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"CAAAG":145260, "CAATA":80053, "CAATT":78059, "CAATC":67307, "CAATG":100929, "CAACA":103031, "CAACT":94031, "CAACC":89374, "CAACG":20156, "CAAGA":129644, "CAAGT":77156, "CAAGC":84373, "CAAGG":105807, "CATAA":64260, "CATAT":77242, "CATAC":60536, "CATAG":58052, "CATTA":62134, "CATTT":125856, "CATTC":106089, "CATTG":100458, "CATCA":129445, "CATCT":144972, "CATCC":102220, "CATCG":41596, "CATGA":184001, "CATGT":114054, "CATGC":151048, "CATGG":162332, "CACAA":99087, "CACAT":106112, "CACAC":124398, "CACAG":145147, "CACTA":48314, "CACTT":105724, "CACTC":102461, "CACTG":205985, "CACCA":122991, "CACCT":117329, "CACCC":108044, "CACCG":36253, "CACGA":57804, "CACGT":170580, "CACGC":41916, "CACGG":40996, "CAGAA":128538, "CAGAT":112190, "CAGAC":109056, "CAGAG":177149, "CAGTA":78469, "CAGTT":115545, "CAGTC":159074, "CAGTG":204246, "CAGCA":156327, "CAGCT":145233, "CAGCC":152013, "CAGCG":45374, "CAGGA":174295, "CAGGT":111717, "CAGGC":170733, "CAGGG":192467, "CTAAA":73538, "CTAAT":50394, "CTAAC":43027, "CTAAG":59729, "CTATA":49152, "CTATT":68983, "CTATC":52839, "CTATG":58097, "CTACA":59722, "CTACT":56090, "CTACC":48803, "CTACG":16831, "CTAGA":68332, "CTAGT":43272, "CTAGC":35022, "CTAGG":58352, "CTTAA":62156, "CTTAT":63846, "CTTAC":44463, "CTTAG":58749, "CTTTA":95626, "CTTTT":154665, "CTTTC":145172, "CTTTG":143488, "CTTCA":134481, "CTTCT":160536, "CTTCC":160173, "CTTCG":44294, "CTTGA":107804, "CTTGT":86081, "CTTGC":93838, "CTTGG":105693, "CTCAA":101431, "CTCAT":120034, "CTCAC":99192, "CTCAG":176477, "CTCTA":62452, "CTCTT":154528, "CTCTC":159303, "CTCTG":175764, "CTCCA":192754, "CTCCT":177199, "CTCCC":159591, "CTCCG":46439, "CTCGA":105916, "CTCGT":37268, "CTCGC":47900, "CTCGG":49513, "CTGAA":144462, "CTGAT":213162, "CTGAC":102261, "CTGAG":175241, "CTGTA":80779, "CTGTT":100229, "CTGTC":119533, "CTGTG":145233, "CTGCA":169360, "CTGCT":158624, "CTGCC":154058, "CTGCG":49637, "CTGGA":200465, "CTGGT":108172, "CTGGC":120103, "CTGGG":185691, "CCAAA":121291, "CCAAT":87012, "CCAAC":91967, "CCAAG":107025, "CCATA":63567, "CCATT":94201, "CCATC":116898, "CCATG":162047, "CCACA":112095, "CCACT":114748, "CCACC":132526, "CCACG":89297, "CCAGA":135106, "CCAGT":134474, "CCAGC":134986, "CCAGG":212162, "CCTAA":55333, "CCTAT":41539, "CCTAC":51093, "CCTAG":59065, "CCTTA":49342, "CCTTT":118589, "CCTTC":144836, "CCTTG":105556, "CCTCA":133649, "CCTCT":173530, "CCTCC":159321, "CCTCG":64896, "CCTGA":146660, "CCTGT":116265, "CCTGC":173789, "CCTGG":211321, "CCCAA":92679, "CCCAT":105231, "CCCAC":132599, "CCCAG":185602, "CCCTA":48919, "CCCTT":115166, "CCCTC":134221, "CCCTG":192623, "CCCCA":153632, "CCCCT":134302, "CCCCC":128945, "CCCCG":86753, "CCCGA":59325, "CCCGT":42147, "CCCGC":63140, "CCCGG":83196, "CCGAA":31152, "CCGAT":28737, "CCGAC":41618, "CCGAG":50018, "CCGTA":16192, "CCGTT":20875, "CCGTC":49407, "CCGTG":41136, "CCGCA":39145, "CCGCT":47090, "CCGCC":61121, "CCGCG":39609, "CCGGA":41155, "CCGGT":38680, "CCGGC":56142, "CCGGG":83711, "CGAAA":25974, "CGAAT":23199, "CGAAC":29135, "CGAAG":44781, "CGATA":13076, "CGATT":23782, "CGATC":34283, "CGATG":41833, "CGACA":36364, "CGACT":56269, "CGACC":56192, "CGACG":33817, "CGAGA":85390, "CGAGT":48513, "CGAGC":44143, "CGAGG":64555, "CGTAA":21139, "CGTAT":17695, "CGTAC":14824, "CGTAG":16739, "CGTTA":12976, "CGTTT":32932, "CGTTC":25466, "CGTTG":19691, "CGTCA":36185, "CGTCT":48345, "CGTCC":33027, "CGTCG":34576, "CGTGA":127645, "CGTGT":50586, "CGTGC":41724, "CGTGG":90748, "CGCAA":29360, "CGCAT":31093, "CGCAC":41571, "CGCAG":49196, "CGCTA":17364, "CGCTT":32775, "CGCTC":51022, "CGCTG":44473, "CGCCA":46926, "CGCCT":43412, "CGCCC":54164, "CGCCG":51684, "CGCGA":43820, "CGCGT":21807, "CGCGC":52128, "CGCGG":39768, "CGGAA":41666, "CGGAT":20321, "CGGAC":32916, "CGGAG":45912, "CGGTA":12975, "CGGTT":23232, "CGGTC":39058, "CGGTG":37081, "CGGCA":44278, "CGGCT":37656, "CGGCC":53417, "CGGCG":52116, "CGGGA":65949, "CGGGT":41851, "CGGGC":54359, "CGGGG":88700, "GAAAA":183239, "GAAAT":131952, "GAAAC":96244, "GAAAG":148444, "GAATA":78675, "GAATT":94544, "GAATC":87220, "GAATG":106984, "GAACA":105793, "GAACT":101541, "GAACC":88207, "GAACG":25873, "GAAGA":152979, "GAAGT":92838, "GAAGC":114859, "GAAGG":147428, "GATAA":62633, "GATAT":61622, "GATAC":47389, "GATAG":53587, "GATTA":51980, "GATTT":98608, "GATTC":87409, "GATTG":65989, "GATCA":302130, "GATCT":86505, "GATCC":70836, "GATCG":37339, "GATGA":130469, "GATGT":76378, "GATGC":96530, "GATGG":117362, "GACAA":75346, "GACAT":81610, "GACAC":89564, "GACAG":120592, "GACTA":47268, "GACTT":91782, "GACTC":117717, "GACTG":157427, "GACCA":79734, "GACCT":95046, "GACCC":97361, "GACCG":39093, "GACGA":35915, "GACGT":31915, "GACGC":32628, "GACGG":49599, "GAGAA":176481, "GAGAT":117680, "GAGAC":102384, "GAGAG":163177, "GAGTA":59115, "GAGTT":110058, "GAGTC":117634, "GAGTG":103481, "GAGCA":115823, "GAGCT":105763, "GAGCC":125292, "GAGCG":51264, "GAGGA":137514, "GAGGT":111732, "GAGGC":150993, "GAGGG":137507, "GTAAA":68738, "GTAAT":50623, "GTAAC":38187, "GTAAG":44109, "GTATA":50086, "GTATT":72266, "GTATC":45894, "GTATG":60500, "GTACA":53239, "GTACT":51297, "GTACC":36514, "GTACG":14684, "GTAGA":43070, "GTAGT":38858, "GTAGC":48481, "GTAGG":51440, "GTTAA":50479, "GTTAT":46595, "GTTAC":38772, "GTTAG":42583, "GTTTA":59059, "GTTTT":121363, "GTTTC":94572, "GTTTG":88094, "GTTCA":98824, "GTTCT":88271, "GTTCC":99277, "GTTCG":29512, "GTTGA":75339, "GTTGT":63798, "GTTGC":71580, "GTTGG":90946, "GTCAA":73993, "GTCAT":92674, "GTCAC":108248, "GTCAG":102669, "GTCTA":45014, "GTCTT":93688, "GTCTC":100911, "GTCTG":110699, "GTCCA":126631, "GTCCT":76706, "GTCCC":96526, "GTCCG":33421, "GTCGA":36322, "GTCGT":42671, "GTCGC":62516, "GTCGG":41987, "GTGAA":114588, "GTGAT":155243, "GTGAC":108152, "GTGAG":100467, "GTGTA":55884, "GTGTT":93657, "GTGTC":89844, "GTGTG":124161, "GTGCA":132875, "GTGCT":83655, "GTGCC":80202, "GTGCG":41282, "GTGGA":103196, "GTGGT":90447, "GTGGC":125373, "GTGGG":133944, "GCAAA":103952, "GCAAT":82879, "GCAAC":72315, "GCAAG":94591, "GCATA":54176, "GCATT":90315, "GCATC":95191, "GCATG":150348, "GCACA":102583, "GCACT":118122, "GCACC":78328, "GCACG":42754, "GCAGA":127817, "GCAGT":99550, "GCAGC":129916, "GCAGG":174122, "GCTAA":48805, "GCTAT":61047, "GCTAC":48760, "GCTAG":34796, "GCTTA":47851, "GCTTT":110073, "GCTTC":115306, "GCTTG":84033, "GCTCA":136752, "GCTCT":101736, "GCTCC":112325, "GCTCG":43900, "GCTGA":139524, "GCTGT":93951, "GCTGC":130924, "GCTGG":134975, "GCCAA":89536, "GCCAT":99903, "GCCAC":124267, "GCCAG":120504, "GCCTA":47518, "GCCTT":88901, "GCCTC":150532, "GCCTG":169893, "GCCCA":102190, "GCCCT":100439, "GCCCC":113986, "GCCCG":53995, "GCCGA":33136, "GCCGT":35622, "GCCGC":62851, "GCCGG":56260, "GCGAA":26945, "GCGAT":33282, "GCGAC":62778, "GCGAG":48526, "GCGTA":11790, "GCGTT":24314, "GCGTC":33214, "GCGTG":41825, "GCGCA":32323, "GCGCT":42081, "GCGCC":55722, "GCGCG":52565, "GCGGA":30977, "GCGGT":29820, "GCGGC":62891, "GCGGG":66014, "GGAAA":185191, "GGAAT":110016, "GGAAC":100098, "GGAAG":164120, "GGATA":46115, "GGATT":85968, "GGATC":70161, "GGATG":103060, "GGACA":119745, "GGACT":109703, "GGACC":70997, "GGACG":33419, "GGAGA":196581, "GGAGT":111027, "GGAGC":112379, "GGAGG":162448, "GGTAA":47372, "GGTAT":45504, "GGTAC":36248, "GGTAG":48923, "GGTTA":40561, "GGTTT":92661, "GGTTC":87546, "GGTTG":88338, "GGTCA":96137, "GGTCT":88883, "GGTCC":70980, "GGTCG":56247, "GGTGA":91150, "GGTGT":82153, "GGTGC":78680, "GGTGG":133522, "GGCAA":111778, "GGCAT":86759, "GGCAC":80322, "GGCAG":155346, "GGCTA":56623, "GGCTT":110589, "GGCTC":124616, "GGCTG":152885, "GGCCA":105286, "GGCCT":123244, "GGCCC":95992, "GGCCG":53438, "GGCGA":47965, "GGCGT":31501, "GGCGC":55871, "GGCGG":63652, "GGGAA":162959, "GGGAT":103402, "GGGAC":96916, "GGGAG":162389, "GGGTA":44362, "GGGTT":113394, "GGGTC":96796, "GGGTG":109104, "GGGCA":101804, "GGGCT":119991, "GGGCC":96467, "GGGCG":56062, "GGGGA":154467, "GGGGT":108873, "GGGGC":116456, "GGGGG":116503 }, "overrepresented_sequences": { } }, "command": "fastp --thread 8 --low_complexity_filter XXXX YYYYY quality --merge --include_unmerged --in1 NC_12_S28_R1.fastq --in2 NC_12_S28_R2.fastq --merged_out ../NC_12_S28.fastq -h NC_12_S28.html -j NC_12_S28.json " }