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![]() | Parent Directory | - | ||
![]() | 2to3 | 2024-06-05 10:04 | 153 | |
![]() | 2to3-3.8 | 2024-06-05 10:04 | 153 | |
![]() | AllocateEvidence | 2023-05-30 17:09 | 1.6K | |
![]() | AnnotateInexactHomology | 2023-05-30 17:09 | 1.6K | |
![]() | AnnotateInexactHomologyBedpe | 2023-05-30 17:09 | 1.6K | |
![]() | AnnotateInsertedSequence | 2023-05-30 17:09 | 1.6K | |
![]() | AnnotateReferenceCoverage | 2023-05-30 17:09 | 1.6K | |
![]() | AnnotateVariants | 2023-05-30 17:09 | 1.6K | |
![]() | AnnotateVariantsKraken | 2023-05-30 17:09 | 1.6K | |
![]() | AnnotateVariantsRepeatMasker | 2023-05-30 17:09 | 1.6K | |
![]() | AssembleBreakends | 2023-05-30 17:09 | 1.6K | |
![]() | CallVariants | 2023-05-30 17:09 | 1.6K | |
![]() | CollectCigarMetrics | 2023-05-30 17:09 | 1.6K | |
![]() | CollectFragmentGCMetrics | 2023-05-30 17:09 | 1.6K | |
![]() | CollectGridssMetrics | 2023-05-30 17:09 | 1.6K | |
![]() | CollectGridssMetricsAndExtractSVReads | 2023-05-30 17:09 | 1.6K | |
![]() | CollectIdsvMetrics | 2023-05-30 17:09 | 1.6K | |
![]() | CollectMapqMetrics | 2023-05-30 17:09 | 1.6K | |
![]() | CollectStructuralVariantReadMetrics | 2023-05-30 17:09 | 1.6K | |
![]() | CollectTagMetrics | 2023-05-30 17:09 | 1.6K | |
![]() | ComputeSamTags | 2023-05-30 17:09 | 1.6K | |
![]() | DupMasker | 2024-06-05 10:04 | 38K | |
![]() | ExtractBestViralReference | 2023-05-30 17:09 | 1.6K | |
![]() | ExtractFragmentsToFastq | 2023-05-30 17:09 | 1.6K | |
![]() | ExtractSVReads | 2023-05-30 17:09 | 1.6K | |
![]() | GeneratePonBedpe | 2023-05-30 17:09 | 1.6K | |
![]() | IdentifyVariants | 2023-05-30 17:09 | 1.6K | |
![]() | IdentifyViralTaxa | 2023-05-30 17:09 | 1.6K | |
![]() | InsertedSequencesToFasta | 2023-05-30 17:09 | 1.6K | |
![]() | PF00225_full.blocks.txt | 2022-09-23 13:06 | 9.5M | |
![]() | PF00225_seed.blocks.txt | 2022-09-23 13:06 | 49K | |
![]() | PrepareReference | 2023-05-30 17:09 | 1.6K | |
![]() | PreprocessForBreakendAssembly | 2023-05-30 17:09 | 1.6K | |
![]() | ProcessRepeats | 2024-06-05 10:04 | 347K | |
![]() | R | 2024-06-05 10:04 | 9.3K | |
![]() | README | 2021-10-30 11:50 | 40K | |
![]() | README.autoAug | 2022-09-23 13:06 | 12K | |
![]() | RM2Bed.py | 2023-10-19 14:13 | 32K | |
![]() | RepeatMasker | 2024-06-05 10:04 | 284K | |
![]() | RepeatProteinMask | 2024-06-05 10:04 | 17K | |
![]() | ReportThresholdCoverage | 2023-05-30 17:09 | 1.6K | |
![]() | Rscript | 2024-06-05 10:04 | 17K | |
![]() | SanityCheckEvidence | 2023-05-30 17:09 | 1.6K | |
![]() | SoftClipsToSplitReads | 2023-05-30 17:09 | 1.6K | |
![]() | SplicedAlignment.pm | 2022-09-23 13:06 | 12K | |
![]() | SubsetToTaxonomy | 2023-05-30 17:09 | 1.6K | |
![]() | VirusBreakendFilter | 2023-05-30 17:09 | 1.6K | |
![]() | Xcalcmem.sh | 2023-05-22 19:17 | 3.2K | |
![]() | a_sample_mt.sh | 2023-05-22 19:17 | 2.1K | |
![]() | aa2nonred.pl | 2023-03-06 23:47 | 20K | |
![]() | abi-dump | 2024-02-27 16:48 | 4.5M | |
![]() | abi-dump.3 | 2024-02-27 16:48 | 4.5M | |
![]() | abi-dump.3.0.0 | 2024-02-27 16:48 | 4.5M | |
![]() | abi-load | 2024-02-27 16:48 | 5.9M | |
![]() | abi-load.3 | 2024-02-27 16:48 | 5.9M | |
![]() | abi-load.3.0.0 | 2024-02-27 16:48 | 5.9M | |
![]() | accn-at-a-time | 2021-06-23 23:50 | 229 | |
![]() | ace2sam | 2023-09-26 19:25 | 25K | |
![]() | activate-global-python-argcomplete | 2024-06-05 10:04 | 5.3K | |
![]() | add_name_to_gff3.pl | 2023-03-06 23:47 | 3.4K | |
![]() | addadapters.sh | 2023-05-22 19:17 | 2.6K | |
![]() | addssu.sh | 2023-05-22 19:17 | 2.2K | |
![]() | adig | 2024-02-23 05:39 | 31K | |
![]() | adjusthomopolymers.sh | 2023-05-22 19:17 | 2.1K | |
![]() | aggregateBinDepths.pl | 2020-01-04 15:14 | 1.3K | |
![]() | aggregateContigOverlapsByBin.pl | 2020-01-04 15:14 | 2.8K | |
![]() | ahost | 2024-02-23 05:39 | 17K | |
![]() | align-columns | 2021-08-08 13:25 | 1.4K | |
![]() | align-info | 2024-02-27 16:48 | 4.4M | |
![]() | align-info.3 | 2024-02-27 16:48 | 4.4M | |
![]() | align-info.3.0.0 | 2024-02-27 16:48 | 4.4M | |
![]() | alimask | 2024-06-05 10:04 | 368K | |
![]() | alltoall.sh | 2023-05-22 19:17 | 2.0K | |
![]() | aln2wig | 2023-03-06 23:47 | 21K | |
![]() | amino-acid-composition | 2021-06-23 23:50 | 673 | |
![]() | analyzeaccession.sh | 2023-05-22 19:17 | 1.4K | |
![]() | analyzegenes.sh | 2023-05-22 19:17 | 1.4K | |
![]() | analyzesketchresults.sh | 2023-05-22 19:17 | 2.2K | |
![]() | annotate | 2022-03-31 11:11 | 16K | |
![]() | annotateBed | 2024-03-05 15:30 | 41 | |
![]() | applyvariants.sh | 2023-05-22 19:17 | 2.6K | |
![]() | archive-pubmed | 2021-06-23 23:50 | 5.0K | |
![]() | aria2c | 2022-08-14 08:41 | 17K | |
![]() | aserver | 2022-10-25 07:57 | 42K | |
![]() | asn2xml | 2021-06-23 23:50 | 177 | |
![]() | assistant | 2023-01-22 16:16 | 758K | |
![]() | attr | 2024-06-05 10:04 | 17K | |
![]() | augustify.py | 2022-09-23 13:06 | 27K | |
![]() | augustus | 2023-03-06 23:47 | 2.3M | |
![]() | augustus2browser.pl | 2023-03-06 23:47 | 3.0K | |
![]() | augustus2gbrowse.pl | 2023-03-06 23:47 | 393 | |
![]() | autoAug.pl | 2023-03-06 23:47 | 53K | |
![]() | autoAugPred.pl | 2023-03-06 23:47 | 23K | |
![]() | autoAugTrain.pl | 2023-03-06 23:47 | 45K | |
![]() | autopoint | 2024-06-05 10:04 | 27K | |
![]() | awk | 2024-06-05 10:04 | 778K | |
![]() | balsam | 2023-01-22 16:16 | 35K | |
![]() | bam-load | 2024-02-27 16:48 | 5.9M | |
![]() | bam-load.3 | 2024-02-27 16:48 | 5.9M | |
![]() | bam-load.3.0.0 | 2024-02-27 16:48 | 5.9M | |
![]() | bam2hints | 2023-03-06 23:47 | 48K | |
![]() | bam2wig | 2023-03-06 23:47 | 17K | |
![]() | bamToBed | 2024-03-05 15:30 | 41 | |
![]() | bamToFastq | 2024-03-05 15:30 | 43 | |
![]() | bamToWig.py | 2022-09-23 13:06 | 13K | |
![]() | bamtools | 2022-02-22 22:35 | 1.6M | |
![]() | bbcms.sh | 2023-05-22 19:17 | 6.4K | |
![]() | bbcountunique.sh | 2023-05-22 19:17 | 2.8K | |
![]() | bbduk.sh | 2023-05-22 19:17 | 20K | |
![]() | bbest.sh | 2023-05-22 19:17 | 1.4K | |
![]() | bbfakereads.sh | 2023-05-22 19:17 | 2.9K | |
![]() | bbmap.sh | 2023-05-22 19:17 | 20K | |
![]() | bbmapskimmer.sh | 2023-05-22 19:17 | 1.1K | |
![]() | bbmask.sh | 2023-05-22 19:17 | 4.4K | |
![]() | bbmerge-auto.sh | 2023-05-22 19:17 | 1.2K | |
![]() | bbmerge.sh | 2023-05-22 19:17 | 14K | |
![]() | bbnorm.sh | 2023-05-22 19:17 | 9.8K | |
![]() | bbrealign.sh | 2023-05-22 19:17 | 3.3K | |
![]() | bbrename.sh | 2023-05-22 19:17 | 396 | |
![]() | bbsketch.sh | 2023-05-22 19:17 | 456 | |
![]() | bbsplit.sh | 2023-05-22 19:17 | 5.9K | |
![]() | bbsplitpairs.sh | 2023-05-22 19:17 | 3.3K | |
![]() | bbstats.sh | 2023-05-22 19:17 | 392 | |
![]() | bbversion.sh | 2023-05-22 19:17 | 517 | |
![]() | bbwrap.sh | 2023-05-22 19:17 | 2.0K | |
![]() | bc | 2021-09-18 10:19 | 93K | |
![]() | bcftools | 2024-06-05 10:04 | 1.2M | |
![]() | bdf2gdfont.pl | 2024-06-05 10:04 | 4.6K | |
![]() | bdftogd | 2022-03-31 11:10 | 3.9K | |
![]() | bed12ToBed6 | 2024-03-05 15:30 | 44 | |
![]() | bedToBam | 2024-03-05 15:30 | 41 | |
![]() | bedToIgv | 2024-03-05 15:30 | 36 | |
![]() | bedgraph2wig.pl | 2023-03-06 23:47 | 3.3K | |
![]() | bedpeToBam | 2024-03-05 15:30 | 43 | |
![]() | bedtools | 2024-06-05 10:04 | 3.6M | |
![]() | between-two-genes | 2021-06-23 23:50 | 235 | |
![]() | bgzip | 2024-06-05 10:04 | 850K | |
![]() | bigRmskAlignBed.as | 2023-10-19 14:13 | 1.0K | |
![]() | bigRmskBed.as | 2023-10-19 14:13 | 913 | |
![]() | biom | 2024-06-05 10:04 | 266 | |
![]() | blast2sam.pl | 2020-07-21 10:01 | 5.3K | |
![]() | blast_formatter | 2024-06-05 10:04 | 29M | |
![]() | blast_report | 2024-06-05 10:04 | 29M | |
![]() | blastdb_aliastool | 2024-06-05 10:04 | 18M | |
![]() | blastdb_convert | 2024-06-05 10:04 | 20M | |
![]() | blastdb_path | 2024-06-05 10:04 | 18M | |
![]() | blastdbcheck | 2024-06-05 10:04 | 21M | |
![]() | blastdbcmd | 2024-06-05 10:04 | 26M | |
![]() | blastdbcp | 2024-06-05 10:04 | 20M | |
![]() | blastn | 2024-06-05 10:04 | 29M | |
![]() | blastn_vdb | 2023-08-25 19:20 | 578K | |
![]() | blastp | 2024-06-05 10:04 | 29M | |
![]() | blastx | 2024-06-05 10:04 | 29M | |
![]() | blat2gbrowse.pl | 2023-03-06 23:47 | 4.6K | |
![]() | blat2hints.pl | 2023-03-06 23:47 | 32K | |
![]() | block2prfl.pl | 2023-03-06 23:47 | 11K | |
![]() | bloomfilter.sh | 2023-05-22 19:17 | 3.9K | |
![]() | bloomfilterparser.sh | 2023-05-22 19:17 | 1.3K | |
![]() | blst2tkns | 2021-09-28 13:25 | 701 | |
![]() | bowtie2 | 2023-05-16 06:50 | 26K | |
![]() | bowtie2-align-l | 2024-06-05 10:04 | 12M | |
![]() | bowtie2-align-s | 2024-06-05 10:04 | 12M | |
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![]() | bowtie2-build-s | 2024-06-05 10:04 | 5.0M | |
![]() | bowtie2-inspect | 2023-05-16 06:50 | 2.7K | |
![]() | bowtie2-inspect-l | 2024-06-05 10:04 | 1.8M | |
![]() | bowtie2-inspect-s | 2024-06-05 10:04 | 1.8M | |
![]() | bowtie2sam.pl | 2014-08-18 15:29 | 3.3K | |
![]() | bp | 2024-06-05 10:04 | 294 | |
![]() | bracken | 2023-09-21 00:50 | 4.4K | |
![]() | bracken-build | 2023-09-21 00:50 | 9.4K | |
![]() | brotli | 2023-09-29 08:20 | 34K | |
![]() | buildRMLibFromEMBL.pl | 2024-06-05 10:04 | 4.6K | |
![]() | buildSummary.pl | 2023-10-19 14:13 | 24K | |
![]() | build_env_setup.sh | 2024-06-05 10:04 | 9.5K | |
![]() | bunzip2 | 2023-11-06 09:12 | 294K | |
![]() | busco | 2023-08-10 11:14 | 1.6K | |
![]() | bwa | 2023-05-15 19:59 | 335K | |
![]() | bzcat | 2023-11-06 09:12 | 294K | |
![]() | bzcmp | 2023-11-06 09:12 | 2.1K | |
![]() | bzdiff | 2023-11-06 09:12 | 2.1K | |
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![]() | cache-mgr | 2024-02-27 16:48 | 4.3M | |
![]() | cache-mgr.3 | 2024-02-27 16:48 | 4.3M | |
![]() | cache-mgr.3.0.0 | 2024-02-27 16:48 | 4.3M | |
![]() | cairo-trace | 2024-06-05 10:04 | 3.0K | |
![]() | calcDivergenceFromAlign.pl | 2024-06-05 10:04 | 11K | |
![]() | calcmem.sh | 2023-05-22 19:17 | 5.6K | |
![]() | calctruequality.sh | 2023-05-22 19:17 | 5.6K | |
![]() | callgenes.sh | 2023-05-22 19:17 | 2.3K | |
![]() | callpeaks.sh | 2023-05-22 19:17 | 2.3K | |
![]() | callvariants.sh | 2023-05-22 19:17 | 9.2K | |
![]() | callvariants2.sh | 2023-05-22 19:17 | 1.4K | |
![]() | canbusutil | 2023-01-22 16:16 | 43K | |
![]() | captoinfo | 2024-03-19 12:43 | 90K | |
![]() | cdbfasta | 2024-04-23 03:18 | 99K | |
![]() | cdbyank | 2024-04-23 03:18 | 94K | |
![]() | cds-mapping-stats | 2021-03-26 15:59 | 10M | |
![]() | cds-subgraphs | 2021-03-26 15:59 | 11M | |
![]() | cegma2gff.pl | 2023-03-06 23:47 | 2.2K | |
![]() | certutil | 2024-02-16 01:31 | 189K | |
![]() | cg-load | 2024-02-27 16:48 | 4.7M | |
![]() | cg-load.3 | 2024-02-27 16:48 | 4.7M | |
![]() | cg-load.3.0.0 | 2024-02-27 16:48 | 4.7M | |
![]() | checkParamArchive.pl | 2023-03-06 23:47 | 3.8K | |
![]() | checkUTR | 2022-09-23 13:06 | 1.1K | |
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![]() | cleanDOSfasta.pl | 2023-03-06 23:47 | 539 | |
![]() | cleanup-blastdb-volumes.py | 2023-10-09 22:16 | 6.1K | |
![]() | clear | 2024-03-19 12:43 | 14K | |
![]() | closestBed | 2024-03-05 15:30 | 40 | |
![]() | clumpify.sh | 2023-05-22 19:17 | 12K | |
![]() | clusterAndSplitGenes.pl | 2023-03-06 23:47 | 7.4K | |
![]() | clusterBed | 2024-03-05 15:30 | 40 | |
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![]() | combine_bracken_outputs.py | 2023-09-21 00:50 | 5.8K | |
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![]() | compare_masking.pl | 2023-03-06 23:47 | 1.6K | |
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![]() | compile.bat | 2023-03-20 19:37 | 824 | |
![]() | compile.make | 2023-03-20 19:37 | 503 | |
![]() | compileSpliceCands | 2023-03-06 23:47 | 26K | |
![]() | compile_et | 2024-06-05 10:04 | 876 | |
![]() | complementBed | 2024-03-05 15:30 | 43 | |
![]() | computeFlankingRegion.pl | 2023-03-06 23:47 | 2.3K | |
![]() | conda-pack | 2024-06-05 10:04 | 276 | |
![]() | conda_build.sh | 2023-05-22 19:17 | 379 | |
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![]() | consect.sh | 2023-05-22 19:17 | 1.9K | |
![]() | consensus.sh | 2023-05-22 19:17 | 3.3K | |
![]() | contigOverlaps | 2022-11-19 17:35 | 539K | |
![]() | convert2blastmask | 2024-06-05 10:04 | 20M | |
![]() | corelist | 2024-06-05 10:04 | 15K | |
![]() | coronaspades.py | 2021-03-10 09:25 | 29K | |
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![]() | countgc.sh | 2023-05-22 19:17 | 1.2K | |
![]() | countsharedlines.sh | 2023-05-22 19:17 | 2.1K | |
![]() | coverageBed | 2024-03-05 15:30 | 41 | |
![]() | cpan | 2024-06-05 10:04 | 8.3K | |
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![]() | createAugustusJoblist.pl | 2023-03-06 23:47 | 7.3K | |
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![]() | csv2xml | 2021-06-23 23:50 | 177 | |
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![]() | cutgff.sh | 2023-05-22 19:17 | 2.9K | |
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![]() | cythonize | 2024-06-05 10:04 | 282 | |
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![]() | decontaminate.sh | 2023-05-22 19:17 | 4.9K | |
![]() | dedupe.sh | 2023-05-22 19:17 | 8.9K | |
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![]() | del_from_prfl.pl | 2023-03-06 23:47 | 3.2K | |
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![]() | demuxbyname.sh | 2023-05-22 19:17 | 7.3K | |
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![]() | diskbench.sh | 2023-05-22 19:17 | 1.8K | |
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