If a package added a class to a class union in another

package, loading the first package gave erroneous warnings

belonging to the (C internal) default method.   In

the generic to the default method, such that the formal argument list

requires acceptance of the licence for non-default standard

instead of variances, when the argument was a list of

contour lines for the standardized residuals for

re-analyse previously defined methods, meaning that calls to

methods defined later would fail. (Reported by Charles Tilford).

gave an internal error installing a package called

from a tarball on a case-insensitive file system.

terminal interface is now supported when

Unfortunately that cannot guarantee that any particular

URL can be accessed.  For example, server and client

have to successfully negotiate a cryptographic protocol (TLS/SSL,

) and the server's identity has to be verifiable

the available certificates.  Different access methods may allow

different protocols or use private certificate bundles: we

give access to the validity checks for inputs used by

Experimental new functionality for S3 method checking, notably

matrix (multivariate) time-series, i.e. when

(Windows only)  The GUI menu item to install local packages

now signals an error when given invalid input,

.  Packages defining S4 classes with the above

S3/S4 classes as slots should be reinstalled.

% notably if their classes are reused in other

% packages. e.g. re-install arules for arulesSequence, flexmix for betareg

extracting the estimated standard deviation aka

the HTML help system if it is available.  If no news file is found,

Subscripting of matrix/array objects of type

complex value with zero real part and missing imaginary part.

now allow non-default values of the cairographics

This now defaults to 300 on all platforms: that is the default

documented by cairographics, but apparently was not used by all

argument (previously names were only used when

The out-of-the box Bioconductor mirror has been changed to

The undocumented switching of methods for