# This file created by conda-build 3.21.8
# meta.yaml template originally from:
# /opt/recipe, last modified Sat Nov  5 12:57:44 2022
# ------------------------------------------------

package:
  name: bioconductor-summarizedexperiment
  version: 1.28.0
source:
  md5: ebe83ab2c9515946b79b94ecc9a04c3c
  url:
    - https://bioarchive.galaxyproject.org/SummarizedExperiment_1.28.0.tar.gz
    - https://bioconductor.org/packages/3.16/bioc/src/contrib/SummarizedExperiment_1.28.0.tar.gz
    - https://depot.galaxyproject.org/software/bioconductor-summarizedexperiment/bioconductor-summarizedexperiment_1.28.0_src_all.tar.gz
build:
  noarch: generic
  number: '0'
  rpaths:
    - lib/
    - lib/R/lib/
  string: r42hdfd78af_0
requirements:
  host:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - _r-mutex 1.0.1 anacondar_1
    - argcomplete 2.0.0 pyhd8ed1ab_0
    - binutils_impl_linux-64 2.39 h6ceecb4_0
    - bioconductor-biobase 2.58.0 r42hc0cfd56_0
    - bioconductor-biocgenerics 0.44.0 r42hdfd78af_0
    - bioconductor-data-packages 20221104 hdfd78af_2
    - bioconductor-delayedarray 0.24.0 r42hc0cfd56_0
    - bioconductor-genomeinfodb 1.34.1 r42hdfd78af_0
    - bioconductor-genomeinfodbdata 1.2.9 r42hdfd78af_0
    - bioconductor-genomicranges 1.50.0 r42hc0cfd56_0
    - bioconductor-iranges 2.32.0 r42hc0cfd56_0
    - bioconductor-matrixgenerics 1.10.0 r42hdfd78af_0
    - bioconductor-s4vectors 0.36.0 r42hc0cfd56_0
    - bioconductor-xvector 0.38.0 r42hc0cfd56_0
    - bioconductor-zlibbioc 1.44.0 r42hc0cfd56_0
    - bwidget 1.9.14 ha770c72_1
    - bzip2 1.0.8 h7f98852_4
    - c-ares 1.18.1 h7f98852_0
    - ca-certificates 2022.9.24 ha878542_0
    - cairo 1.16.0 ha61ee94_1014
    - curl 7.86.0 h2283fc2_1
    - expat 2.5.0 h27087fc_0
    - font-ttf-dejavu-sans-mono 2.37 hab24e00_0
    - font-ttf-inconsolata 3.000 h77eed37_0
    - font-ttf-source-code-pro 2.038 h77eed37_0
    - font-ttf-ubuntu 0.83 hab24e00_0
    - fontconfig 2.14.1 hc2a2eb6_0
    - fonts-conda-ecosystem 1 0
    - fonts-conda-forge 1 0
    - freetype 2.12.1 hca18f0e_0
    - fribidi 1.0.10 h36c2ea0_0
    - gcc_impl_linux-64 12.2.0 hcc96c02_19
    - gettext 0.21.1 h27087fc_0
    - gfortran_impl_linux-64 12.2.0 h55be85b_19
    - graphite2 1.3.13 h58526e2_1001
    - gsl 2.7 he838d99_0
    - gxx_impl_linux-64 12.2.0 hcc96c02_19
    - harfbuzz 5.3.0 h418a68e_0
    - icu 70.1 h27087fc_0
    - importlib-metadata 4.11.4 py310hff52083_0
    - importlib_metadata 4.11.4 hd8ed1ab_0
    - jpeg 9e h166bdaf_2
    - jq 1.6 h36c2ea0_1000
    - kernel-headers_linux-64 2.6.32 he073ed8_15
    - keyutils 1.6.1 h166bdaf_0
    - krb5 1.19.3 h08a2579_0
    - ld_impl_linux-64 2.39 hc81fddc_0
    - lerc 4.0.0 h27087fc_0
    - libblas 3.9.0 16_linux64_openblas
    - libcblas 3.9.0 16_linux64_openblas
    - libcurl 7.86.0 h2283fc2_1
    - libdeflate 1.14 h166bdaf_0
    - libedit 3.1.20191231 he28a2e2_2
    - libev 4.33 h516909a_1
    - libffi 3.4.2 h7f98852_5
    - libgcc-devel_linux-64 12.2.0 h3b97bd3_19
    - libgcc-ng 12.2.0 h65d4601_19
    - libgfortran-ng 12.2.0 h69a702a_19
    - libgfortran5 12.2.0 h337968e_19
    - libglib 2.74.1 h7a41b64_0
    - libgomp 12.2.0 h65d4601_19
    - libiconv 1.17 h166bdaf_0
    - liblapack 3.9.0 16_linux64_openblas
    - libnghttp2 1.47.0 hff17c54_1
    - libnsl 2.0.0 h7f98852_0
    - libopenblas 0.3.21 pthreads_h78a6416_3
    - libpng 1.6.38 h753d276_0
    - libsanitizer 12.2.0 h46fd767_19
    - libsqlite 3.39.4 h753d276_0
    - libssh2 1.10.0 hf14f497_3
    - libstdcxx-devel_linux-64 12.2.0 h3b97bd3_19
    - libstdcxx-ng 12.2.0 h46fd767_19
    - libtiff 4.4.0 h55922b4_4
    - libuuid 2.32.1 h7f98852_1000
    - libwebp-base 1.2.4 h166bdaf_0
    - libxcb 1.13 h7f98852_1004
    - libxml2 2.10.3 h7463322_0
    - libzlib 1.2.13 h166bdaf_4
    - make 4.3 hd18ef5c_1
    - ncurses 6.3 h27087fc_1
    - oniguruma 6.9.8 h166bdaf_0
    - openssl 3.0.7 h166bdaf_0
    - pango 1.50.11 h382ae3d_0
    - pcre2 10.37 hc3806b6_1
    - pip 22.3 pyhd8ed1ab_0
    - pixman 0.40.0 h36c2ea0_0
    - pthread-stubs 0.4 h36c2ea0_1001
    - python 3.10.6 ha86cf86_0_cpython
    - python_abi 3.10 2_cp310
    - pyyaml 6.0 py310h5764c6d_5
    - r-base 4.2.2 h15a6132_0
    - r-bitops 1.0_7 r42h06615bd_1
    - r-lattice 0.20_45 r42h06615bd_1
    - r-matrix 1.5_1 r42h5f7b363_0
    - r-matrixstats 0.62.0 r42h06615bd_1
    - r-rcurl 1.98_1.9 r42h06615bd_1
    - readline 8.1.2 h0f457ee_0
    - sed 4.8 he412f7d_0
    - setuptools 65.5.1 pyhd8ed1ab_0
    - sysroot_linux-64 2.12 he073ed8_15
    - tk 8.6.12 h27826a3_0
    - tktable 2.10 hb7b940f_3
    - toml 0.10.2 pyhd8ed1ab_0
    - tzdata 2022f h191b570_0
    - wheel 0.38.1 pyhd8ed1ab_0
    - xmltodict 0.13.0 pyhd8ed1ab_0
    - xorg-kbproto 1.0.7 h7f98852_1002
    - xorg-libice 1.0.10 h7f98852_0
    - xorg-libsm 1.2.3 hd9c2040_1000
    - xorg-libx11 1.7.2 h7f98852_0
    - xorg-libxau 1.0.9 h7f98852_0
    - xorg-libxdmcp 1.1.3 h7f98852_0
    - xorg-libxext 1.3.4 h7f98852_1
    - xorg-libxrender 0.9.10 h7f98852_1003
    - xorg-libxt 1.2.1 h7f98852_2
    - xorg-renderproto 0.11.1 h7f98852_1002
    - xorg-xextproto 7.3.0 h7f98852_1002
    - xorg-xproto 7.0.31 h7f98852_1007
    - xz 5.2.6 h166bdaf_0
    - yaml 0.2.5 h7f98852_2
    - yq 2.13.0 pyhd8ed1ab_0
    - zipp 3.10.0 pyhd8ed1ab_0
    - zlib 1.2.13 h166bdaf_4
    - zstd 1.5.2 h6239696_4
  run:
    - bioconductor-biobase >=2.58.0,<2.59.0
    - bioconductor-biocgenerics >=0.44.0,<0.45.0
    - bioconductor-delayedarray >=0.24.0,<0.25.0
    - bioconductor-genomeinfodb >=1.34.0,<1.35.0
    - bioconductor-genomicranges >=1.50.0,<1.51.0
    - bioconductor-iranges >=2.32.0,<2.33.0
    - bioconductor-matrixgenerics >=1.10.0,<1.11.0
    - bioconductor-s4vectors >=0.36.0,<0.37.0
    - r-base >=4.2,<4.3.0a0
    - r-matrix
test:
  commands:
    - $R -e "library('SummarizedExperiment')"
about:
  description: The SummarizedExperiment container contains one or more assays, each
    represented by a matrix-like object of numeric or other mode. The rows typically
    represent genomic ranges of interest and the columns represent samples.
  home: https://bioconductor.org/packages/3.16/bioc/html/SummarizedExperiment.html
  license: Artistic-2.0
  summary: SummarizedExperiment container
extra:
  copy_test_source_files: true
  final: true
  identifiers:
    - biotools:summarizedexperiment
    - doi:10.1038/nmeth.3252
