# This file created by conda-build 3.21.8
# meta.yaml template originally from:
# /opt/recipe, last modified Thu Nov 10 14:16:23 2022
# ------------------------------------------------

package:
  name: bioconductor-rtracklayer
  version: 1.58.0
source:
  md5: cc7175c537ed4a3007d2b34aa4b94078
  url:
    - https://bioarchive.galaxyproject.org/rtracklayer_1.58.0.tar.gz
    - https://bioconductor.org/packages/3.16/bioc/src/contrib/rtracklayer_1.58.0.tar.gz
    - https://depot.galaxyproject.org/software/bioconductor-rtracklayer/bioconductor-rtracklayer_1.58.0_src_all.tar.gz
build:
  number: '1'
  rpaths:
    - lib/
    - lib/R/lib/
  string: r42h171f361_1
requirements:
  build:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - autoconf 2.69 pl5321hd708f79_11
    - automake 1.16.5 pl5321ha770c72_0
    - binutils_impl_linux-64 2.39 h6ceecb4_0
    - binutils_linux-64 2.39 h5fc0e48_11
    - gcc_impl_linux-64 10.4.0 h5231bdf_19
    - gcc_linux-64 10.4.0 h9215b83_11
    - kernel-headers_linux-64 2.6.32 he073ed8_15
    - ld_impl_linux-64 2.39 hc81fddc_0
    - libgcc-devel_linux-64 10.4.0 hd38fd1e_19
    - libgcc-ng 12.2.0 h65d4601_19
    - libgomp 12.2.0 h65d4601_19
    - libnsl 2.0.0 h7f98852_0
    - libsanitizer 10.4.0 h5246dfb_19
    - libstdcxx-ng 12.2.0 h46fd767_19
    - m4 1.4.18 h516909a_1001
    - make 4.3 hd18ef5c_1
    - perl 5.32.1 2_h7f98852_perl5
    - sysroot_linux-64 2.12 he073ed8_15
  host:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - _r-mutex 1.0.1 anacondar_1
    - argcomplete 2.0.0 pyhd8ed1ab_0
    - binutils_impl_linux-64 2.39 h6ceecb4_0
    - bioconductor-biobase 2.58.0 r42hc0cfd56_0
    - bioconductor-biocgenerics 0.44.0 r42hdfd78af_0
    - bioconductor-biocio 1.8.0 r42hdfd78af_0
    - bioconductor-biocparallel 1.32.0 r42hc247a5b_0
    - bioconductor-biostrings 2.66.0 r42hc0cfd56_0
    - bioconductor-data-packages 20221110 hdfd78af_1
    - bioconductor-delayedarray 0.24.0 r42hc0cfd56_0
    - bioconductor-genomeinfodb 1.34.1 r42hdfd78af_0
    - bioconductor-genomeinfodbdata 1.2.9 r42hdfd78af_0
    - bioconductor-genomicalignments 1.34.0 r42hc0cfd56_0
    - bioconductor-genomicranges 1.50.0 r42hc0cfd56_0
    - bioconductor-iranges 2.32.0 r42hc0cfd56_0
    - bioconductor-matrixgenerics 1.10.0 r42hdfd78af_0
    - bioconductor-rhtslib 2.0.0 r42hc0cfd56_0
    - bioconductor-rsamtools 2.14.0 r42hc247a5b_0
    - bioconductor-s4vectors 0.36.0 r42hc0cfd56_0
    - bioconductor-summarizedexperiment 1.28.0 r42hdfd78af_0
    - bioconductor-xvector 0.38.0 r42hc0cfd56_0
    - bioconductor-zlibbioc 1.44.0 r42hc0cfd56_0
    - bwidget 1.9.14 ha770c72_1
    - bzip2 1.0.8 h7f98852_4
    - c-ares 1.18.1 h7f98852_0
    - ca-certificates 2022.9.24 ha878542_0
    - cairo 1.16.0 ha61ee94_1014
    - curl 7.86.0 h7bff187_1
    - expat 2.5.0 h27087fc_0
    - font-ttf-dejavu-sans-mono 2.37 hab24e00_0
    - font-ttf-inconsolata 3.000 h77eed37_0
    - font-ttf-source-code-pro 2.038 h77eed37_0
    - font-ttf-ubuntu 0.83 hab24e00_0
    - fontconfig 2.14.1 hc2a2eb6_0
    - fonts-conda-ecosystem 1 0
    - fonts-conda-forge 1 0
    - freetype 2.12.1 hca18f0e_0
    - fribidi 1.0.10 h36c2ea0_0
    - gcc_impl_linux-64 12.2.0 hcc96c02_19
    - gettext 0.21.1 h27087fc_0
    - gfortran_impl_linux-64 12.2.0 h55be85b_19
    - graphite2 1.3.13 h58526e2_1001
    - gsl 2.7 he838d99_0
    - gxx_impl_linux-64 12.2.0 hcc96c02_19
    - harfbuzz 5.3.0 h418a68e_0
    - icu 70.1 h27087fc_0
    - importlib-metadata 3.3.0 pyhd8ed1ab_1
    - importlib_metadata 3.3.0 hd8ed1ab_3
    - jpeg 9e h166bdaf_2
    - jq 1.6 h36c2ea0_1000
    - kernel-headers_linux-64 2.6.32 he073ed8_15
    - keyutils 1.6.1 h166bdaf_0
    - krb5 1.19.3 h3790be6_0
    - ld_impl_linux-64 2.39 hc81fddc_0
    - lerc 4.0.0 h27087fc_0
    - libblas 3.9.0 5_h92ddd45_netlib
    - libcblas 3.9.0 5_h92ddd45_netlib
    - libcurl 7.86.0 h7bff187_1
    - libdeflate 1.14 h166bdaf_0
    - libedit 3.1.20191231 he28a2e2_2
    - libev 4.33 h516909a_1
    - libffi 3.4.2 h7f98852_5
    - libgcc-devel_linux-64 12.2.0 h3b97bd3_19
    - libgcc-ng 12.2.0 h65d4601_19
    - libgfortran-ng 12.2.0 h69a702a_19
    - libgfortran5 12.2.0 h337968e_19
    - libglib 2.74.1 h606061b_1
    - libgomp 12.2.0 h65d4601_19
    - libiconv 1.17 h166bdaf_0
    - liblapack 3.9.0 5_h92ddd45_netlib
    - libnghttp2 1.47.0 hdcd2b5c_1
    - libnsl 2.0.0 h7f98852_0
    - libpng 1.6.38 h753d276_0
    - libsanitizer 12.2.0 h46fd767_19
    - libsqlite 3.39.4 h753d276_0
    - libssh2 1.10.0 haa6b8db_3
    - libstdcxx-devel_linux-64 12.2.0 h3b97bd3_19
    - libstdcxx-ng 12.2.0 h46fd767_19
    - libtiff 4.4.0 h55922b4_4
    - libuuid 2.32.1 h7f98852_1000
    - libwebp-base 1.2.4 h166bdaf_0
    - libxcb 1.13 h7f98852_1004
    - libxml2 2.10.3 h7463322_0
    - libzlib 1.2.13 h166bdaf_4
    - make 4.3 hd18ef5c_1
    - ncurses 6.3 h27087fc_1
    - oniguruma 6.9.8 h166bdaf_0
    - openssl 1.1.1s h166bdaf_0
    - pango 1.50.11 h382ae3d_0
    - pcre2 10.40 hc3806b6_0
    - pip 22.3.1 pyhd8ed1ab_0
    - pixman 0.40.0 h36c2ea0_0
    - pthread-stubs 0.4 h36c2ea0_1001
    - python 3.11.0 h582c2e5_0_cpython
    - python_abi 3.11 2_cp311
    - pyyaml 6.0 py311hd4cff14_5
    - r-base 4.2.2 hb87df5d_1
    - r-bh 1.78.0_0 r42hc72bb7e_1
    - r-bitops 1.0_7 r42h06615bd_1
    - r-codetools 0.2_18 r42hc72bb7e_1
    - r-cpp11 0.4.3 r42hc72bb7e_0
    - r-crayon 1.5.2 r42hc72bb7e_1
    - r-formatr 1.12 r42hc72bb7e_1
    - r-futile.logger 1.4.3 r42hc72bb7e_1004
    - r-futile.options 1.0.1 r42hc72bb7e_1003
    - r-lambda.r 1.2.4 r42hc72bb7e_2
    - r-lattice 0.20_45 r42h06615bd_1
    - r-matrix 1.5_1 r42h5f7b363_0
    - r-matrixstats 0.62.0 r42h06615bd_1
    - r-rcurl 1.98_1.9 r42h06615bd_1
    - r-restfulr 0.0.15 r42h73dbb54_1
    - r-rjson 0.2.21 r42h7525677_2
    - r-snow 0.4_4 r42hc72bb7e_1
    - r-xml 3.99_0.12 r42hed7f998_0
    - r-yaml 2.3.6 r42h06615bd_0
    - readline 8.1.2 h0f457ee_0
    - sed 4.8 he412f7d_0
    - setuptools 65.5.1 pyhd8ed1ab_0
    - sysroot_linux-64 2.12 he073ed8_15
    - tk 8.6.12 h27826a3_0
    - tktable 2.10 hb7b940f_3
    - toml 0.10.2 pyhd8ed1ab_0
    - typing_extensions 4.4.0 pyha770c72_0
    - tzdata 2022f h191b570_0
    - wheel 0.38.4 pyhd8ed1ab_0
    - xmltodict 0.13.0 pyhd8ed1ab_0
    - xorg-kbproto 1.0.7 h7f98852_1002
    - xorg-libice 1.0.10 h7f98852_0
    - xorg-libsm 1.2.3 hd9c2040_1000
    - xorg-libx11 1.7.2 h7f98852_0
    - xorg-libxau 1.0.9 h7f98852_0
    - xorg-libxdmcp 1.1.3 h7f98852_0
    - xorg-libxext 1.3.4 h7f98852_1
    - xorg-libxrender 0.9.10 h7f98852_1003
    - xorg-libxt 1.2.1 h7f98852_2
    - xorg-renderproto 0.11.1 h7f98852_1002
    - xorg-xextproto 7.3.0 h7f98852_1002
    - xorg-xproto 7.0.31 h7f98852_1007
    - xz 5.2.6 h166bdaf_0
    - yaml 0.2.5 h7f98852_2
    - yq 2.13.0 pyhd8ed1ab_0
    - zipp 3.10.0 pyhd8ed1ab_0
    - zlib 1.2.13 h166bdaf_4
    - zstd 1.5.2 h6239696_4
  run:
    - bioconductor-biocgenerics >=0.44.0,<0.45.0
    - bioconductor-biocio >=1.8.0,<1.9.0
    - bioconductor-biostrings >=2.66.0,<2.67.0
    - bioconductor-genomeinfodb >=1.34.0,<1.35.0
    - bioconductor-genomicalignments >=1.34.0,<1.35.0
    - bioconductor-genomicranges >=1.50.0,<1.51.0
    - bioconductor-iranges >=2.32.0,<2.33.0
    - bioconductor-rsamtools >=2.14.0,<2.15.0
    - bioconductor-s4vectors >=0.36.0,<0.37.0
    - bioconductor-xvector >=0.38.0,<0.39.0
    - bioconductor-zlibbioc >=1.44.0,<1.45.0
    - libblas >=3.9.0,<4.0a0
    - libgcc-ng >=12
    - liblapack >=3.9.0,<4.0a0
    - openssl >=1.1.1s,<1.1.2a
    - r-base >=4.2,<4.3.0a0
    - r-rcurl >=1.4-2
    - r-restfulr >=0.0.13
    - r-xml >=1.98-0
test:
  commands:
    - $R -e "library('rtracklayer')"
about:
  description: Extensible framework for interacting with multiple genome browsers
    (currently UCSC built-in) and manipulating annotation tracks in various formats
    (currently GFF, BED, bedGraph, BED15, WIG, BigWig and 2bit built-in). The user
    may export/import tracks to/from the supported browsers, as well as query and
    modify the browser state, such as the current viewport.
  home: https://bioconductor.org/packages/3.16/bioc/html/rtracklayer.html
  license: Artistic-2.0 + file LICENSE
  license_file: LICENSE
  summary: R interface to genome annotation files and the UCSC genome browser
extra:
  copy_test_source_files: true
  final: true
  identifiers:
    - biotools:rtracklayer
