| Name | Last modified | Size | Description | |
|---|---|---|---|---|
| Parent Directory | - | |||
| HMM.c | 2023-04-01 17:14 | 18K | ||
| HMM.c.pysam.c | 2023-04-01 17:14 | 18K | ||
| HMM.h | 2023-04-01 17:14 | 4.9K | ||
| LICENSE | 2023-04-01 17:14 | 39K | ||
| README | 2023-04-01 17:14 | 2.1K | ||
| abuf.c | 2023-04-01 17:14 | 31K | ||
| abuf.c.pysam.c | 2023-04-01 17:14 | 31K | ||
| abuf.h | 2023-04-01 17:14 | 2.5K | ||
| bam2bcf.c | 2023-04-01 17:14 | 46K | ||
| bam2bcf.c.pysam.c | 2023-04-01 17:14 | 46K | ||
| bam2bcf.h | 2023-04-01 17:14 | 7.9K | ||
| bam2bcf_iaux.c | 2023-04-01 17:14 | 28K | ||
| bam2bcf_iaux.c.pysam.c | 2023-04-01 17:14 | 28K | ||
| bam2bcf_indel.c | 2023-04-01 17:14 | 34K | ||
| bam2bcf_indel.c.pysam.c | 2023-04-01 17:14 | 34K | ||
| bam_sample.c | 2023-04-01 17:14 | 13K | ||
| bam_sample.c.pysam.c | 2023-04-01 17:14 | 13K | ||
| bam_sample.h | 2023-04-01 17:14 | 2.0K | ||
| bcftools.h | 2023-04-01 17:14 | 5.0K | ||
| bcftools.pysam.c | 2023-04-01 17:14 | 1.6K | ||
| bcftools.pysam.h | 2023-04-01 17:14 | 1.8K | ||
| bin.c | 2023-04-01 17:14 | 3.4K | ||
| bin.c.pysam.c | 2023-04-01 17:14 | 3.4K | ||
| bin.h | 2023-04-01 17:14 | 2.1K | ||
| call.h | 2023-04-01 17:14 | 5.2K | ||
| ccall.c | 2023-04-01 17:14 | 13K | ||
| ccall.c.pysam.c | 2023-04-01 17:14 | 13K | ||
| cigar_state.h | 2023-04-01 17:14 | 6.2K | ||
| cols.c | 2023-04-01 17:14 | 3.3K | ||
| cols.c.pysam.c | 2023-04-01 17:14 | 3.3K | ||
| cols.h | 2023-04-01 17:14 | 1.8K | ||
| config.h | 2023-04-06 23:29 | 77 | ||
| consensus.c | 2023-04-01 17:14 | 49K | ||
| consensus.c.pysam.c | 2023-04-01 17:14 | 49K | ||
| convert.c | 2023-04-01 17:14 | 64K | ||
| convert.c.pysam.c | 2023-04-01 17:14 | 64K | ||
| convert.h | 2023-04-01 17:14 | 1.8K | ||
| csq.c | 2023-04-01 17:14 | 177K | ||
| csq.c.pysam.c | 2023-04-01 17:14 | 177K | ||
| dbuf.h | 2023-04-01 17:14 | 1.8K | ||
| dist.c | 2023-04-01 17:14 | 3.3K | ||
| dist.c.pysam.c | 2023-04-01 17:14 | 3.4K | ||
| dist.h | 2023-04-01 17:14 | 2.8K | ||
| em.c | 2023-04-01 17:14 | 8.7K | ||
| em.c.pysam.c | 2023-04-01 17:14 | 8.8K | ||
| extsort.c | 2023-04-01 17:14 | 7.8K | ||
| extsort.c.pysam.c | 2023-04-01 17:14 | 7.8K | ||
| extsort.h | 2023-04-01 17:14 | 2.1K | ||
| filter.c | 2023-04-01 17:14 | 142K | ||
| filter.c.pysam.c | 2023-04-01 17:14 | 142K | ||
| filter.h | 2023-04-01 17:14 | 2.9K | ||
| gvcf.c | 2023-04-01 17:14 | 7.9K | ||
| gvcf.c.pysam.c | 2023-04-01 17:14 | 8.0K | ||
| gvcf.h | 2023-04-01 17:14 | 1.5K | ||
| hclust.c | 2023-04-01 17:14 | 12K | ||
| hclust.c.pysam.c | 2023-04-01 17:14 | 13K | ||
| hclust.h | 2023-04-01 17:14 | 2.7K | ||
| hex.h | 2023-04-01 17:14 | 2.9K | ||
| khash_str2str.h | 2023-04-01 17:14 | 3.1K | ||
| kheap.h | 2023-04-01 17:14 | 7.5K | ||
| kmin.c | 2023-04-01 17:14 | 7.1K | ||
| kmin.c.pysam.c | 2023-04-01 17:14 | 7.1K | ||
| kmin.h | 2023-04-01 17:14 | 1.6K | ||
| main.c | 2023-04-01 17:14 | 9.7K | ||
| main.c.pysam.c | 2023-04-01 17:14 | 9.9K | ||
| mcall.c | 2023-04-01 17:14 | 63K | ||
| mcall.c.pysam.c | 2023-04-01 17:14 | 64K | ||
| mpileup.c | 2023-04-01 17:14 | 73K | ||
| mpileup.c.pysam.c | 2023-04-01 17:14 | 73K | ||
| mw.h | 2023-04-01 17:14 | 61K | ||
| ploidy.c | 2023-04-01 17:14 | 7.9K | ||
| ploidy.c.pysam.c | 2023-04-01 17:14 | 8.0K | ||
| ploidy.h | 2023-04-01 17:14 | 4.3K | ||
| prob1.c | 2023-04-01 17:14 | 20K | ||
| prob1.c.pysam.c | 2023-04-01 17:14 | 20K | ||
| prob1.h | 2023-04-01 17:14 | 3.5K | ||
| rbuf.h | 2023-04-01 17:14 | 7.4K | ||
| read_consensus.c | 2023-04-01 17:14 | 29K | ||
| read_consensus.c.pysam.c | 2023-04-01 17:14 | 29K | ||
| read_consensus.h | 2023-04-01 17:14 | 2.3K | ||
| regidx.c | 2023-04-01 17:14 | 18K | ||
| regidx.c.pysam.c | 2023-04-01 17:14 | 18K | ||
| regidx.h | 2023-04-01 17:14 | 8.5K | ||
| reheader.c | 2023-04-01 17:14 | 27K | ||
| reheader.c.pysam.c | 2023-04-01 17:14 | 27K | ||
| smpl_ilist.c | 2023-04-01 17:14 | 5.1K | ||
| smpl_ilist.c.pysam.c | 2023-04-01 17:14 | 5.2K | ||
| smpl_ilist.h | 2023-04-01 17:14 | 2.2K | ||
| str_finder.c | 2023-04-01 17:14 | 7.4K | ||
| str_finder.c.pysam.c | 2023-04-01 17:14 | 7.4K | ||
| str_finder.h | 2023-04-01 17:14 | 2.2K | ||
| tabix.c | 2023-04-01 17:14 | 5.6K | ||
| tabix.c.pysam.c | 2023-04-01 17:14 | 5.7K | ||
| tsv2vcf.c | 2023-04-01 17:14 | 3.8K | ||
| tsv2vcf.c.pysam.c | 2023-04-01 17:14 | 3.9K | ||
| tsv2vcf.h | 2023-04-01 17:14 | 2.7K | ||
| utlist.h | 2023-04-01 17:14 | 55K | ||
| variantkey.h | 2023-04-01 17:14 | 20K | ||
| vcfannotate.c | 2023-04-01 17:14 | 152K | ||
| vcfannotate.c.pysam.c | 2023-04-01 17:14 | 153K | ||
| vcfbuf.c | 2023-04-01 17:14 | 17K | ||
| vcfbuf.c.pysam.c | 2023-04-01 17:14 | 17K | ||
| vcfbuf.h | 2023-04-01 17:14 | 4.2K | ||
| vcfcall.c | 2023-04-01 17:14 | 47K | ||
| vcfcall.c.pysam.c | 2023-04-01 17:14 | 48K | ||
| vcfcnv.c | 2023-04-01 17:14 | 58K | ||
| vcfcnv.c.pysam.c | 2023-04-01 17:14 | 58K | ||
| vcfconcat.c | 2023-04-01 17:14 | 48K | ||
| vcfconcat.c.pysam.c | 2023-04-01 17:14 | 48K | ||
| vcfconvert.c | 2023-04-01 17:14 | 68K | ||
| vcfconvert.c.pysam.c | 2023-04-01 17:14 | 69K | ||
| vcffilter.c | 2023-04-01 17:14 | 30K | ||
| vcffilter.c.pysam.c | 2023-04-01 17:14 | 30K | ||
| vcfgtcheck.c | 2023-04-01 17:14 | 52K | ||
| vcfgtcheck.c.pysam.c | 2023-04-01 17:14 | 53K | ||
| vcfhead.c | 2023-04-01 17:14 | 4.0K | ||
| vcfhead.c.pysam.c | 2023-04-01 17:14 | 4.1K | ||
| vcfindex.c | 2023-04-01 17:14 | 12K | ||
| vcfindex.c.pysam.c | 2023-04-01 17:14 | 12K | ||
| vcfisec.c | 2023-04-01 17:14 | 28K | ||
| vcfisec.c.pysam.c | 2023-04-01 17:14 | 28K | ||
| vcfmerge.c | 2023-04-01 17:14 | 131K | ||
| vcfmerge.c.pysam.c | 2023-04-01 17:14 | 132K | ||
| vcfnorm.c | 2023-04-01 17:14 | 95K | ||
| vcfnorm.c.pysam.c | 2023-04-01 17:14 | 95K | ||
| vcfplugin.c | 2023-04-01 17:14 | 27K | ||
| vcfplugin.c.pysam.c | 2023-04-01 17:14 | 28K | ||
| vcfquery.c | 2023-04-01 17:14 | 18K | ||
| vcfquery.c.pysam.c | 2023-04-01 17:14 | 18K | ||
| vcfroh.c | 2023-04-01 17:14 | 50K | ||
| vcfroh.c.pysam.c | 2023-04-01 17:14 | 50K | ||
| vcfsom.c | 2023-04-01 17:14 | 24K | ||
| vcfsom.c.pysam.c | 2023-04-01 17:14 | 24K | ||
| vcfsort.c | 2023-04-01 17:14 | 14K | ||
| vcfsort.c.pysam.c | 2023-04-01 17:14 | 15K | ||
| vcfstats.c | 2023-04-01 17:14 | 79K | ||
| vcfstats.c.pysam.c | 2023-04-01 17:14 | 82K | ||
| vcfview.c | 2023-04-01 17:14 | 38K | ||
| vcfview.c.pysam.c | 2023-04-01 17:14 | 38K | ||
| vcmp.c | 2023-04-01 17:14 | 4.4K | ||
| vcmp.c.pysam.c | 2023-04-01 17:14 | 4.5K | ||
| vcmp.h | 2023-04-01 17:14 | 2.4K | ||
| version.c | 2023-04-01 17:14 | 3.9K | ||
| version.c.pysam.c | 2023-04-01 17:14 | 4.0K | ||
| version.sh | 2023-04-01 17:14 | 1.5K | ||