name	taxonomy_id	taxonomy_lvl	kraken_assigned_reads	added_reads	new_est_reads	fraction_total_reads
Bos taurus	9913	S	41734	525656	567390	0.30133
Bos mutus	72004	S	12922	42985	55907	0.02969
Bos gaurus x Bos taurus	1705790	S	1900	94949	96849	0.05144
Bos indicus x Bos taurus	30522	S	1042	32793	33835	0.01797
Bos indicus	9915	S	480	25361	25841	0.01372
Bos grunniens	30521	S	8	705	713	0.00038
Bubalus carabanensis	346063	S	1376	10354	11730	0.00623
Bubalus bubalis	89462	S	1347	9913	11260	0.00598
Bison bison	9901	S	829	9164	9993	0.00531
Tragelaphus scriptus	66440	S	29	92	121	0.00006
Ovis canadensis	37174	S	2059	2180	4239	0.00225
Ovis aries	9940	S	392	1509	1901	0.00101
Capra hircus	9925	S	89	432	521	0.00028
Budorcas taxicolor	37181	S	10	56	66	0.00004
Oryx dammah	59534	S	174	620	794	0.00042
Rangifer tarandus	9870	S	7449	21147	28596	0.01519
Odocoileus virginianus	9874	S	107	1115	1222	0.00065
Cervus elaphus	9860	S	4539	18577	23116	0.01228
Cervus canadensis	1574408	S	24	1074	1098	0.00058
Moschus berezovskii	68408	S	296	638	934	0.00050
Sus scrofa	9823	S	111	36	147	0.00008
Canis lupus	9612	S	141	42	183	0.00010
Eptesicus nilssonii	59451	S	51	8	59	0.00003
Homo sapiens	9606	S	780	14012	14792	0.00786
Gallus gallus	9031	S	43	16	59	0.00003
Aphis gossypii	80765	S	7169	3308	10477	0.00556
Aphis glycines	307491	S	8	601	609	0.00032
Sipha flava	143950	S	10	4	14	0.00001
Periphyllus acericola	1425412	S	6	1	7	0.00000
Aspergillus fumigatus	746128	S	13	23	36	0.00002
Aspergillus chevalieri	182096	S	8	8	16	0.00001
Aspergillus puulaauensis	1220207	S	7	2	9	0.00000
Aspergillus glaucus	41413	S	6	4	10	0.00001
Aspergillus terreus	33178	S	5	3	8	0.00000
Varicosporium sp.	2060626	S	5	57	62	0.00003
Kluyveromyces marxianus	4911	S	6	5	11	0.00001
uncultured fungus	175245	S	144	4584	4728	0.00251
Lichtheimia ramosa	688394	S	12	2	14	0.00001
Batrachochytrium dendrobatidis	109871	S	8	0	8	0.00000
Alnus glutinosa	3517	S	260	142	402	0.00021
Betula pendula	3505	S	130	19824	19954	0.01060
Betula platyphylla	78630	S	20	38	58	0.00003
Corylus avellana	13451	S	55	4	59	0.00003
Carpinus viminea	176864	S	30	1	31	0.00002
Rhododendron vialii	182163	S	13	23	36	0.00002
Hordeum vulgare	4513	S	479	942	1421	0.00075
Triticum aestivum	4565	S	5	12	17	0.00001
Avena sativa	4498	S	25	56	81	0.00004
Lolium perenne	4522	S	12	4	16	0.00001
Poa pratensis	4545	S	6	93	99	0.00005
Carex breviculmis	291501	S	12	21	33	0.00002
Equisetum arvense	3258	S	110	391	501	0.00027
Heteromita globosa	45107	S	34	894	928	0.00049
Babesia ovata	189622	S	7	1	8	0.00000
Thermoactinomyces vulgaris	2026	S	55532	54758	110290	0.05857
Thermoactinomyces sp. YT06	2507539	S	9884	1454	11338	0.00602
Thermoactinomyces intermedius	2024	S	85	6290	6375	0.00339
Laceyella sacchari	37482	S	3397	3093	6490	0.00345
Novibacillus thermophilus	1471761	S	227	76	303	0.00016
Geobacillus stearothermophilus	1422	S	759	8123	8882	0.00472
Geobacillus thermodenitrificans	33940	S	136	2080	2216	0.00118
Geobacillus sp. E263	391290	S	31	215	246	0.00013
Geobacillus sp. 12AMOR1	1629723	S	13	209	222	0.00012
Geobacillus sp. LC300	1519377	S	11	217	228	0.00012
Geobacillus sp. 47C-IIb	1963026	S	9	388	397	0.00021
Geobacillus sp. JS12	1813182	S	9	67	76	0.00004
Geobacillus sp. 44B	1963023	S	7	106	113	0.00006
Geobacillus sp. 46C-IIa	1963025	S	6	4	10	0.00001
[Bacillus] caldolyticus	1394	S	40	1350	1390	0.00074
Geobacillus thermoleovorans	33941	S	15	414	429	0.00023
Geobacillus thermocatenulatus	33938	S	8	20	28	0.00001
Geobacillus lituanicus	169283	S	6	124	130	0.00007
Geobacillus zalihae	213419	S	23	433	456	0.00024
Geobacillus genomosp. 3	1921421	S	12	7	19	0.00001
Geobacillus subterraneus	129338	S	10	14	24	0.00001
Bacillus smithii	1479	S	2244	3591	5835	0.00310
Bacillus subtilis	1423	S	265	12452	12717	0.00675
Bacillus paralicheniformis	1648923	S	99	201	300	0.00016
Bacillus licheniformis	1402	S	68	3553	3621	0.00192
Bacillus sp. X1(2014)	1565991	S	405	387	792	0.00042
Bacillus sp. OxB-1	98228	S	7	2	9	0.00000
Bacillus glycinifermentans	1664069	S	78	52	130	0.00007
Bacillus methanolicus	1471	S	33	31	64	0.00003
Bacillus altitudinis	293387	S	23	602	625	0.00033
Anoxybacillus flavithermus	33934	S	4406	9367	13773	0.00731
Anoxybacillus sediminis	2613334	S	2130	1709	3839	0.00204
Anoxybacillus caldiproteolyticus	247480	S	252	191	443	0.00024
Anoxybacillus gonensis	198467	S	15	89	104	0.00006
Anoxybacillus ayderensis	265546	S	8	35	43	0.00002
Anoxybacillus amylolyticus	294699	S	6	4	10	0.00001
Parageobacillus sp. KH3-4	2916802	S	1296	818	2114	0.00112
Parageobacillus thermoglucosidasius	1426	S	241	255	496	0.00026
Parageobacillus caldoxylosilyticus	81408	S	54	460	514	0.00027
Parageobacillus toebii	153151	S	13	209	222	0.00012
Shouchella clausii	79880	S	803	658	1461	0.00078
Peribacillus psychrosaccharolyticus	1407	S	447	498	945	0.00050
Peribacillus simplex	1478	S	13	132	145	0.00008
Peribacillus asahii	228899	S	8	10	18	0.00001
Peribacillus butanolivorans	421767	S	6	13	19	0.00001
Pradoshia sp. D12	2651284	S	474	277	751	0.00040
Lysinibacillus sp. 2017	2169540	S	104	116	220	0.00012
Lysinibacillus sp. IRB4-01	2998077	S	8	10	18	0.00001
Lysinibacillus sp. YS11	2072025	S	7	88	95	0.00005
Lysinibacillus pakistanensis	759811	S	37	59	96	0.00005
Aeribacillus pallidus	33936	S	219	1399	1618	0.00086
Neobacillus thermocopriae	1215031	S	160	481	641	0.00034
Neobacillus novalis	220687	S	8	14	22	0.00001
Heyndrickxia oleronia	38875	S	74	82	156	0.00008
Heyndrickxia coagulans	1398	S	56	183	239	0.00013
Psychrobacillus sp. INOP01	2829187	S	66	50	116	0.00006
Psychrobacillus glaciei	2283160	S	11	10	21	0.00001
Oceanobacillus oncorhynchi	545501	S	28	62	90	0.00005
Niallia circulans	1397	S	61	66	127	0.00007
Caldalkalibacillus thermarum	296745	S	46	24	70	0.00004
Caldibacillus thermoamylovorans	35841	S	27	54	81	0.00004
Priestia megaterium	1404	S	12	77	89	0.00005
Priestia flexa	86664	S	7	20	27	0.00001
Cytobacillus firmus	1399	S	8	21	29	0.00002
Bacillaceae bacterium ZC4	2065380	S	13	90	103	0.00005
Evansella sp. LMS18	2924033	S	8	2	10	0.00001
Halalkalibacterium halodurans	86665	S	5	13	18	0.00001
Thermobacillus composti	377615	S	6295	3276	9571	0.00508
Paenibacillus psychroresistens	1778678	S	1241	209	1450	0.00077
Paenibacillus sp. 32O-W	1695218	S	524	108	632	0.00034
Paenibacillus sp. PSB04	2866810	S	154	522	676	0.00036
Paenibacillus sp. IHBB 10380	1566358	S	113	48	161	0.00009
Paenibacillus sp. 19GGS1-52	2758563	S	41	9	50	0.00003
Paenibacillus sp. E222	2748863	S	39	105	144	0.00008
Paenibacillus sp. BIHB 4019	1870819	S	39	6	45	0.00002
Paenibacillus sp. HWE-109	1306526	S	22	5	27	0.00001
Paenibacillus sp. Y412MC10	481743	S	15	86	101	0.00005
Paenibacillus sp. BR1-192	3032287	S	9	129	138	0.00007
Paenibacillus sp. FSL H7-0737	1536775	S	9	11	20	0.00001
Paenibacillus sp. sptzw28	715179	S	9	1	10	0.00001
Paenibacillus sp. JZ16	1906272	S	7	4	11	0.00001
Paenibacillus sp. Dex70-1B	247650	S	7	0	7	0.00000
Paenibacillus sp. FSL P4-0081	1536769	S	6	8	14	0.00001
Paenibacillus sp. YPD9-1	2908839	S	6	1	7	0.00000
Paenibacillus sp. RC67	3039392	S	5	1	6	0.00000
Paenibacillus sp. R14(2021)	2859228	S	5	1	6	0.00000
Paenibacillus ihbetae	1870820	S	394	135	529	0.00028
Paenibacillus cellulositrophicus	562959	S	169	577	746	0.00040
Paenibacillus woosongensis	307580	S	98	53	151	0.00008
Paenibacillus antarcticus	253703	S	72	39	111	0.00006
Paenibacillus macerans	44252	S	48	38	86	0.00005
Paenibacillus crassostreae	1763538	S	42	17	59	0.00003
Paenibacillus konkukensis	2020716	S	41	14	55	0.00003
Paenibacillus odorifer	189426	S	31	24	55	0.00003
Paenibacillus amylolyticus	1451	S	23	125	148	0.00008
Paenibacillus naphthalenovorans	162209	S	19	30	49	0.00003
Paenibacillus baekrokdamisoli	1712516	S	18	5	23	0.00001
Paenibacillus andongensis	2975482	S	17	5	22	0.00001
Paenibacillus azoreducens	116718	S	11	5	16	0.00001
Paenibacillus brasilensis	128574	S	11	15	26	0.00001
Paenibacillus glucanolyticus	59843	S	9	217	226	0.00012
Paenibacillus barengoltzii	343517	S	8	781	789	0.00042
Paenibacillus rhizovicinus	2704463	S	7	2	9	0.00000
Paenibacillus polymyxa	1406	S	7	64	71	0.00004
Paenibacillus donghaensis	414771	S	6	1	7	0.00000
Paenibacillus tritici	1873425	S	6	2	8	0.00000
Paenibacillus xylanexedens	528191	S	5	53	58	0.00003
Paenibacillus lycopersici	2704462	S	5	1	6	0.00000
Paenibacillus marchantiae	3026433	S	5	10	15	0.00001
Brevibacillus sp. WF146	319501	S	288	185	473	0.00025
Brevibacillus sp. NSP2.1	3003229	S	32	466	498	0.00026
Brevibacillus sp. BB3-R1	2950604	S	13	6	19	0.00001
Brevibacillus sp. HD3.3A	2738979	S	5	48	53	0.00003
Brevibacillus agri	51101	S	214	2286	2500	0.00133
Brevibacillus marinus	2496837	S	115	42	157	0.00008
Brevibacillus composti	2796470	S	35	22	57	0.00003
Brevibacillus choshinensis	54911	S	13	10	23	0.00001
Cohnella abietis	2507935	S	11	29	40	0.00002
Cohnella sp. LGH	1619153	S	7	15	22	0.00001
Cohnella candidum	2674991	S	8	13	21	0.00001
Cohnella herbarum	2728023	S	5	17	22	0.00001
Candidatus Pristimantibacillus lignocellulolyticus	2994561	S	38	8	46	0.00002
Sporosarcina sp. resist	2762563	S	52	380	432	0.00023
Sporosarcina sp. Marseille-Q4063	2810514	S	31	9	40	0.00002
Sporosarcina psychrophila	1476	S	46	417	463	0.00025
Sporosarcina ureae	1571	S	11	8	19	0.00001
Sporosarcina thermotolerans	633404	S	7	5	12	0.00001
Ureibacillus thermosphaericus	51173	S	106	344	450	0.00024
Ureibacillus thermophilus	367743	S	8	6	14	0.00001
Solibacillus sp. R5-41	2048654	S	9	11	20	0.00001
Solibacillus silvestris	76853	S	9	23	32	0.00002
Staphylococcus capitis	29388	S	14	68	82	0.00004
Staphylococcus epidermidis	1282	S	5	29	34	0.00002
Jeotgalicoccus sp. WY2	2708346	S	12	8	20	0.00001
Alicyclobacillus acidoterrestris	1450	S	10	42	52	0.00003
Kyrpidia spormannii	2055160	S	7	2	9	0.00000
Gemella sanguinis	84135	S	14	17	31	0.00002
Streptococcus thermophilus	1308	S	80	321	401	0.00021
Streptococcus uberis	1349	S	19	63	82	0.00004
Streptococcus dysgalactiae	1334	S	17	104	121	0.00006
Lactococcus lactis	1358	S	108	3242	3350	0.00178
Romboutsia hominis	1507512	S	387	654	1041	0.00055
Romboutsia ilealis	1115758	S	293	807	1100	0.00058
Romboutsia sp. CE17	2724150	S	50	130	180	0.00010
Romboutsia sp. 13368	2708053	S	6	102	108	0.00006
Romboutsia sp. 13432	2708054	S	5	145	150	0.00008
Terrisporobacter glycolicus	36841	S	8	274	282	0.00015
Terrisporobacter hibernicus	2813371	S	5	154	159	0.00008
Paeniclostridium sordellii	1505	S	242	350	592	0.00031
Intestinibacter bartlettii	261299	S	26	44	70	0.00004
Clostridioides difficile	1496	S	20	41	61	0.00003
Clostridium perfringens	1502	S	457	2766	3223	0.00171
Clostridium estertheticum	238834	S	345	201	546	0.00029
Clostridium tagluense	360422	S	112	57	169	0.00009
Clostridium sp. CM027	2849865	S	7	76	83	0.00004
Clostridium sp. CF011	2843318	S	6	58	64	0.00003
Clostridium gelidum	704125	S	35	10	45	0.00002
Clostridium baratii	1561	S	33	20	53	0.00003
Clostridium felsineum	36839	S	14	5	19	0.00001
Clostridium gasigenes	94869	S	10	5	15	0.00001
Clostridium botulinum	1491	S	7	11	18	0.00001
Clostridium beijerinckii	1520	S	5	22	27	0.00001
Paraclostridium bifermentans	1490	S	46	86	132	0.00007
Hathewaya histolytica	1498	S	5	5	10	0.00001
Symbiobacterium thermophilum	2734	S	377	160	537	0.00029
Anaerocolumna sedimenticola	2696063	S	14	18	32	0.00002
Anaerocolumna chitinilytica	1727145	S	9	5	14	0.00001
Anaerocolumna sp. AGMB13025	3039116	S	7	6	13	0.00001
Roseburia intestinalis	166486	S	20	298	318	0.00017
Roseburia hominis	301301	S	14	69	83	0.00004
Lachnospiraceae bacterium GAM79	2109691	S	14	61	75	0.00004
Lachnospiraceae bacterium KGMB03038	2594789	S	5	15	20	0.00001
Anaerostipes hadrus	649756	S	18	79	97	0.00005
Lacrimispora xylanolytica	29375	S	11	6	17	0.00001
Blautia wexlerae	418240	S	5	23	28	0.00001
Anaerobutyricum hallii	39488	S	9	23	32	0.00002
Agathobacter rectalis	39491	S	7	190	197	0.00010
Simiaoa sunii	2763672	S	6	25	31	0.00002
Ruminiclostridium herbifermentans	2488810	S	9	20	29	0.00002
Acetivibrio thermocellus	1515	S	8	21	29	0.00002
Pseudoclostridium thermosuccinogenes	84032	S	8	9	17	0.00001
Oscillospiraceae bacterium	2485925	S	7	32	39	0.00002
Thermoclostridium stercorarium	1510	S	6	22	28	0.00001
Desulfitobacterium dichloroeliminans	233055	S	6	21	27	0.00001
Cellulosilyticum sp. WCF-2	2497860	S	26	16	42	0.00002
Thermaerobacter sp. FW80	2546351	S	5	2	7	0.00000
Clostridiales bacterium	1898207	S	8	318	326	0.00017
Syntrophomonas wolfei	863	S	5	1	6	0.00000
uncultured Clostridia bacterium	244328	S	5	82	87	0.00005
Turicibacter sanguinis	154288	S	1993	1153	3146	0.00167
Turicibacter bilis	2735723	S	36	163	199	0.00011
Pelosinus fermentans	365349	S	10	11	21	0.00001
Pelosinus sp. UFO1	484770	S	7	11	18	0.00001
Mycolicibacterium sp. YH-1	2908837	S	110	353	463	0.00025
Mycolicibacterium sp. TUM20985	3023370	S	8	23	31	0.00002
Mycolicibacterium helvum	1534349	S	108	660	768	0.00041
Mycolicibacterium rhodesiae	36814	S	98	2569	2667	0.00142
Mycolicibacterium sarraceniae	1534348	S	37	245	282	0.00015
Mycolicibacterium chitae	1792	S	18	226	244	0.00013
Mycolicibacterium holsaticum	152142	S	17	108	125	0.00007
Mycolicibacterium frederiksbergense	117567	S	14	567	581	0.00031
Mycolicibacterium aurum	1791	S	13	151	164	0.00009
Mycolicibacterium hassiacum	46351	S	11	182	193	0.00010
Mycolicibacterium vaccae	1810	S	10	102	112	0.00006
Mycolicibacterium fallax	1793	S	9	292	301	0.00016
Mycolicibacterium celeriflavum	1249101	S	6	120	126	0.00007
Mycolicibacterium rutilum	370526	S	6	181	187	0.00010
Mycolicibacterium arabiense	1286181	S	6	32	38	0.00002
Mycolicibacterium gadium	1794	S	6	256	262	0.00014
Mycolicibacterium sediminis	1286180	S	5	41	46	0.00002
Mycolicibacterium diernhoferi	1801	S	5	59	64	0.00003
Mycolicibacterium doricum	126673	S	5	76	81	0.00004
Mycolicibacterium confluentis	28047	S	5	28	33	0.00002
Mycolicibacterium baixiangningiae	2761578	S	5	35	40	0.00002
Mycobacterium sp. JS623	212767	S	12	55	67	0.00004
Mycobacterium sp. Aquia_216	2991729	S	11	229	240	0.00013
Mycobacterium sp. Aquia_213	2991728	S	11	496	507	0.00027
Mycobacterium sp. EPa45	1545728	S	5	116	121	0.00006
Mycobacterium shigaense	722731	S	6	106	112	0.00006
Mycobacterium cookii	1775	S	17	158	175	0.00009
Mycobacterium gallinarum	39689	S	12	641	653	0.00035
Candidatus Mycobacterium methanotrophicum	2943498	S	5	29	34	0.00002
Mycobacterium grossiae	1552759	S	5	142	147	0.00008
Mycolicibacter sp. MYC340	2855503	S	17	200	217	0.00012
Mycolicibacter sp. MYC098	2872309	S	8	73	81	0.00004
Mycolicibacter sp. MYC123	2855502	S	7	923	930	0.00049
Mycolicibacter minnesotensis	1118379	S	27	200	227	0.00012
Mycolicibacter terrae	1788	S	16	440	456	0.00024
Mycolicibacter heraklionensis	512402	S	13	423	436	0.00023
Mycolicibacter hiberniae	29314	S	5	49	54	0.00003
Rhodococcus sp. AQ5-07	2054902	S	20	1217	1237	0.00066
Rhodococcus sp. YL-1	1045808	S	18	2330	2348	0.00125
Rhodococcus sp. H-CA8f	1727214	S	11	721	732	0.00039
Rhodococcus sp. P1Y	1302308	S	8	8	16	0.00001
Rhodococcus globerulus	33008	S	3088	5016	8104	0.00430
Rhodococcus erythropolis	1833	S	164	4278	4442	0.00236
Rhodococcus qingshengii	334542	S	56	3516	3572	0.00190
Rhodococcus coprophilus	38310	S	13	30	43	0.00002
Rhodococcus fascians	1828	S	9	16	25	0.00001
Rhodococcus opacus	37919	S	5	18	23	0.00001
Nocardia sp. PE-7	3058426	S	541	1240	1781	0.00095
Nocardia mangyaensis	2213200	S	15	46	61	0.00003
Corynebacterium occultum	2675219	S	38	29	67	0.00004
Corynebacterium sanguinis	2594913	S	22	274	296	0.00016
Corynebacterium falsenii	108486	S	18	204	222	0.00012
Corynebacterium xerosis	1725	S	8	69	77	0.00004
Streptomyces sp. RPA4-2	2721244	S	72	440	512	0.00027
Streptomyces sp. HUAS 13-4	2981134	S	29	153	182	0.00010
Streptomyces sp. SAT1	1849967	S	23	174	197	0.00010
Streptomyces sp. VN1	1821625	S	10	1261	1271	0.00068
Streptomyces sp. Z423-1	2730915	S	10	63	73	0.00004
Streptomyces sp. x3	682314	S	7	0	7	0.00000
Streptomyces sp. NHF165	2175864	S	6	24	30	0.00002
Streptomyces sp.	1931	S	5	983	988	0.00052
Streptomyces sp. NEAU-sy36	2751189	S	5	42	47	0.00002
Streptomyces sp. FXJ1.172	710705	S	5	42	47	0.00002
Streptomyces albus	1888	S	208	8591	8799	0.00467
Streptomyces thermoviolaceus	1952	S	111	6838	6949	0.00369
Streptomyces thermocyaneoviolaceus	106355	S	31	588	619	0.00033
Streptomyces seoulensis	73044	S	25	204	229	0.00012
Streptomyces thermocarboxydus	59299	S	16	230	246	0.00013
Streptomyces xanthii	2768069	S	8	48	56	0.00003
Streptomyces thermodiastaticus	44061	S	5	1983	1988	0.00106
Streptomyces actuosus	1885	S	5	42	47	0.00002
Streptomyces calvus	67282	S	5	45	50	0.00003
Thermobispora bispora	2006	S	3227	12437	15664	0.00832
Streptosporangium sp. 'caverna'	2202249	S	730	2379	3109	0.00165
Streptosporangium roseum	2001	S	18	75	93	0.00005
Nonomuraea sp. ATCC 55076	1909395	S	52	447	499	0.00027
Nonomuraea phyllanthi	2219224	S	43	193	236	0.00013
Nonomuraea coxensis	404386	S	36	219	255	0.00014
Nonomuraea gerenzanensis	93944	S	33	303	336	0.00018
Nocardiopsis alba	53437	S	106	308	414	0.00022
Thermobifida fusca	2021	S	94	395	489	0.00026
Thermomonospora curvata	2020	S	50	243	293	0.00016
Actinomadura graeca	2750812	S	5	53	58	0.00003
Micromonospora sp. HM134	2583243	S	33	508	541	0.00029
Micromonospora sp. HUAS LYJ1	3061626	S	12	159	171	0.00009
Micromonospora sp. WMMD987	3016089	S	9	184	193	0.00010
Micromonospora sp. NBRC 110009	3061627	S	6	79	85	0.00005
Micromonospora zamorensis	709883	S	209	1872	2081	0.00111
Micromonospora narathiwatensis	299146	S	7	83	90	0.00005
Micromonospora inositola	47865	S	6	79	85	0.00005
Micromonospora maris	1003110	S	5	66	71	0.00004
Micromonospora carbonacea	47853	S	5	129	134	0.00007
Catellatospora sp. IY07-71	2728827	S	13	82	95	0.00005
Cryobacterium sp. SO2	1897060	S	6	34	40	0.00002
Cryobacterium sp. SO1	1897061	S	5	24	29	0.00002
Cryobacterium breve	1259258	S	25	95	120	0.00006
Cryobacterium arcticum	670052	S	18	178	196	0.00010
Cryobacterium soli	2220095	S	8	54	62	0.00003
Microbacterium sp. XT11	367477	S	24	204	228	0.00012
Leucobacter sp. NB 10	2873270	S	19	118	137	0.00007
Leucobacter allii	2932247	S	7	38	45	0.00002
Arthrobacter sp. PAMC25564	2565366	S	61	265	326	0.00017
Rothia dentocariosa	2047	S	21	58	79	0.00004
Pseudarthrobacter psychrotolerans	2697569	S	10	52	62	0.00003
Cellulomonas chengniuliangii	2968084	S	10	148	158	0.00008
Serinicoccus hydrothermalis	1758689	S	12	107	119	0.00006
Saccharopolyspora gregorii	33914	S	385	1774	2159	0.00115
Saccharomonospora viridis	1852	S	87	304	391	0.00021
Nocardioides sp. dk884	2662361	S	44	438	482	0.00026
Nocardioides sp. InS609-2	2760705	S	6	22	28	0.00001
Nocardioides panacis	2849501	S	29	191	220	0.00012
Cutibacterium acnes	1747	S	68	495	563	0.00030
Raineyella fluvialis	2662261	S	19	55	74	0.00004
Bifidobacterium pseudolongum	1694	S	6	29	35	0.00002
Pseudofrankia inefficax	298654	S	10	19	29	0.00002
Actinobacteria bacterium IMCC26256	1650658	S	13	1	14	0.00001
Capillimicrobium parvum	2884022	S	725	3179	3904	0.00207
Conexibacter woesei	191495	S	137	701	838	0.00045
Conexibacter sp. SYSU D00693	2812560	S	17	118	135	0.00007
Parviterribacteraceae bacterium J379	2898438	S	12	31	43	0.00002
Paraconexibacter antarcticus	2949664	S	8	25	33	0.00002
Miltoncostaea oceani	2843216	S	40	111	151	0.00008
Miltoncostaea marina	2843215	S	23	125	148	0.00008
Thermoleophilia bacterium SCSIO 60948	2730855	S	18	31	49	0.00003
Baekduia soli	496014	S	83	468	551	0.00029
Baekduia alba	2997333	S	22	138	160	0.00008
Rubrobacter tropicus	2653851	S	7	2	9	0.00000
Dermatobacter hominis	2884263	S	8	96	104	0.00006
uncultured Coriobacteriaceae bacterium	331632	S	8	4128	4136	0.00220
Ktedonobacteria bacterium brp13	2717365	S	99	55	154	0.00008
Ktedonosporobacter rubrisoli	2509675	S	10	6	16	0.00001
uncultured Dehalococcoidia bacterium	498747	S	14	4	18	0.00001
Dehalococcoidia bacterium	2026734	S	5	2	7	0.00000
uncultured Chloroflexota bacterium	166587	S	7	522	529	0.00028
Sphaerobacter thermophilus	2057	S	40	7	47	0.00002
Thermus thermophilus	274	S	5	22	27	0.00001
Oceanithermus profundus	187137	S	5	1	6	0.00000
Bradyrhizobium sp. PSBB068	2715960	S	1318	43565	44883	0.02384
Bradyrhizobium sp. 170	2782641	S	27	472	499	0.00027
Bradyrhizobium sp. NP1	3049772	S	26	498	524	0.00028
Bradyrhizobium sp. 186	2782654	S	10	175	185	0.00010
Bradyrhizobium sp. 200	2782665	S	8	125	133	0.00007
Bradyrhizobium sp. CCBAU 051011	858422	S	6	93	99	0.00005
Bradyrhizobium erythrophlei	1437360	S	183	1766	1949	0.00104
Bradyrhizobium sediminis	2840469	S	114	2499	2613	0.00139
Bradyrhizobium lablabi	722472	S	46	2881	2927	0.00155
Bradyrhizobium canariense	255045	S	24	1306	1330	0.00071
Bradyrhizobium betae	244734	S	15	3656	3671	0.00195
Bradyrhizobium japonicum	375	S	6	636	642	0.00034
Bradyrhizobium septentrionale	1404411	S	5	198	203	0.00011
Bradyrhizobium ottawaense	931866	S	5	1116	1121	0.00060
Nitrobacter hamburgensis	912	S	343	5937	6280	0.00334
Nitrobacter winogradskyi	913	S	8	337	345	0.00018
Afipia sp.	1871052	S	24	1967	1991	0.00106
Afipia sp. GAS231	1882747	S	6	261	267	0.00014
Rhodopseudomonas palustris	1076	S	15	572	587	0.00031
Rhodopseudomonas sp. P2A-2r	2991972	S	6	138	144	0.00008
Bradyrhizobiaceae bacterium	2072420	S	5	297	302	0.00016
Hyphomicrobium sp. ghe19	2682968	S	934	6371	7305	0.00388
Hyphomicrobium sp. DMF-1	3019544	S	23	244	267	0.00014
Hyphomicrobium sp. MC1	717785	S	11	886	897	0.00048
Hyphomicrobium denitrificans	53399	S	116	9037	9153	0.00486
Hyphomicrobium nitrativorans	1427356	S	8	104	112	0.00006
Rhodoplanes sp. Z2-YC6860	674703	S	153	2523	2676	0.00142
Methyloligella sp. GL2	2742204	S	12	233	245	0.00013
Mesorhizobium sp. AR10	2865839	S	12	527	539	0.00029
Mesorhizobium loti	381	S	10	2298	2308	0.00123
Phyllobacterium zundukense	1867719	S	8	84	92	0.00005
Pseudolabrys taiwanensis	331696	S	93	2487	2580	0.00137
Pseudolabrys sp. FHR47	2562284	S	82	2455	2537	0.00135
Xanthobacteraceae bacterium	2021379	S	7	315	322	0.00017
Rhizobium sp. TH2	2775403	S	5	150	155	0.00008
Enhydrobacter sp.	1894999	S	46	2703	2749	0.00146
Pseudorhodoplanes sinuspersici	1235591	S	9	96	105	0.00006
Microvirga ossetica	1882682	S	6	116	122	0.00006
Methylocystis rosea	173366	S	8	114	122	0.00006
Methylocapsa sp. D3K7	3041435	S	23	393	416	0.00022
Acidibrevibacterium fodinaquatile	1969806	S	5	363	368	0.00020
Skermanella rosea	1817965	S	5	260	265	0.00014
Rhodospirillales bacterium	2026786	S	13	396	409	0.00022
uncultured Alphaproteobacteria bacterium	91750	S	7	2167	2174	0.00115
Burkholderia cenocepacia	95486	S	80	31890	31970	0.01698
Burkholderia contaminans	488447	S	7	4706	4713	0.00250
Cupriavidus sp. WKF15	3032282	S	40	1183	1223	0.00065
Cupriavidus gilardii	82541	S	5	2740	2745	0.00146
Paraburkholderia phytofirmans	261302	S	8	185	193	0.00010
Polaromonas sp. P2-4	2895563	S	46	804	850	0.00045
Polaromonas sp. P1-6	2895564	S	45	690	735	0.00039
Polaromonas sp. P1(28)-13	2895561	S	33	436	469	0.00025
Polaromonas sp. JS666	296591	S	19	298	317	0.00017
Polaromonas sp. P1(28)-8	2895562	S	11	173	184	0.00010
Polaromonas naphthalenivorans	216465	S	6	224	230	0.00012
Variovorax sp. HW608	1034889	S	7	221	228	0.00012
Variovorax paradoxus	34073	S	9	854	863	0.00046
Rhodoferax sp. BAB1	2741720	S	6	223	229	0.00012
Rhodoferax sp. AJA081-3	2752316	S	5	22	27	0.00001
Rhodoferax ferrireducens	192843	S	12	39	51	0.00003
Rhodoferax sediminis	2509614	S	10	190	200	0.00011
Ramlibacter tataouinensis	94132	S	21	1051	1072	0.00057
Comamonadaceae bacterium OTU4NAUVB1	2952996	S	6	311	317	0.00017
Collimonas fungivorans	158899	S	6	303	309	0.00016
Glaciimonas sp. PAMC28666	2807626	S	5	91	96	0.00005
Piscinibacter sp. XHJ-5	3037797	S	61	1646	1707	0.00091
Paralcaligenes sp. KSB-10	2901142	S	5	55	60	0.00003
Burkholderiales bacterium	1891238	S	43	1486	1529	0.00081
Rhizobacter sp. AJA081-3	2753607	S	22	1278	1300	0.00069
Rhizobacter gummiphilus	946333	S	7	260	267	0.00014
Aquabacterium sp. J223	2898431	S	7	440	447	0.00024
Nitrosospira lacus	1288494	S	307	701	1008	0.00054
Nitrosospira briensis	35799	S	301	1788	2089	0.00111
Nitrosospira sp. NRS527	155925	S	245	1204	1449	0.00077
uncultured beta proteobacterium Rifle_16ft_4_minimus_10522	1665165	S	5	0	5	0.00000
Ferrigenium kumadai	1682490	S	60	1846	1906	0.00101
Candidatus Nitrotoga arctica	453162	S	5	12	17	0.00001
Gallionella capsiferriformans	370405	S	7	3632	3639	0.00193
Sulfuriferula plumbiphila	171865	S	27	914	941	0.00050
Sulfuricella denitrificans	649841	S	11	91	102	0.00005
Usitatibacter palustris	2732487	S	12	217	229	0.00012
Usitatibacter rugosus	2732067	S	11	239	250	0.00013
Rugosibacter aromaticivorans	1565605	S	5	523	528	0.00028
Methylotenera versatilis	1055487	S	5	16	21	0.00001
Nitrogeniibacter aestuarii	2815343	S	5	77	82	0.00004
Dechloromonas denitrificans	281362	S	21	361	382	0.00020
Betaproteobacteria bacterium	1891241	S	27	129	156	0.00008
Betaproteobacteria bacterium GR16-43	1904640	S	19	443	462	0.00025
Betaproteobacteria bacterium UKL13-2	1690485	S	7	33	40	0.00002
Crenobacter cavernae	2290923	S	7	397	404	0.00021
Candidatus Desulfobacillus denitrificans	2608985	S	14	690	704	0.00037
Candidatus Accumulibacter similis	2954388	S	5	422	427	0.00023
uncultured beta proteobacterium	86027	S	10	17739	17749	0.00943
Pseudomonas sp. KU26590	2991051	S	17	419	436	0.00023
Pseudomonas sp. MYb193	1827300	S	14	669	683	0.00036
Pseudomonas sp. SDM007	2812000	S	11	508	519	0.00028
Pseudomonas sp. DTU12.1	2654238	S	6	693	699	0.00037
Pseudomonas sp. FDAARGOS_380	2018067	S	5	421	426	0.00023
Pseudomonas lundensis	86185	S	44	910	954	0.00051
Pseudomonas fluorescens	294	S	9	784	793	0.00042
Pseudomonas proteolytica	219574	S	6	446	452	0.00024
Pseudomonas quebecensis	2995174	S	6	164	170	0.00009
Pseudomonas lurida	244566	S	6	591	597	0.00032
uncultured Pseudomonadales bacterium	332614	S	6	27	33	0.00002
Rhodanobacter sp. AS-Z3	3031330	S	10	370	380	0.00020
Buchnera aphidicola	9	S	323	549	872	0.00046
Arsenophonus endosymbiont of Aphis craccivora	1231049	S	23	295	318	0.00017
Rahnella inusitata	58169	S	20	127	147	0.00008
Acinetobacter sp. TTH0-4	1646498	S	125	7218	7343	0.00390
Psychrobacter sp. WB2	3043330	S	17	33	50	0.00003
Legionella pneumophila	446	S	5	77	82	0.00004
Legionella antarctica	2708020	S	5	9	14	0.00001
Methylobacter sp. YRD-M1	2911520	S	24	36	60	0.00003
Methylococcus geothermalis	2681310	S	10	126	136	0.00007
Sulfuricaulis limicola	1620215	S	17	224	241	0.00013
Sulfurifustis variabilis	1675686	S	15	151	166	0.00009
Steroidobacter denitrificans	465721	S	8	1263	1271	0.00068
uncultured Gammaproteobacteria bacterium	86473	S	7	926	933	0.00050
Acidithiobacillus ferriphilus	1689834	S	6	57	63	0.00003
uncultured bacterium	77133	S	2352	294248	296600	0.15752
uncultured soil bacterium	164851	S	143	15869	16012	0.00850
uncultured bacterium Rifle_16ft_4_minimus_37862	1665157	S	80	5	85	0.00005
uncultured bacterium contig00043	1181530	S	79	0	79	0.00004
uncultured bacterium contig00054	1181538	S	52	1	53	0.00003
uncultured bacterium contig00032	1181521	S	43	0	43	0.00002
uncultured bacterium 5G4	1701326	S	40	109	149	0.00008
uncultured bacterium contig00009	1181501	S	37	0	37	0.00002
uncultured bacterium contig00048	1181533	S	23	0	23	0.00001
uncultured bacterium F25-01	1191433	S	23	0	23	0.00001
uncultured bacterium contig00020	1239454	S	17	0	17	0.00001
uncultured bacterium contig00012	1239453	S	17	0	17	0.00001
uncultured bacterium 70	698392	S	16	50	66	0.00004
uncultured bacterium 270	698387	S	16	42	58	0.00003
uncultured bacterium ctg7180000001094	1425124	S	13	0	13	0.00001
uncultured bacterium 888	548896	S	11	0	11	0.00001
uncultured bacterium contig00001	1181493	S	10	3	13	0.00001
uncultured bacterium Rifle_16ft_4_minimus_19379	1665154	S	10	3	13	0.00001
uncultured bacterium ctg7180000000880	1424929	S	10	0	10	0.00001
uncultured bacterium ctg7180000001022	1425068	S	8	81	89	0.00005
uncultured bacterium W5-51b	1130999	S	6	11	17	0.00001
uncultured bacterium lac121	1447236	S	6	5	11	0.00001
uncultured bacterium 5G12	1701325	S	6	17	23	0.00001
uncultured bacterium 59	698390	S	6	20	26	0.00001
uncultured bacterium ctg7180000000927	1424975	S	5	25	30	0.00002
uncultured bacterium contig00047	1239459	S	5	0	5	0.00000
uncultured bacterium contig00035	1239456	S	5	0	5	0.00000
uncultured bacterium lac160	1447241	S	5	0	5	0.00000
Lacipirellula limnantheis	2528024	S	13	33	46	0.00002
Lacipirellula parvula	2650471	S	6	13	19	0.00001
Pirellulimonas nuda	2528009	S	6	103	109	0.00006
Frigoriglobus tundricola	2774151	S	7	48	55	0.00003
Urbifossiella limnaea	2528023	S	6	29	35	0.00002
Paludisphaera borealis	1387353	S	11	202	213	0.00011
Aquisphaera giovannonii	406548	S	8	92	100	0.00005
Planctomycetia bacterium	2052181	S	7	688	695	0.00037
Phycisphaerales bacterium	2052180	S	19	16	35	0.00002
Phycisphaeraceae bacterium	2026777	S	6	19	25	0.00001
Humisphaera borealis	2807512	S	6	3	9	0.00000
Planctomycetes bacterium Pla163	2528008	S	6	8	14	0.00001
Opitutus sp. GAS368	1882749	S	135	503	638	0.00034
Opitutus terrae	107709	S	29	81	110	0.00006
Lacunisphaera limnophila	1838286	S	32	137	169	0.00009
Nibricoccus aquaticus	2576891	S	15	19	34	0.00002
Opitutaceae bacterium TAV5	794903	S	10	39	49	0.00003
Ereboglobus luteus	1796921	S	5	18	23	0.00001
Fontisphaera persica	2974023	S	8	24	32	0.00002
Pedosphaera parvula	1032527	S	6	30	36	0.00002
Candidatus Protochlamydia naegleriophila	389348	S	10	47	57	0.00003
Parachlamydia acanthamoebae	83552	S	13	23	36	0.00002
Neochlamydia sp. S13	1353976	S	6	19	25	0.00001
Parachlamydiaceae bacterium	2052176	S	5	17	22	0.00001
Criblamydia sequanensis	340071	S	44	106	150	0.00008
Sorangium cellulosum	56	S	39	433	472	0.00025
Minicystis rosea	888845	S	25	88	113	0.00006
Polyangium aurulentum	2567896	S	14	115	129	0.00007
Labilithrix luteola	1391654	S	28	65	93	0.00005
Sandaracinus amylolyticus	927083	S	16	46	62	0.00003
Haliangium ochraceum	80816	S	23	28	51	0.00003
Nannocystis poenicansa	2995304	S	12	16	28	0.00001
Corallococcus macrosporus	35	S	8	116	124	0.00007
Pyxidicoccus parkwaysis	2813578	S	15	32	47	0.00002
Archangium violaceum	83451	S	63	147	210	0.00011
Stigmatella aurantiaca	41	S	9	36	45	0.00002
Anaeromyxobacter oryzae	2918170	S	19	45	64	0.00003
Myxococcales bacterium	2026763	S	9	5	14	0.00001
Geobacter sp. FeAm09	2597769	S	34	91	125	0.00007
Geobacter sp. SVR	2495594	S	29	186	215	0.00011
Geobacter benzoatilyticus	2815309	S	16	44	60	0.00003
Geobacter sulfurreducens	35554	S	11	183	194	0.00010
Geotalea uraniireducens	351604	S	49	128	177	0.00009
Trichlorobacter lovleyi	313985	S	18	143	161	0.00009
Trichlorobacter ammonificans	2916410	S	12	24	36	0.00002
Pelobacter propionicus	29543	S	24	270	294	0.00016
Alloacidobacterium dinghuense	2763107	S	25	6	31	0.00002
Terriglobus albidus	1592106	S	6	3	9	0.00000
Candidatus Koribacter versatilis	658062	S	11	247	258	0.00014
Granulicella mallensis	940614	S	5	3	8	0.00000
Acidisarcina polymorpha	2211140	S	7	30	37	0.00002
Occallatibacter riparius	1002689	S	7	2	9	0.00000
Paludibaculum fermentans	1473598	S	16	70	86	0.00005
Luteitalea pratensis	1855912	S	62	39	101	0.00005
Luteitalea sp. TBR-22	2802971	S	18	27	45	0.00002
uncultured Vicinamibacterales bacterium	3036250	S	22	21	43	0.00002
uncultured Acidobacteriota bacterium	171953	S	137	31795	31932	0.01696
uncultured Acidobacteria bacterium cosmid p2H8	470733	S	6	0	6	0.00000
Holophagales bacterium	2478486	S	8	0	8	0.00000
Panacibacter ginsenosidivorans	1813871	S	27	200	227	0.00012
Chryseolinea soli	2321403	S	12	70	82	0.00004
Gemmatirosa kalamazoonensis	861299	S	67	10	77	0.00004
Gemmatimonas groenlandica	2732249	S	17	8	25	0.00001
uncultured Gemmatimonas sp.	221169	S	12	2855	2867	0.00152
uncultured Gemmatimonadetes bacterium Rifle_16ft_4_minimus_37772	1665097	S	37	9	46	0.00002
Gemmatimonadota bacterium	2026742	S	32	8	40	0.00002
Nitrospira sp.	70125	S	89	65	154	0.00008
uncultured Nitrospira sp.	157176	S	27	2987	3014	0.00160
Nitrospira defluvii	330214	S	12	19	31	0.00002
Nitrospira moscoviensis	42253	S	11	24	35	0.00002
Candidatus Nitrospira kreftii	2652173	S	5	2	7	0.00000
Candidatus Manganitrophus sp.	2927580	S	20	6	26	0.00001
uncultured Nitrospirae bacterium Rifle_16ft_4_minimus_10340	1665123	S	58	0	58	0.00003
Candidatus Moranbacteria bacterium	2045217	S	19	31	50	0.00003
Candidatus Nomurabacteria bacterium	2052152	S	10	13	23	0.00001
Candidatus Methylomirabilis oxyfera	671143	S	20	6	26	0.00001
Arcobacter suis	1278212	S	20	120	140	0.00007
Elusimicrobiota bacterium	2030800	S	48	3	51	0.00003
Deltaproteobacteria bacterium	2026735	S	19	6	25	0.00001
uncultured delta proteobacterium Rifle_16ft_4_minimus_39832	1665182	S	6	1	7	0.00000
Leptospira sp. severe_002	2838237	S	7	7	14	0.00001
Methanobrevibacter smithii	2173	S	707	755	1462	0.00078
Methanobrevibacter millerae	230361	S	24	34	58	0.00003
Methanobrevibacter sp. YE315	1609968	S	11	4	15	0.00001
Methanobrevibacter ruminantium	83816	S	5	2	7	0.00000
Methanosphaera sp. BMS	1789762	S	14	2	16	0.00001
Methanosarcina lacustris	170861	S	8	13	21	0.00001
Candidatus Nitrosotalea devanaterra	1078905	S	15	328	343	0.00018
Candidatus Nitrosotalea okcheonensis	1903276	S	8	38	46	0.00002
uncultured crenarchaeote	29281	S	20	7254	7274	0.00386
uncultured archaeon	115547	S	84	14547	14631	0.00777
uncultured organism	155900	S	408	10991	11399	0.00605
uncultured prokaryote	198431	S	180	1448	1628	0.00086
uncultured microorganism	358574	S	7	61	68	0.00004
unidentified	32644	S	431	4695	5126	0.00272
Myoviridae sp. ctu2j3	2825197	S	500	0	500	0.00027
Caudoviricetes sp.	2832643	S	215	294	509	0.00027
Geobacillus virus E3	1572712	S	55	1	56	0.00003
Barrevirus sp.	2487763	S	38	0	38	0.00002
Potyvirus sp.	1955171	S	9	0	9	0.00000