ancom |
Analysis of Composition of Microbiomes (ANCOM) |
ancombc |
Analysis of Compositions of Microbiomes with Bias Correction (ANCOM-BC) |
ancombc2 |
Analysis of Compositions of Microbiomes with Bias Correction 2 (ANCOM-BC2) |
data_sanity_check |
Data Sanity and Integrity Check |
QMP |
Quantitative Microbiome Project data |
secom_dist |
Sparse estimation of distance correlations among microbiomes |
secom_linear |
Sparse estimation of linear correlations among microbiomes |
sim_plnm |
Simulate Microbial Absolute Abundance Data by Poisson lognormal (PLN) model Based on a Real Dataset |