name	taxonomy_id	taxonomy_lvl	kraken_assigned_reads	added_reads	new_est_reads	fraction_total_reads
Zingiber officinale	94328	S	11869130	34242	11903372	0.99577
Musa acuminata	4641	S	49	0	49	0.00000
Triticum aestivum	4565	S	84	437	521	0.00004
Triticum dicoccoides	85692	S	81	353	434	0.00004
Triticum urartu	4572	S	36	105	141	0.00001
Aegilops tauschii	37682	S	40	252	292	0.00002
Hordeum vulgare	4513	S	142	389	531	0.00004
Lolium rigidum	89674	S	196	489	685	0.00006
Lolium perenne	4522	S	168	683	851	0.00007
Brachypodium distachyon	15368	S	49	89	138	0.00001
Oryza brachyantha	4533	S	33	82	115	0.00001
Oryza sativa	4530	S	13	112	125	0.00001
Oryza glaberrima	4538	S	5	33	38	0.00000
Panicum virgatum	38727	S	87	151	238	0.00002
Panicum hallii	206008	S	62	99	161	0.00001
Setaria italica	4555	S	23	127	150	0.00001
Zea mays	4577	S	84	243	327	0.00003
Sorghum bicolor	4558	S	29	45	74	0.00001
Ananas comosus	4615	S	109	56	165	0.00001
Elaeis guineensis	51953	S	213	13	226	0.00002
Phoenix dactylifera	42345	S	31	4	35	0.00000
Asparagus officinalis	4686	S	109	0	109	0.00001
Dioscorea cayenensis	29710	S	62	0	62	0.00001
Vigna radiata	157791	S	310	662	972	0.00008
Vigna angularis	3914	S	48	117	165	0.00001
Vigna unguiculata	3917	S	46	276	322	0.00003
Glycine soja	3848	S	14	228	242	0.00002
Glycine max	3847	S	7	159	166	0.00001
Cajanus cajan	3821	S	63	175	238	0.00002
Phaseolus vulgaris	3885	S	55	97	152	0.00001
Pisum sativum	3888	S	490	390	880	0.00007
Medicago truncatula	3880	S	47	197	244	0.00002
Trifolium pratense	57577	S	47	564	611	0.00005
Cicer arietinum	3827	S	59	435	494	0.00004
Lotus japonicus	34305	S	33	223	256	0.00002
Arachis duranensis	130453	S	47	570	617	0.00005
Arachis stenosperma	217475	S	28	183	211	0.00002
Arachis hypogaea	3818	S	9	174	183	0.00002
Arachis ipaensis	130454	S	7	414	421	0.00004
Lupinus angustifolius	3871	S	57	138	195	0.00002
Malus domestica	3750	S	48	155	203	0.00002
Malus sylvestris	3752	S	8	70	78	0.00001
Prunus mume	102107	S	17	112	129	0.00001
Prunus persica	3760	S	11	67	78	0.00001
Prunus dulcis	3755	S	7	43	50	0.00000
Fragaria vesca	57918	S	25	170	195	0.00002
Potentilla anserina	57926	S	13	94	107	0.00001
Rosa chinensis	74649	S	24	22	46	0.00000
Cannabis sativa	3483	S	52	104	156	0.00001
Ziziphus jujuba	326968	S	49	238	287	0.00002
Hevea brasiliensis	3981	S	99	206	305	0.00003
Manihot esculenta	3983	S	39	167	206	0.00002
Mercurialis annua	3986	S	34	412	446	0.00004
Ricinus communis	3988	S	27	186	213	0.00002
Populus trichocarpa	3694	S	39	145	184	0.00002
Benincasa hispida	102211	S	79	105	184	0.00002
Cucumis melo	3656	S	30	2411	2441	0.00020
Cucumis sativus	3659	S	21	60	81	0.00001
Cucurbita pepo	3663	S	111	476	587	0.00005
Juglans regia	51240	S	45	365	410	0.00003
Juglans microcarpa x Juglans regia	2249226	S	19	88	107	0.00001
Carya illinoinensis	32201	S	39	200	239	0.00002
Quercus lobata	97700	S	25	217	242	0.00002
Quercus robur	38942	S	22	336	358	0.00003
Tripterygium wilfordii	458696	S	13	112	125	0.00001
Theobroma cacao	3641	S	1277	1586	2863	0.00024
Gossypium hirsutum	3635	S	52	214	266	0.00002
Gossypium raimondii	29730	S	44	234	278	0.00002
Gossypium arboreum	29729	S	22	101	123	0.00001
Camelina sativa	90675	S	261	306	567	0.00005
Arabidopsis thaliana	3702	S	11	68	79	0.00001
Brassica oleracea	3712	S	85	713	798	0.00007
Brassica napus	3708	S	13	714	727	0.00006
Brassica rapa	3711	S	9	182	191	0.00002
Raphanus sativus	3726	S	28	2217	2245	0.00019
Eucalyptus grandis	71139	S	57	89	146	0.00001
Rhodamnia argentea	178133	S	9	24	33	0.00000
Punica granatum	22663	S	18	65	83	0.00001
Mangifera indica	29780	S	39	120	159	0.00001
Citrus sinensis	2711	S	20	159	179	0.00001
Vitis vinifera	29760	S	36	505	541	0.00005
Vitis riparia	96939	S	26	332	358	0.00003
Solanum pennellii	28526	S	3517	3158	6675	0.00056
Solanum lycopersicum	4081	S	54	117	171	0.00001
Solanum dulcamara	45834	S	73	420	493	0.00004
Solanum stenotomum	172797	S	55	63	118	0.00001
Capsicum annuum	4072	S	317	225	542	0.00005
Nicotiana attenuata	49451	S	117	304	421	0.00004
Ipomoea triloba	35885	S	60	296	356	0.00003
Olea europaea	4146	S	359	446	805	0.00007
Salvia splendens	180675	S	75	151	226	0.00002
Salvia miltiorrhiza	226208	S	30	43	73	0.00001
Salvia hispanica	49212	S	22	55	77	0.00001
Sesamum indicum	4182	S	25	90	115	0.00001
Coffea arabica	13443	S	26	56	82	0.00001
Coffea eugenioides	49369	S	6	38	44	0.00000
Lactuca sativa	4236	S	402	841	1243	0.00010
Helianthus annuus	4232	S	160	163	323	0.00003
Erigeron canadensis	72917	S	43	107	150	0.00001
Cynara cardunculus	4265	S	78	102	180	0.00002
Daucus carota	4039	S	154	332	486	0.00004
Impatiens glandulifera	253017	S	78	133	211	0.00002
Actinidia eriantha	165200	S	62	113	175	0.00001
Diospyros lotus	55363	S	48	58	106	0.00001
Rhododendron vialii	182163	S	33	48	81	0.00001
Beta vulgaris	161934	S	62	77	139	0.00001
Spinacia oleracea	3562	S	51	6033	6084	0.00051
Amaranthus tricolor	29722	S	36	292	328	0.00003
Malania oleifera	397392	S	98	123	221	0.00002
Macadamia integrifolia	60698	S	122	8	130	0.00001
Telopea speciosissima	54955	S	83	5	88	0.00001
Papaver somniferum	3469	S	176	0	176	0.00001
Magnolia sinica	86752	S	137	0	137	0.00001
Nymphaea colorata	210225	S	32	1	33	0.00000
Physcomitrium patens	3218	S	97	0	97	0.00001
Micromonas commoda	296587	S	340	106	446	0.00004
Ostreococcus tauri	70448	S	54	24	78	0.00001
Ostreococcus sp. 'lucimarinus'	242159	S	14	6	20	0.00000
Bathycoccus prasinos	41875	S	15	3	18	0.00000
Chlamydomonas reinhardtii	3055	S	363	29	392	0.00003
Cyanidioschyzon merolae	45157	S	14	0	14	0.00000