name	taxonomy_id	taxonomy_lvl	kraken_assigned_reads	added_reads	new_est_reads	fraction_total_reads
Bos taurus	9913	S	38954	235043	273997	0.51031
Bos mutus	72004	S	6976	11199	18175	0.03385
Bos gaurus x Bos taurus	1705790	S	4292	103394	107686	0.20056
Bos indicus x Bos taurus	30522	S	1001	14823	15824	0.02947
Bos indicus	9915	S	729	18086	18815	0.03504
Bos grunniens	30521	S	5	184	189	0.00035
Bubalus carabanensis	346063	S	868	3085	3953	0.00736
Bubalus bubalis	89462	S	861	3060	3921	0.00730
Bison bison	9901	S	442	2310	2752	0.00513
Tragelaphus scriptus	66440	S	32	34	66	0.00012
Tragelaphus oryx	9945	S	18	10	28	0.00005
Ovis canadensis	37174	S	1906	1021	2927	0.00545
Ovis aries	9940	S	350	610	960	0.00179
Capra hircus	9925	S	93	210	303	0.00056
Budorcas taxicolor	37181	S	12	30	42	0.00008
Oryx dammah	59534	S	128	202	330	0.00061
Rangifer tarandus	9870	S	7588	9541	17129	0.03190
Odocoileus virginianus	9874	S	120	566	686	0.00128
Cervus elaphus	9860	S	5943	10811	16754	0.03120
Cervus canadensis	1574408	S	28	563	591	0.00110
Moschus berezovskii	68408	S	238	239	477	0.00089
Orcinus orca	9733	S	11	168	179	0.00033
Hyperoodon ampullatus	48744	S	7	31	38	0.00007
Balaenoptera acutorostrata	9767	S	26	196	222	0.00041
Sus scrofa	9823	S	155	28	183	0.00034
Canis lupus	9612	S	112	36	148	0.00028
Lutra lutra	9657	S	9	19	28	0.00005
Eptesicus nilssonii	59451	S	7	11	18	0.00003
Homo sapiens	9606	S	112	2575	2687	0.00500
Heterocephalus glaber	10181	S	7	16	23	0.00004
Kluyveromyces marxianus	4911	S	5	0	5	0.00001
Babesia ovata	189622	S	15	0	15	0.00003
Burkholderia cenocepacia	95486	S	518	6266	6784	0.01263
Burkholderia cepacia	292	S	35	93	128	0.00024
Burkholderia contaminans	488447	S	28	227	255	0.00047
Burkholderia stabilis	95485	S	8	13	21	0.00004
Burkholderia anthina	179879	S	7	13	20	0.00004
Burkholderia vietnamiensis	60552	S	6	50	56	0.00010
Burkholderia sp. EMB26	2854261	S	21	617	638	0.00119
Bradyrhizobium sp. PSBB068	2715960	S	4146	556	4702	0.00876
Bradyrhizobium sp. BTAi1	288000	S	15	0	15	0.00003
Bradyrhizobium betae	244734	S	77	116	193	0.00036
Afipia sp.	1871052	S	81	14	95	0.00018
Asticcacaulis excentricus	78587	S	17	5	22	0.00004
Brevundimonas sp. DS20	1532555	S	5	11	16	0.00003
Pseudomonas sp. MYb193	1827300	S	35	128	163	0.00030
Pseudomonas sp. DTU12.1	2654238	S	31	264	295	0.00055
Pseudomonas sp. LG1D9	2083054	S	12	96	108	0.00020
Pseudomonas sp. J380	2605424	S	10	50	60	0.00011
Pseudomonas sp. SDM007	2812000	S	7	14	21	0.00004
Pseudomonas sp. So3.2b	2864101	S	6	112	118	0.00022
Pseudomonas lundensis	86185	S	56	24	80	0.00015
Pseudomonas fragi	296	S	6	17	23	0.00004
Pseudomonas proteolytica	219574	S	8	30	38	0.00007
Pseudomonas fluorescens	294	S	5	21	26	0.00005
Pseudomonas citronellolis	53408	S	5	20	25	0.00005
Pseudomonas psychrophila	122355	S	7	4	11	0.00002
Pseudomonas lurida	244566	S	5	45	50	0.00009
Acinetobacter sp. TTH0-4	1646498	S	57	61	118	0.00022
Alcanivorax sp.	1872427	S	11	4	15	0.00003
Geobacillus stearothermophilus	1422	S	1325	5915	7240	0.01348
Geobacillus lituanicus	169283	S	21	200	221	0.00041
Geobacillus thermoleovorans	33941	S	20	243	263	0.00049
[Bacillus] caldolyticus	1394	S	18	271	289	0.00054
Geobacillus kaustophilus	1462	S	9	123	132	0.00025
Geobacillus thermocatenulatus	33938	S	6	7	13	0.00002
Geobacillus sp. LC300	1519377	S	14	125	139	0.00026
Geobacillus sp. JS12	1813182	S	12	40	52	0.00010
Geobacillus sp. E263	391290	S	11	40	51	0.00009
Geobacillus sp. CX412	2973804	S	6	39	45	0.00008
Geobacillus sp. GHH01	1233873	S	5	64	69	0.00013
Geobacillus thermodenitrificans	33940	S	26	186	212	0.00039
Geobacillus zalihae	213419	S	20	175	195	0.00036
Geobacillus genomosp. 3	1921421	S	10	2	12	0.00002
Geobacillus subterraneus	129338	S	6	3	9	0.00002
Anoxybacillus flavithermus	33934	S	3078	3588	6666	0.01242
Anoxybacillus gonensis	198467	S	9	32	41	0.00008
Anoxybacillus amylolyticus	294699	S	8	1	9	0.00002
Anoxybacillus ayderensis	265546	S	7	17	24	0.00004
Neobacillus thermocopriae	1215031	S	129	205	334	0.00062
Parageobacillus toebii	153151	S	14	120	134	0.00025
Parageobacillus thermoglucosidasius	1426	S	5	3	8	0.00001
Bacillus methanolicus	1471	S	11	3	14	0.00003
Streptococcus thermophilus	1308	S	118	115	233	0.00043
Streptococcus uberis	1349	S	21	33	54	0.00010
Streptococcus dysgalactiae	1334	S	17	74	91	0.00017
Lactococcus lactis	1358	S	26	200	226	0.00042
Lactococcus raffinolactis	1366	S	5	2	7	0.00001
Corynebacterium falsenii	108486	S	23	23	46	0.00009
Corynebacterium xerosis	1725	S	11	13	24	0.00004
Cutibacterium acnes	1747	S	41	66	107	0.00020
Trueperella pyogenes	1661	S	7	2	9	0.00002
Bifidobacterium pseudolongum	1694	S	5	2	7	0.00001
Thermus thermophilus	274	S	20	24	44	0.00008
Myoviridae sp. ctu2j3	2825197	S	1963	0	1963	0.00366
Caudoviricetes sp.	2832643	S	289	708	997	0.00186
Geobacillus virus E3	1572712	S	25	1	26	0.00005
Mogiana tick virus	1172985	S	22	3	25	0.00005
uncultured organism	155900	S	378	13220	13598	0.02533