from __future__ import absolute_import # #START_LICENSE########################################################### # # # This file is part of the Environment for Tree Exploration program # (ETE). http://etetoolkit.org # # ETE is free software: you can redistribute it and/or modify it # under the terms of the GNU General Public License as published by # the Free Software Foundation, either version 3 of the License, or # (at your option) any later version. # # ETE is distributed in the hope that it will be useful, but WITHOUT # ANY WARRANTY; without even the implied warranty of MERCHANTABILITY # or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public # License for more details. # # You should have received a copy of the GNU General Public License # along with ETE. If not, see . # # # ABOUT THE ETE PACKAGE # ===================== # # ETE is distributed under the GPL copyleft license (2008-2015). # # If you make use of ETE in published work, please cite: # # Jaime Huerta-Cepas, Joaquin Dopazo and Toni Gabaldon. # ETE: a python Environment for Tree Exploration. Jaime BMC # Bioinformatics 2010,:24doi:10.1186/1471-2105-11-24 # # Note that extra references to the specific methods implemented in # the toolkit may be available in the documentation. # # More info at http://etetoolkit.org. Contact: huerta@embl.de # # # #END_LICENSE############################################################# # -*- coding: utf-8 -*- # Form implementation generated from reading ui file 'show_newick.ui' # # Created: Mon Sep 14 11:11:49 2009 # by: PyQt4 UI code generator 4.5.4 # # WARNING! All changes made in this file will be lost! from __future__ import absolute_import from .qt import QtCore, QtGui class Ui_Codeml(object): def setupUi(self, Codeml): Codeml.setObjectName("Codeml") Codeml.resize(594, 397) self.model = QtGui.QComboBox(Codeml) self.model.setGeometry(QtCore.QRect(120,110, 110, 23)) self.model.setObjectName("model") self.model.addItem(QtCore.QString()) self.model.addItem(QtCore.QString()) self.model.addItem(QtCore.QString()) self.model.addItem(QtCore.QString()) self.model.addItem(QtCore.QString()) self.model.addItem(QtCore.QString()) self.model.addItem(QtCore.QString()) self.model.addItem(QtCore.QString()) self.model.addItem(QtCore.QString()) self.model.addItem(QtCore.QString()) self.label = QtGui.QLabel(Codeml) self.label.setGeometry(QtCore.QRect(30, 110, 91, 20)) self.label.setObjectName("label") self.verticalLayoutWidget = QtGui.QWidget(Codeml) self.verticalLayoutWidget.setGeometry(QtCore.QRect(300, 10, 258, 361)) self.verticalLayoutWidget.setObjectName("verticalLayoutWidget") self.verticalLayout = QtGui.QVBoxLayout(self.verticalLayoutWidget) self.verticalLayout.setObjectName("verticalLayout") self.ctrlBox = QtGui.QTextEdit(self.verticalLayoutWidget) self.ctrlBox.setObjectName("ctrlBox") self.verticalLayout.addWidget(self.ctrlBox) self.pushButton = QtGui.QPushButton(Codeml) self.label_2 = QtGui.QLabel(Codeml) self.label_2.setGeometry(QtCore.QRect(10, 20, 160, 20)) self.label_2.setObjectName("label_2") self.workdir = QtGui.QLineEdit(Codeml) self.workdir.setGeometry(QtCore.QRect(10, 40, 250, 25)) self.workdir.setObjectName("workdir") self.label_3 = QtGui.QLabel(Codeml) self.label_3.setGeometry(QtCore.QRect(10, 60, 160, 20)) self.label_3.setObjectName("label_3") self.label_4 = QtGui.QLabel(Codeml) self.label_4.setGeometry(QtCore.QRect(35, 273, 260, 20)) self.label_4.setObjectName("label_4") self.useprerun = QtGui.QCheckBox(Codeml) self.useprerun.setGeometry(QtCore.QRect(10, 270, 221, 24)) self.useprerun.setObjectName("useprerun") self.label_5 = QtGui.QLabel(Codeml) self.label_5.setGeometry(QtCore.QRect(35, 293, 260, 20)) self.label_5.setObjectName("label_5") self.display = QtGui.QCheckBox(Codeml) self.display.setGeometry(QtCore.QRect(10, 290, 221, 24)) self.display.setObjectName("display") self.codemlpath = QtGui.QLineEdit(Codeml) self.codemlpath.setGeometry(QtCore.QRect(10, 80, 250, 25)) self.codemlpath.setObjectName("codemlpath") self.pushButton.setGeometry(QtCore.QRect(240, 350, 51, 29)) self.pushButton.setObjectName("pushButton") self.retranslateUi(Codeml) QtCore.QMetaObject.connectSlotsByName(Codeml) self.model.activate.connect(Codeml.update_model) self.pushButton.released.connect(Codeml.run) #QtCore.QObject.connect(self.model, QtCore.SIGNAL("activated(QString)"), Codeml.update_model) #QtCore.QObject.connect(self.pushButton, QtCore.SIGNAL("released()"), Codeml.run) def retranslateUi(self, Codeml): Codeml.setWindowTitle(QtGui.QApplication.translate("Codeml", "Dialog", None, QtGui.QApplication.UnicodeUTF8)) self.model.setItemText(0, QtGui.QApplication.translate("Model", "M0" , None, QtGui.QApplication.UnicodeUTF8)) self.model.setItemText(1, QtGui.QApplication.translate("Model", "M1" , None, QtGui.QApplication.UnicodeUTF8)) self.model.setItemText(2, QtGui.QApplication.translate("Model", "M2" , None, QtGui.QApplication.UnicodeUTF8)) self.model.setItemText(3, QtGui.QApplication.translate("Model", "M7" , None, QtGui.QApplication.UnicodeUTF8)) self.model.setItemText(4, QtGui.QApplication.translate("Model", "M8" , None, QtGui.QApplication.UnicodeUTF8)) self.model.setItemText(5, QtGui.QApplication.translate("Model", "free-branch" , None, QtGui.QApplication.UnicodeUTF8)) self.model.setItemText(6, QtGui.QApplication.translate("Model", "branch-site.A" , None, QtGui.QApplication.UnicodeUTF8)) self.model.setItemText(7, QtGui.QApplication.translate("Model", "branch-site.A1", None, QtGui.QApplication.UnicodeUTF8)) self.model.setItemText(8, QtGui.QApplication.translate("Model", "branch-free" , None, QtGui.QApplication.UnicodeUTF8)) self.model.setItemText(9, QtGui.QApplication.translate("Model", "branch-neut" , None, QtGui.QApplication.UnicodeUTF8)) self.label.setText(QtGui.QApplication.translate("Model", "Model to test: ", None, QtGui.QApplication.UnicodeUTF8)) self.label_2.setText(QtGui.QApplication.translate("Codeml", "Codeml working directory:", None, QtGui.QApplication.UnicodeUTF8)) self.label_3.setText(QtGui.QApplication.translate("Codeml", "Path to Codeml executable: ", None, QtGui.QApplication.UnicodeUTF8)) self.label_4.setText(QtGui.QApplication.translate("Codeml", "Search for already runned data.", None, QtGui.QApplication.UnicodeUTF8)) self.label_5.setText(QtGui.QApplication.translate("Codeml", "Display resulting info, as histogram (only for sites models.)", None, QtGui.QApplication.UnicodeUTF8)) self.pushButton.setText(QtGui.QApplication.translate("Model", "Run", None, QtGui.QApplication.UnicodeUTF8))