# This file created by conda-build 3.21.8
# meta.yaml template originally from:
# /opt/recipe, last modified Sun Nov  6 22:34:27 2022
# ------------------------------------------------

package:
  name: bioconductor-mia
  version: 1.6.0
source:
  md5: addf1abe62527c86a77e7dce098c8f4d
  url:
    - https://bioarchive.galaxyproject.org/mia_1.6.0.tar.gz
    - https://bioconductor.org/packages/3.16/bioc/src/contrib/mia_1.6.0.tar.gz
    - https://depot.galaxyproject.org/software/bioconductor-mia/bioconductor-mia_1.6.0_src_all.tar.gz
build:
  noarch: generic
  number: '0'
  rpaths:
    - lib/
    - lib/R/lib/
  string: r42hdfd78af_0
requirements:
  host:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - _r-mutex 1.0.1 anacondar_1
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    - libgfortran-ng 12.2.0 h69a702a_19
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    - libglib 2.74.1 h606061b_1
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    - liblapack 3.9.0 16_linux64_openblas
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    - pthread-stubs 0.4 h36c2ea0_1001
    - python 3.10.6 ha86cf86_0_cpython
    - python_abi 3.10 2_cp310
    - pyyaml 6.0 py310h5764c6d_5
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    - r-dplyr 1.0.10 r42h7525677_1
    - r-dqrng 0.3.0 r42h7525677_1
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    - r-evaluate 0.17 r42hc72bb7e_1
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    - r-fs 1.5.2 r42h7525677_2
    - r-futile.logger 1.4.3 r42hc72bb7e_1004
    - r-futile.options 1.0.1 r42hc72bb7e_1003
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    - r-lambda.r 1.2.4 r42hc72bb7e_2
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    - r-munsell 0.5.0 r42hc72bb7e_1005
    - r-nlme 3.1_160 r42h8da6f51_0
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    - r-plyr 1.8.7 r42h7525677_1
    - r-png 0.1_7 r42h06615bd_1006
    - r-praise 1.0.0 r42hc72bb7e_1006
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    - r-ps 1.7.2 r42h06615bd_0
    - r-purrr 0.3.5 r42h06615bd_1
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    - r-rcpp 1.0.9 r42h7525677_2
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    - r-rcurl 1.98_1.9 r42h06615bd_1
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    - r-viridislite 0.4.1 r42hc72bb7e_1
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    - setuptools 65.5.1 pyhd8ed1ab_0
    - sysroot_linux-64 2.12 he073ed8_15
    - tk 8.6.12 h27826a3_0
    - tktable 2.10 hb7b940f_3
    - toml 0.10.2 pyhd8ed1ab_0
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    - wheel 0.38.2 pyhd8ed1ab_0
    - xmltodict 0.13.0 pyhd8ed1ab_0
    - xorg-kbproto 1.0.7 h7f98852_1002
    - xorg-libice 1.0.10 h7f98852_0
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    - xorg-libxrender 0.9.10 h7f98852_1003
    - xorg-libxt 1.2.1 h7f98852_2
    - xorg-renderproto 0.11.1 h7f98852_1002
    - xorg-xextproto 7.3.0 h7f98852_1002
    - xorg-xproto 7.0.31 h7f98852_1007
    - xz 5.2.6 h166bdaf_0
    - yaml 0.2.5 h7f98852_2
    - yq 2.13.0 pyhd8ed1ab_0
    - zipp 3.10.0 pyhd8ed1ab_0
    - zlib 1.2.13 h166bdaf_4
    - zstd 1.5.2 h6239696_4
  run:
    - bioconductor-biocgenerics >=0.44.0,<0.45.0
    - bioconductor-biocparallel >=1.32.0,<1.33.0
    - bioconductor-biostrings >=2.66.0,<2.67.0
    - bioconductor-decipher >=2.26.0,<2.27.0
    - bioconductor-decontam >=1.18.0,<1.19.0
    - bioconductor-delayedarray >=0.24.0,<0.25.0
    - bioconductor-delayedmatrixstats >=1.20.0,<1.21.0
    - bioconductor-dirichletmultinomial >=1.40.0,<1.41.0
    - bioconductor-iranges >=2.32.0,<2.33.0
    - bioconductor-multiassayexperiment >=1.24.0,<1.25.0
    - bioconductor-s4vectors >=0.36.0,<0.37.0
    - bioconductor-scater >=1.26.0,<1.27.0
    - bioconductor-scuttle >=1.8.0,<1.9.0
    - bioconductor-singlecellexperiment >=1.20.0,<1.21.0
    - bioconductor-summarizedexperiment >=1.28.0,<1.29.0
    - bioconductor-treesummarizedexperiment >=2.6.0,<2.7.0
    - r-ape
    - r-base >=4.2,<4.3.0a0
    - r-dplyr
    - r-mass
    - r-rlang
    - r-tibble
    - r-tidyr
    - r-vegan
test:
  commands:
    - $R -e "library('mia')"
about:
  description: mia implements tools for microbiome analysis based on the SummarizedExperiment,
    SingleCellExperiment and TreeSummarizedExperiment infrastructure. Data wrangling
    and analysis in the context of taxonomic data is the main scope. Additional functions
    for common task are implemented such as community indices calculation and summarization.
  home: https://bioconductor.org/packages/3.16/bioc/html/mia.html
  license: Artistic-2.0 | file LICENSE
  license_file: LICENSE
  summary: Microbiome analysis
extra:
  copy_test_source_files: true
  final: true
