Low-level utilities to retrieve data from the UCSC Genome Browser


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Documentation for package ‘UCSC.utils’ version 1.2.0

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fetch_UCSC_track_data Fetch UCSC track data
get_organism_for_UCSC_genome List UCSC genomes
get_UCSC_chrom_sizes List UCSC chromosome sizes
list_UCSC_genomes List UCSC genomes
list_UCSC_tracks List UCSC tracks and associated primary tables
UCSC.api.url Get or set the default UCSC API URL
UCSC_dbselect Conveniently retrieve data from the UCSC MariaDB server