name	taxonomy_id	taxonomy_lvl	kraken_assigned_reads	added_reads	new_est_reads	fraction_total_reads
Bos taurus	9913	S	34558	85747	120305	0.44442
Bos mutus	72004	S	5625	3576	9201	0.03399
Bos gaurus x Bos taurus	1705790	S	5605	56812	62417	0.23058
Bos indicus x Bos taurus	30522	S	1111	5660	6771	0.02501
Bos indicus	9915	S	860	7376	8236	0.03042
Bos grunniens	30521	S	5	89	94	0.00035
Bubalus bubalis	89462	S	687	786	1473	0.00544
Bubalus carabanensis	346063	S	648	746	1394	0.00515
Bison bison	9901	S	307	509	816	0.00301
Tragelaphus scriptus	66440	S	48	26	74	0.00027
Tragelaphus oryx	9945	S	6	1	7	0.00003
Tragelaphus strepsiceros	9946	S	5	1	6	0.00002
Ovis canadensis	37174	S	2507	412	2919	0.01078
Ovis aries	9940	S	348	241	589	0.00218
Capra hircus	9925	S	86	67	153	0.00057
Budorcas taxicolor	37181	S	15	13	28	0.00010
Oryx dammah	59534	S	125	64	189	0.00070
Rangifer tarandus	9870	S	11490	5111	16601	0.06133
Odocoileus virginianus	9874	S	99	162	261	0.00096
Cervus elaphus	9860	S	9587	6185	15772	0.05826
Cervus canadensis	1574408	S	32	229	261	0.00096
Moschus berezovskii	68408	S	241	65	306	0.00113
Orcinus orca	9733	S	43	282	325	0.00120
Lagenorhynchus albirostris	27610	S	9	45	54	0.00020
Hyperoodon ampullatus	48744	S	70	76	146	0.00054
Delphinapterus leucas	9749	S	11	114	125	0.00046
Phocoena sinus	42100	S	7	71	78	0.00029
Neophocaena asiaeorientalis	189058	S	5	71	76	0.00028
Physeter catodon	9755	S	10	30	40	0.00015
Balaenoptera acutorostrata	9767	S	110	223	333	0.00123
Balaenoptera musculus	9771	S	6	42	48	0.00018
Hippopotamus amphibius	9833	S	16	3	19	0.00007
Sus scrofa	9823	S	360	23	383	0.00141
Phacochoerus africanus	41426	S	7	1	8	0.00003
Camelus bactrianus	9837	S	5	9	14	0.00005
Canis lupus	9612	S	342	48	390	0.00144
Lutra lutra	9657	S	36	30	66	0.00024
Meles meles	9662	S	20	11	31	0.00011
Felis catus	9685	S	10	16	26	0.00010
Pipistrellus pipistrellus	59474	S	13	25	38	0.00014
Pipistrellus pygmaeus	246814	S	5	9	14	0.00005
Eptesicus nilssonii	59451	S	18	24	42	0.00016
Erinaceus europaeus	9365	S	6	0	6	0.00002
Homo sapiens	9606	S	720	4519	5239	0.01935
Pan troglodytes	9598	S	14	45	59	0.00022
Macaca mulatta	9544	S	9	15	24	0.00009
Microcebus murinus	30608	S	10	6	16	0.00006
Mus musculus	10090	S	14	25	39	0.00014
Chionomys nivalis	269649	S	6	11	17	0.00006
Heterocephalus glaber	10181	S	17	10	27	0.00010
Sylvilagus floridanus	9988	S	11	2	13	0.00005
Gallus gallus	9031	S	10	12	22	0.00008
Cyprinus carpio	7962	S	27	46	73	0.00027
Euphydryas editha	104508	S	35	1231	1266	0.00468
Babesia ovata	189622	S	104	1	105	0.00039
Geobacillus stearothermophilus	1422	S	1100	2483	3583	0.01324
Geobacillus thermoleovorans	33941	S	25	161	186	0.00069
Geobacillus thermocatenulatus	33938	S	21	11	32	0.00012
Geobacillus lituanicus	169283	S	19	96	115	0.00042
[Bacillus] caldolyticus	1394	S	16	132	148	0.00055
Geobacillus kaustophilus	1462	S	7	52	59	0.00022
Geobacillus sp. LC300	1519377	S	14	69	83	0.00031
Geobacillus sp. GHH01	1233873	S	7	51	58	0.00021
Geobacillus sp. 12AMOR1	1629723	S	6	23	29	0.00011
Geobacillus sp. JS12	1813182	S	6	11	17	0.00006
Geobacillus sp. CX412	2973804	S	5	23	28	0.00010
Geobacillus sp. Y412MC52	550542	S	5	18	23	0.00008
Geobacillus thermodenitrificans	33940	S	30	103	133	0.00049
Geobacillus subterraneus	129338	S	18	5	23	0.00008
Geobacillus genomosp. 3	1921421	S	18	2	20	0.00007
Geobacillus zalihae	213419	S	17	79	96	0.00035
Anoxybacillus flavithermus	33934	S	1793	914	2707	0.01000
Anoxybacillus ayderensis	265546	S	9	11	20	0.00007
Anoxybacillus gonensis	198467	S	7	11	18	0.00007
Anoxybacillus amylolyticus	294699	S	7	0	7	0.00003
Neobacillus thermocopriae	1215031	S	102	84	186	0.00069
Parageobacillus toebii	153151	S	9	39	48	0.00018
Parageobacillus caldoxylosilyticus	81408	S	6	17	23	0.00008
Bacillus methanolicus	1471	S	12	1	13	0.00005
Streptococcus thermophilus	1308	S	70	24	94	0.00035
Streptococcus dysgalactiae	1334	S	13	12	25	0.00009
Streptococcus uberis	1349	S	11	5	16	0.00006
Streptococcus infantarius	102684	S	7	10	17	0.00006
Lactococcus lactis	1358	S	21	147	168	0.00062
Corynebacterium falsenii	108486	S	14	25	39	0.00014
Cutibacterium acnes	1747	S	37	33	70	0.00026
Thermus thermophilus	274	S	9	7	16	0.00006
Burkholderia cenocepacia	95486	S	163	963	1126	0.00416
Burkholderia cepacia	292	S	20	28	48	0.00018
Burkholderia sp. EMB26	2854261	S	6	79	85	0.00031
Ralstonia insidiosa	190721	S	7	1	8	0.00003
Pseudomonas sp. MYb193	1827300	S	45	108	153	0.00057
Pseudomonas sp. SDM007	2812000	S	20	23	43	0.00016
Pseudomonas sp. DTU12.1	2654238	S	13	97	110	0.00041
Pseudomonas sp. LG1D9	2083054	S	9	63	72	0.00027
Pseudomonas sp. NIBR-H-19	2901380	S	8	2	10	0.00004
Pseudomonas sp. J380	2605424	S	6	18	24	0.00009
Pseudomonas lundensis	86185	S	36	5	41	0.00015
Pseudomonas fragi	296	S	5	6	11	0.00004
Pseudomonas proteolytica	219574	S	11	18	29	0.00011
Pseudomonas fluorescens	294	S	6	11	17	0.00006
Pseudomonas aeruginosa	287	S	5	72	77	0.00028
Pseudomonas psychrophila	122355	S	5	1	6	0.00002
Acinetobacter sp. TTH0-4	1646498	S	44	28	72	0.00027
Bradyrhizobium sp. PSBB068	2715960	S	17	12	29	0.00011
Myoviridae sp. ctu2j3	2825197	S	299	0	299	0.00110
Caudoviricetes sp.	2832643	S	63	27	90	0.00033
Geobacillus virus E3	1572712	S	25	0	25	0.00009
Mogiana tick virus	1172985	S	14	0	14	0.00005
uncultured organism	155900	S	269	2545	2814	0.01040
synthetic construct	32630	S	12	294	306	0.00113