.coveragerc
CHANGELOG.md
COPYING.txt
MANIFEST.in
Makefile
README.md
setup.cfg
setup.py
gneiss/__init__.py
gneiss/_model.py
gneiss/balances.py
gneiss/sort.py
gneiss/util.py
gneiss.egg-info/PKG-INFO
gneiss.egg-info/SOURCES.txt
gneiss.egg-info/dependency_links.txt
gneiss.egg-info/requires.txt
gneiss.egg-info/top_level.txt
gneiss/cluster/__init__.py
gneiss/cluster/_pba.py
gneiss/cluster/tests/__init__.py
gneiss/cluster/tests/test_pba.py
gneiss/cluster/tests/data/polytomy.qza
gneiss/cluster/tests/data/test_composition.biom.qza
gneiss/cluster/tests/data/test_gradient.biom.qza
gneiss/cluster/tests/data/test_metadata.txt
gneiss/cluster/tests/data/tree.qza
gneiss/cluster/tests/data/weighted.biom.qza
gneiss/composition/__init__.py
gneiss/composition/_composition.py
gneiss/composition/_variance.py
gneiss/composition/tests/test_composition.py
gneiss/composition/tests/test_variance.py
gneiss/composition/tests/data/exp_varmat.txt
gneiss/plot/__init__.py
gneiss/plot/_decompose.py
gneiss/plot/_dendrogram.py
gneiss/plot/_heatmap.py
gneiss/plot/_radial.py
gneiss/plot/_regression_plot.py
gneiss/plot/tests/#test_dendrogram.py#
gneiss/plot/tests/dendrogram.ipynb
gneiss/plot/tests/test_decompose.py
gneiss/plot/tests/test_dendrogram.py
gneiss/plot/tests/test_heatmap.py
gneiss/plot/tests/test_radial.py
gneiss/plot/tests/test_regression_plot.py
gneiss/plot/tests/.ipynb_checkpoints/dendrogram-checkpoint.ipynb
gneiss/plot/tests/data/example.nwk
gneiss/plot/tests/data/exp_pred.csv
gneiss/plot/tests/data/exp_resid.csv
gneiss/regression/__init__.py
gneiss/regression/_mixedlm.py
gneiss/regression/_model.py
gneiss/regression/_ols.py
gneiss/regression/tests/__init__.py
gneiss/regression/tests/test_mixedlm.py
gneiss/regression/tests/test_model.py
gneiss/regression/tests/test_ols.py
gneiss/regression/tests/data/balances.csv
gneiss/regression/tests/data/coefficients.csv
gneiss/regression/tests/data/exp_lme_results.txt
gneiss/regression/tests/data/exp_lme_results2.txt
gneiss/regression/tests/data/exp_ols_results.txt
gneiss/regression/tests/data/exp_ols_results2.txt
gneiss/regression/tests/data/kfold.csv
gneiss/regression/tests/data/kfold2.csv
gneiss/regression/tests/data/lme.pickle
gneiss/regression/tests/data/lme_balances.qza
gneiss/regression/tests/data/lme_tree.qza
gneiss/regression/tests/data/loo.csv
gneiss/regression/tests/data/loo2.csv
gneiss/regression/tests/data/lovo.csv
gneiss/regression/tests/data/lovo2.csv
gneiss/regression/tests/data/not-regression.pickle
gneiss/regression/tests/data/ols.pickle
gneiss/regression/tests/data/ols_balances.qza
gneiss/regression/tests/data/ols_tree.qza
gneiss/regression/tests/data/predicted.csv
gneiss/regression/tests/data/pvalues.csv
gneiss/regression/tests/data/residuals.csv
gneiss/regression/tests/data/test_lme_composition.qza
gneiss/regression/tests/data/test_lme_metadata.txt
gneiss/regression/tests/data/test_ols_composition.qza
gneiss/regression/tests/data/test_ols_metadata.txt
gneiss/regression/tests/data/test_tree.qza
gneiss/tests/test_balances.py
gneiss/tests/test_model.py
gneiss/tests/test_sort.py
gneiss/tests/test_util.py
gneiss/tests/data/large_tree.nwk
gneiss/tests/data/large_tree_basis.txt