man/man1/esl-alimap.1
share/man/man1/esl-alimask.1
share/man/man1/esl-alimerge.1
share/man/man1/esl-alipid.1
share/man/man1/esl-alirev.1
share/man/man1/esl-alistat.1
share/man/man1/esl-compalign.1
share/man/man1/esl-compstruct.1
share/man/man1/esl-construct.1
share/man/man1/esl-histplot.1
share/man/man1/esl-mask.1
share/man/man1/esl-mixdchlet.1
share/man/man1/esl-reformat.1
share/man/man1/esl-selectn.1
share/man/man1/esl-seqrange.1
share/man/man1/esl-seqstat.1
share/man/man1/esl-sfetch.1
share/man/man1/esl-shuffle.1
share/man/man1/esl-ssdraw.1
share/man/man1/esl-translate.1
share/man/man1/esl-weight.1
share/man/man1/hmmalign.1
share/man/man1/hmmbuild.1
share/man/man1/hmmc2.1
share/man/man1/hmmconvert.1
share/man/man1/hmmemit.1
share/man/man1/hmmer.1
share/man/man1/hmmfetch.1
share/man/man1/hmmlogo.1
share/man/man1/hmmpgmd.1
share/man/man1/hmmpgmd_shard.1
share/man/man1/hmmpress.1
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share/man/man1/hmmsearch.1
share/man/man1/hmmsim.1
share/man/man1/hmmstat.1
share/man/man1/jackhmmer.1
share/man/man1/makehmmerdb.1
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share/man/man1/nhmmscan.1
share/man/man1/phmmer.1