AdapterRemoval ver. 2.1.7
Trimming of paired-end reads


[Adapter sequences]
Adapter1[1]: AGATCGGAAGAGCACACGTCTGAACTCCAGTCACNNNNNNATCTCGTATGCCGTCTTCTGCTTG
Adapter2[1]: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATT


[Adapter trimming]
RNG seed: 416750178
Alignment shift value: 2
Global mismatch threshold: 0.333333
Quality format (input): Phred+33
Quality score max (input): 41
Quality format (output): Phred+33
Quality score max (output): 41
Mate-number separator (input): '/'
Trimming 5p: 0
Trimming 3p: 0
Trimming Ns: No
Trimming Phred scores <= 2: No
Trimming using sliding windows: No
Minimum genomic length: 15
Maximum genomic length: 4294967295
Collapse overlapping reads: Yes
Minimum overlap (in case of collapse): 11


[Trimming statistics]
Total number of read pairs: 1
Number of unaligned read pairs: 0
Number of well aligned read pairs: 1
Number of discarded mate 1 reads: 1
Number of singleton mate 1 reads: 0
Number of discarded mate 2 reads: 1
Number of singleton mate 2 reads: 0
Number of reads with adapters[1]: 2
Number of full-length collapsed pairs: 0
Number of truncated collapsed pairs: 0
Number of retained reads: 0
Number of retained nucleotides: 0
Average length of retained reads: 0


[Length distribution]
Length	Mate1	Mate2	Singleton	Collapsed	CollapsedTruncated	Discarded	All
0	0	0	0	0	0	1	1